data_4RZE # _model_server_result.job_id I4KoJKYcQmez6L82bOePqA _model_server_result.datetime_utc '2024-11-09 02:43:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rze # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 4RZE # _exptl.entry_id 4RZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RZE _cell.length_a 74.266 _cell.length_b 76.893 _cell.length_c 128.518 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4RZE _atom_sites.fract_transf_matrix[1][1] 0.013465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007781 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 301 301 GOL GOL . D 2 GOL A 1 301 301 GOL GOL . E 2 GOL A 1 302 302 GOL GOL . F 3 HOH B 1 401 3 HOH HOH . F 3 HOH B 2 402 4 HOH HOH . F 3 HOH B 3 403 6 HOH HOH . F 3 HOH B 4 404 9 HOH HOH . F 3 HOH B 5 405 10 HOH HOH . F 3 HOH B 6 406 12 HOH HOH . F 3 HOH B 7 407 13 HOH HOH . F 3 HOH B 8 408 15 HOH HOH . F 3 HOH B 9 409 16 HOH HOH . F 3 HOH B 10 410 17 HOH HOH . F 3 HOH B 11 411 19 HOH HOH . F 3 HOH B 12 412 20 HOH HOH . F 3 HOH B 13 413 27 HOH HOH . F 3 HOH B 14 414 29 HOH HOH . F 3 HOH B 15 415 32 HOH HOH . F 3 HOH B 16 416 40 HOH HOH . F 3 HOH B 17 417 41 HOH HOH . F 3 HOH B 18 418 44 HOH HOH . F 3 HOH B 19 419 45 HOH HOH . F 3 HOH B 20 420 48 HOH HOH . F 3 HOH B 21 421 50 HOH HOH . F 3 HOH B 22 422 56 HOH HOH . F 3 HOH B 23 423 58 HOH HOH . F 3 HOH B 24 424 59 HOH HOH . F 3 HOH B 25 425 60 HOH HOH . F 3 HOH B 26 426 61 HOH HOH . F 3 HOH B 27 427 65 HOH HOH . F 3 HOH B 28 428 66 HOH HOH . F 3 HOH B 29 429 78 HOH HOH . F 3 HOH B 30 430 81 HOH HOH . F 3 HOH B 31 431 83 HOH HOH . F 3 HOH B 32 432 84 HOH HOH . F 3 HOH B 33 433 90 HOH HOH . F 3 HOH B 34 434 96 HOH HOH . F 3 HOH B 35 435 99 HOH HOH . F 3 HOH B 36 436 101 HOH HOH . F 3 HOH B 37 437 103 HOH HOH . F 3 HOH B 38 438 107 HOH HOH . F 3 HOH B 39 439 109 HOH HOH . F 3 HOH B 40 440 111 HOH HOH . F 3 HOH B 41 441 113 HOH HOH . F 3 HOH B 42 442 114 HOH HOH . F 3 HOH B 43 443 116 HOH HOH . F 3 HOH B 44 444 126 HOH HOH . F 3 HOH B 45 445 131 HOH HOH . F 3 HOH B 46 446 133 HOH HOH . F 3 HOH B 47 447 135 HOH HOH . F 3 HOH B 48 448 136 HOH HOH . F 3 HOH B 49 449 139 HOH HOH . F 3 HOH B 50 450 143 HOH HOH . F 3 HOH B 51 451 145 HOH HOH . F 3 HOH B 52 452 146 HOH HOH . F 3 HOH B 53 453 154 HOH HOH . F 3 HOH B 54 454 156 HOH HOH . F 3 HOH B 55 455 158 HOH HOH . F 3 HOH B 56 456 159 HOH HOH . F 3 HOH B 57 457 160 HOH HOH . F 3 HOH B 58 458 163 HOH HOH . F 3 HOH B 59 459 164 HOH HOH . F 3 HOH B 60 460 165 HOH HOH . F 