data_4RYO
#
_model_server_result.job_id            9W3yjLAsv6ttJJ7Sf1eOQQ 
_model_server_result.datetime_utc      '2024-11-14 06:01:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ryo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":214}' 
#
_entry.id    4RYO 
#
_exptl.entry_id    4RYO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4RYO 
_cell.length_a            28.839 
_cell.length_b            54.639 
_cell.length_c            107.368 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RYO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     4RYO 
_atom_sites.fract_transf_matrix[1][1]    0.034675 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018302 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009314 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MPG A 1 201 1 MPG MPG . 
C 2 MPG A 1 202 5 MPG MPG . 
D 2 MPG A 1 203 6 MPG MPG . 
E 2 MPG A 1 204 7 MPG MPG . 
F 2 MPG A 1 205 8 MPG MPG . 
G 2 MPG A 1 206 9 MPG MPG . 
H 2 MPG A 1 207 10 MPG MPG . 
I 2 MPG A 1 208 11 MPG MPG . 
J 2 MPG A 1 209 12 MPG MPG . 
K 2 MPG A 1 210 13 MPG MPG . 
L 2 MPG A 1 211 14 MPG MPG . 
M 3 DMS A 1 212 1 DMS DMS . 
N 3 DMS A 1 213 3 DMS DMS . 
O 3 DMS A 1 214 5 DMS DMS . 
P 3 DMS A 1 215 6 DMS DMS . 
Q 4 HOH A 1 301 1 HOH HOH . 
Q 4 HOH A 2 302 2 HOH HOH . 
Q 4 HOH A 3 303 3 HOH HOH . 
Q 4 HOH A 4 304 4 HOH HOH . 
Q 4 HOH A 5 305 5 HOH HOH . 
Q 4 HOH A 6 306 6 HOH HOH . 
Q 4 HOH A 7 307 7 HOH HOH . 
Q 4 HOH A 8 308 8 HOH HOH . 
Q 4 HOH A 9 309 9 HOH HOH . 
Q 4 HOH A 10 310 10 HOH HOH . 
Q 4 HOH A 11 311 11 HOH HOH . 
Q 4 HOH A 12 312 12 HOH HOH . 
Q 4 HOH A 13 313 13 HOH HOH . 
Q 4 HOH A 14 314 14 HOH HOH . 
Q 4 HOH A 15 315 15 HOH HOH . 
Q 4 HOH A 16 316 16 HOH HOH . 
Q 4 HOH A 17 317 17 HOH HOH . 
Q 4 HOH A 18 318 18 HOH HOH . 
Q 4 HOH A 19 319 19 HOH HOH . 
Q 4 HOH A 20 320 20 HOH HOH . 
Q 4 HOH A 21 321 22 HOH HOH . 
Q 4 HOH A 22 322 23 HOH HOH . 
Q 4 HOH A 23 323 24 HOH HOH . 
Q 4 HOH A 24 324 25 HOH HOH . 
Q 4 HOH A 25 325 29 HOH HOH . 
Q 4 HOH A 26 326 32 HOH HOH . 
Q 4 HOH A 27 327 33 HOH HOH . 
Q 4 HOH A 28 328 34 HOH HOH . 
Q 4 HOH A 29 329 35 HOH HOH . 
Q 4 HOH A 30 330 36 HOH HOH . 
Q 4 HOH A 31 331 47 HOH HOH . 
Q 4 HOH A 32 332 48 HOH HOH . 
Q 4 HOH A 33 333 52 HOH HOH . 
Q 4 HOH A 34 334 54 HOH HOH . 
Q 4 HOH A 35 335 55 HOH HOH . 
Q 4 HOH A 36 336 56 HOH HOH . 
Q 4 HOH A 37 337 57 HOH HOH . 
Q 4 HOH A 38 338 58 HOH HOH . 
Q 4 HOH A 39 339 59 HOH HOH . 
Q 4 HOH A 40 340 60 HOH HOH . 
Q 4 HOH A 41 341 61 HOH HOH . 
Q 4 HOH A 42 342 62 HOH HOH . 
Q 4 HOH A 43 343 63 HOH HOH . 
Q 4 HOH A 44 344 64 HOH HOH . 
Q 4 HOH A 45 345 68 HOH HOH . 
Q 4 HOH A 46 346 69 HOH HOH . 
Q 4 HOH A 47 347 70 HOH HOH . 
Q 4 HOH A 48 348 71 HOH HOH . 
Q 4 HOH A 49 349 72 HOH HOH . 
Q 4 HOH A 50 350 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . O 3 14.122 12.531 43.076 1 51.52 ? S DMS 214 A 1 
HETATM 2 O O DMS . . . O 3 12.892 11.692 43.236 1 51 ? O DMS 214 A 1 
HETATM 3 C C1 DMS . . . O 3 14.879 12.171 41.479 1 24.89 ? C1 DMS 214 A 1 
HETATM 4 C C2 DMS . . . O 3 13.679 14.266 42.814 1 26.93 ? C2 DMS 214 A 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#