data_4RYN # _model_server_result.job_id msLDkLENQoEsuVdY0UajBw _model_server_result.datetime_utc '2024-11-23 12:09:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ryn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":210}' # _entry.id 4RYN # _exptl.entry_id 4RYN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-ALPHA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RYN _cell.length_a 33.614 _cell.length_b 49.377 _cell.length_c 97.852 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RYN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMU _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-ALPHA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMU sing 204 n n C1B O1B LMU sing 205 n n C1B O5B LMU sing 206 n n C1B H1B LMU sing 207 n n C2B C3B LMU sing 208 n n C2B O2B LMU sing 209 n n C2B H2B LMU sing 210 n n C3B C4B LMU sing 211 n n C3B O3B LMU sing 212 n n C3B H3B LMU sing 213 n n C4B C5B LMU sing 214 n n C4B O4' LMU sing 215 n n C4B H4B LMU sing 216 n n C5B C6B LMU sing 217 n n C5B O5B LMU sing 218 n n C5B H5B LMU sing 219 n n C6B O6B LMU sing 220 n n C6B "H6'2" LMU sing 221 n n C6B "H6'1" LMU sing 222 n n O1B C4' LMU sing 223 n n O2B H2O1 LMU sing 224 n n O3B H3O1 LMU sing 225 n n O4' H4O1 LMU sing 226 n n O6B H6B LMU sing 227 n n C1' C2' LMU sing 228 n n C1' O1' LMU sing 229 n n C1' O5' LMU sing 230 n n C1' H1' LMU sing 231 n n C2' C3' LMU sing 232 n n C2' O2' LMU sing 233 n n C2' H2' LMU sing 234 n n C3' C4' LMU sing 235 n n C3' O3' LMU sing 236 n n C3' H3' LMU sing 237 n n C4' C5' LMU sing 238 n n C4' H4' LMU sing 239 n n C5' C6' LMU sing 240 n n C5' O5' LMU sing 241 n n C5' H5' LMU sing 242 n n C6' O6' LMU sing 243 n n C6' H6D LMU sing 244 n n C6' H6E LMU sing 245 n n O1' C1 LMU sing 246 n n O2' H2O2 LMU sing 247 n n O3' H3O2 LMU sing 248 n n O6' H6' LMU sing 249 n n C1 C2 LMU sing 250 n n C1 H12 LMU sing 251 n n C1 H11 LMU sing 252 n n C2 C3 LMU sing 253 n n C2 H22 LMU sing 254 n n C2 H21 LMU sing 255 n n C3 C4 LMU sing 256 n n C3 H32 LMU sing 257 n n C3 H31 LMU sing 258 n n C4 C5 LMU sing 259 n n C4 H42 LMU sing 260 n n C4 H41 LMU sing 261 n n C5 C6 LMU sing 262 n n C5 H52 LMU sing 263 n n C5 H51 LMU sing 264 n n C6 C7 LMU sing 265 n n C6 H62 LMU sing 266 n n C6 H61 LMU sing 267 n n C7 C8 LMU sing 268 n n C7 H72 LMU sing 269 n n C7 H71 LMU sing 270 n n C8 C9 LMU sing 271 n n C8 H82 LMU sing 272 n n C8 H81 LMU sing 273 n n C9 C10 LMU sing 274 n n C9 H92 LMU sing 275 n n C9 H91 LMU sing 276 n n C10 C11 LMU sing 277 n n C10 H102 LMU sing 278 n n C10 H101 LMU sing 279 n n C11 C12 LMU sing 280 n n C11 H112 LMU sing 281 n n C11 H111 LMU sing 282 n n C12 H123 LMU sing 283 n n C12 H122 LMU sing 284 n n C12 H121 LMU sing 285 n n # _atom_sites.entry_id 4RYN _atom_sites.fract_transf_matrix[1][1] 0.02975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020252 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MPG A 1 201 2 MPG MPG . C 2 MPG A 1 202 3 MPG MPG . D 2 MPG A 1 203 5 MPG MPG . E 2 MPG A 1 204 8 MPG MPG . F 2 MPG A 1 205 9 MPG MPG . G 2 MPG A 1 206 10 MPG MPG . H 2 MPG A 1 207 11 MPG MPG . I 2 MPG A 1 208 12 MPG MPG . J 2 MPG A 1 209 14 MPG MPG . K 3 LMU A 1 210 1 LMU LMU . L 4 CAC A 1 211 1 CAC CAC . M 5 PGE A 1 212 1 PGE PGE . N 6 HOH A 1 301 1 HOH HOH . N 6 HOH A 2 302 2 HOH HOH . N 6 HOH A 3 303 3 HOH HOH . N 6 HOH A 4 304 4 HOH HOH . N 6 HOH A 5 305 5 HOH HOH . N 6 