3 HOH B 61 461 177 HOH HOH . F 3 HOH B 62 462 185 HOH HOH . F 3 HOH B 63 463 195 HOH HOH . F 3 HOH B 64 464 199 HOH HOH . F 3 HOH B 65 465 206 HOH HOH . F 3 HOH B 66 466 210 HOH HOH . F 3 HOH B 67 467 211 HOH HOH . F 3 HOH B 68 468 212 HOH HOH . F 3 HOH B 69 469 213 HOH HOH . F 3 HOH B 70 470 214 HOH HOH . F 3 HOH B 71 471 218 HOH HOH . F 3 HOH B 72 472 219 HOH HOH . F 3 HOH B 73 473 220 HOH HOH . F 3 HOH B 74 474 223 HOH HOH . F 3 HOH B 75 475 225 HOH HOH . F 3 HOH B 76 476 227 HOH HOH . F 3 HOH B 77 477 229 HOH HOH . F 3 HOH B 78 478 230 HOH HOH . F 3 HOH B 79 479 231 HOH HOH . F 3 HOH B 80 480 242 HOH HOH . F 3 HOH B 81 481 244 HOH HOH . F 3 HOH B 82 482 254 HOH HOH . F 3 HOH B 83 483 258 HOH HOH . F 3 HOH B 84 484 261 HOH HOH . F 3 HOH B 85 485 264 HOH HOH . F 3 HOH B 86 486 267 HOH HOH . F 3 HOH B 87 487 268 HOH HOH . F 3 HOH B 88 488 272 HOH HOH . F 3 HOH B 89 489 273 HOH HOH . F 3 HOH B 90 490 275 HOH HOH . F 3 HOH B 91 491 277 HOH HOH . F 3 HOH B 92 492 278 HOH HOH . F 3 HOH B 93 493 279 HOH HOH . F 3 HOH B 94 494 282 HOH HOH . F 3 HOH B 95 495 286 HOH HOH . F 3 HOH B 96 496 293 HOH HOH . F 3 HOH B 97 497 295 HOH HOH . F 3 HOH B 98 498 296 HOH HOH . F 3 HOH B 99 499 298 HOH HOH . F 3 HOH B 100 500 303 HOH HOH . F 3 HOH B 101 501 304 HOH HOH . F 3 HOH B 102 502 306 HOH HOH . F 3 HOH B 103 503 310 HOH HOH . F 3 HOH B 104 504 311 HOH HOH . F 3 HOH B 105 505 314 HOH HOH . G 3 HOH A 1 401 1 HOH HOH . G 3 HOH A 2 402 2 HOH HOH . G 3 HOH A 3 403 5 HOH HOH . G 3 HOH A 4 404 7 HOH HOH . G 3 HOH A 5 405 8 HOH HOH . G 3 HOH A 6 406 11 HOH HOH . G 3 HOH A 7 407 14 HOH HOH . G 3 HOH A 8 408 18 HOH HOH . G 3 HOH A 9 409 22 HOH HOH . G 3 HOH A 10 410 23 HOH HOH . G 3 HOH A 11 411 26 HOH HOH . G 3 HOH A 12 412 30 HOH HOH . G 3 HOH A 13 413 31 HOH HOH . G 3 HOH A 14 414 34 HOH HOH . G 3 HOH A 15 415 35 HOH HOH . G 3 HOH A 16 416 36 HOH HOH . G 3 HOH A 17 417 39 HOH HOH . G 3 HOH A 18 418 42 HOH HOH . G 3 HOH A 19 419 46 HOH HOH . G 3 HOH A 20 420 49 HOH HOH . G 3 HOH A 21 421 51 HOH HOH . G 3 HOH A 22 422 53 HOH HOH . G 3 HOH A 23 423 54 HOH HOH . G 3 HOH A 24 424 55 HOH HOH . G 3 HOH A 25 425 57 HOH HOH . G 3 HOH A 26 426 68 HOH HOH . G 3 HOH A 27 427 69 HOH HOH . G 3 HOH A 28 428 70 HOH HOH . G 3 HOH A 29 429 71 HOH HOH . G 3 HOH A 30 430 72 HOH HOH . G 3 HOH A 31 431 73 HOH HOH . G 3 HOH A 32 432 75 HOH HOH . G 3 HOH A 33 433 76 HOH HOH . G 3 HOH A 34 434 77 HOH HOH . G 3 HOH A 35 435 79 HOH HOH . G 3 HOH A 36 436 85 HOH HOH . G 3 HOH A 37 437 87 