HOH A 6 306 6 HOH HOH . N 6 HOH A 7 307 7 HOH HOH . N 6 HOH A 8 308 8 HOH HOH . N 6 HOH A 9 309 9 HOH HOH . N 6 HOH A 10 310 10 HOH HOH . N 6 HOH A 11 311 11 HOH HOH . N 6 HOH A 12 312 12 HOH HOH . N 6 HOH A 13 313 13 HOH HOH . N 6 HOH A 14 314 14 HOH HOH . N 6 HOH A 15 315 15 HOH HOH . N 6 HOH A 16 316 16 HOH HOH . N 6 HOH A 17 317 17 HOH HOH . N 6 HOH A 18 318 18 HOH HOH . N 6 HOH A 19 319 19 HOH HOH . N 6 HOH A 20 320 21 HOH HOH . N 6 HOH A 21 321 22 HOH HOH . N 6 HOH A 22 322 23 HOH HOH . N 6 HOH A 23 323 24 HOH HOH . N 6 HOH A 24 324 25 HOH HOH . N 6 HOH A 25 325 26 HOH HOH . N 6 HOH A 26 326 27 HOH HOH . N 6 HOH A 27 327 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMU . . . K 3 33.371 -2.561 -3.291 1 38.07 ? C1B LMU 210 A 1 HETATM 2 C C2B LMU . . . K 3 32.918 -3.998 -3.195 1 39.08 ? C2B LMU 210 A 1 HETATM 3 C C3B LMU . . . K 3 33.441 -4.643 -1.966 1 41.1 ? C3B LMU 210 A 1 HETATM 4 C C4B LMU . . . K 3 34.929 -4.532 -1.875 1 45.79 ? C4B LMU 210 A 1 HETATM 5 C C5B LMU . . . K 3 35.358 -3.086 -1.998 1 41.01 ? C5B LMU 210 A 1 HETATM 6 C C6B LMU . . . K 3 36.851 -2.976 -1.944 1 39.98 ? C6B LMU 210 A 1 HETATM 7 O O1B LMU . . . K 3 32.874 -1.876 -2.186 1 41.18 ? O1B LMU 210 A 1 HETATM 8 O O2B LMU . . . K 3 31.475 -4.056 -3.196 1 50.75 ? O2B LMU 210 A 1 HETATM 9 O O3B LMU . . . K 3 33.066 -6.048 -1.943 1 54.5 ? O3B LMU 210 A 1 HETATM 10 O O4' LMU . . . K 3 35.386 -5.057 -0.617 1 42.61 ? O4' LMU 210 A 1 HETATM 11 O O5B LMU . . . K 3 34.864 -2.504 -3.25 1 37.18 ? O5B LMU 210 A 1 HETATM 12 O O6B LMU . . . K 3 37.207 -1.61 -2.014 1 41.98 ? O6B LMU 210 A 1 HETATM 13 C C1' LMU . . . K 3 32.287 2.076 -3.607 1 37.96 ? C1' LMU 210 A 1 HETATM 14 C C2' LMU . . . K 3 33.492 1.783 -2.762 1 39.25 ? C2' LMU 210 A 1 HETATM 15 C C3' LMU . . . K 3 33.804 0.331 -2.741 1 41.83 ? C3' LMU 210 A 1 HETATM 16 C C4' LMU . . . K 3 32.576 -0.458 -2.437 1 43.1 ? C4' LMU 210 A 1 HETATM 17 C C5' LMU . . . K 3 31.548 -0.293 -3.526 1 48.32 ? C5' LMU 210 A 1 HETATM 18 C C6' LMU . . . K 3 30.2 -0.126 -2.887 1 54.84 ? C6' LMU 210 A 1 HETATM 19 O O1' LMU . . . K 3 32.587 3.134 -4.485 1 40.99 ? O1' LMU 210 A 1 HETATM 20 O O2' LMU . . . K 3 34.641 2.511 -3.264 1 29.4 ? O2' LMU 210 A 1 HETATM 21 O O3' LMU . . . K 3 34.82 0.077 -1.74 1 37.82 ? O3' LMU 210 A 1 HETATM 22 O O5' LMU . . . K 3 31.82 0.887 -4.38 1 47.54 ? O5' LMU 210 A 1 HETATM 23 O O6' LMU . . . K 3 29.19 -0.434 -3.82 1 57.26 ? O6' LMU 210 A 1 HETATM 24 C C1 LMU . . . K 3 31.58 3.366 -5.524 1 42.94 ? C1 LMU 210 A 1 HETATM 25 C C2 LMU . . . K 3 32.061 4.518 -6.453 1 40.83 ? C2 LMU 210 A 1 HETATM 26 C C3 LMU . . . K 3 32.45 3.95 -7.832 1 38.35 ? C3 LMU 210 A 1 HETATM 27 C C4 LMU . . . K 3 33.718 4.664 -8.351 1 28.59 ? C4 LMU 210 A 1 HETATM 28 C C5 LMU . . . K 3 33.695 4.707 -9.924 1 34.92 ? C5 LMU 210 A 1 HETATM 29 C C6 LMU . . . K 3 34.904 5.509 -10.433 1 28.45 ? C6 LMU 210 A 1 HETATM 30 C C7 LMU . . . K 3 34.541 6.187 -11.798 1 27.78 ? C7 LMU 210 A 1 HETATM 31 C C8 LMU . . . K 3 35.549 7.298 -12.103 1 29.85 ? C8 LMU 210 A 1 HETATM 32 C C9 LMU . . . K 3 35.056 8.126 -13.306 1 30.56 ? C9 LMU 210 A 1 HETATM 33 C C10 LMU . . . K 3 35.926 9.373 -13.456 1 34.82 ? C10 LMU 210 A 1 HETATM 34 C C11 LMU . . . K 3 35.331 10.276 -14.529 1 33.39 ? C11 LMU 210 A 1 HETATM 35 C C12 LMU . . . K 3 36.294 11.424 -14.823 1 30.86 ? C12 LMU 210 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 35 #