HOH HOH . G 3 HOH A 38 438 88 HOH HOH . G 3 HOH A 39 439 92 HOH HOH . G 3 HOH A 40 440 93 HOH HOH . G 3 HOH A 41 441 94 HOH HOH . G 3 HOH A 42 442 95 HOH HOH . G 3 HOH A 43 443 97 HOH HOH . G 3 HOH A 44 444 100 HOH HOH . G 3 HOH A 45 445 105 HOH HOH . G 3 HOH A 46 446 106 HOH HOH . G 3 HOH A 47 447 110 HOH HOH . G 3 HOH A 48 448 112 HOH HOH . G 3 HOH A 49 449 115 HOH HOH . G 3 HOH A 50 450 117 HOH HOH . G 3 HOH A 51 451 124 HOH HOH . G 3 HOH A 52 452 125 HOH HOH . G 3 HOH A 53 453 130 HOH HOH . G 3 HOH A 54 454 134 HOH HOH . G 3 HOH A 55 455 137 HOH HOH . G 3 HOH A 56 456 141 HOH HOH . G 3 HOH A 57 457 147 HOH HOH . G 3 HOH A 58 458 152 HOH HOH . G 3 HOH A 59 459 153 HOH HOH . G 3 HOH A 60 460 157 HOH HOH . G 3 HOH A 61 461 167 HOH HOH . G 3 HOH A 62 462 169 HOH HOH . G 3 HOH A 63 463 174 HOH HOH . G 3 HOH A 64 464 178 HOH HOH . G 3 HOH A 65 465 179 HOH HOH . G 3 HOH A 66 466 181 HOH HOH . G 3 HOH A 67 467 182 HOH HOH . G 3 HOH A 68 468 186 HOH HOH . G 3 HOH A 69 469 190 HOH HOH . G 3 HOH A 70 470 191 HOH HOH . G 3 HOH A 71 471 192 HOH HOH . G 3 HOH A 72 472 193 HOH HOH . G 3 HOH A 73 473 196 HOH HOH . G 3 HOH A 74 474 198 HOH HOH . G 3 HOH A 75 475 204 HOH HOH . G 3 HOH A 76 476 215 HOH HOH . G 3 HOH A 77 477 216 HOH HOH . G 3 HOH A 78 478 234 HOH HOH . G 3 HOH A 79 479 235 HOH HOH . G 3 HOH A 80 480 238 HOH HOH . G 3 HOH A 81 481 240 HOH HOH . G 3 HOH A 82 482 243 HOH HOH . G 3 HOH A 83 483 252 HOH HOH . G 3 HOH A 84 484 253 HOH HOH . G 3 HOH A 85 485 266 HOH HOH . G 3 HOH A 86 486 269 HOH HOH . G 3 HOH A 87 487 270 HOH HOH . G 3 HOH A 88 488 274 HOH HOH . G 3 HOH A 89 489 276 HOH HOH . G 3 HOH A 90 490 280 HOH HOH . G 3 HOH A 91 491 281 HOH HOH . G 3 HOH A 92 492 283 HOH HOH . G 3 HOH A 93 493 284 HOH HOH . G 3 HOH A 94 494 285 HOH HOH . G 3 HOH A 95 495 287 HOH HOH . G 3 HOH A 96 496 288 HOH HOH . G 3 HOH A 97 497 289 HOH HOH . G 3 HOH A 98 498 290 HOH HOH . G 3 HOH A 99 499 299 HOH HOH . G 3 HOH A 100 500 300 HOH HOH . G 3 HOH A 101 501 301 HOH HOH . G 3 HOH A 102 502 302 HOH HOH . G 3 HOH A 103 503 305 HOH HOH . G 3 HOH A 104 504 307 HOH HOH . G 3 HOH A 105 505 308 HOH HOH . G 3 HOH A 106 506 312 HOH HOH . G 3 HOH A 107 507 313 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 15.518 -18.914 4.354 1 48.53 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . D 2 16.321 -18.451 5.458 1 47.62 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . D 2 14.415 -19.808 4.888 1 46.21 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . D 2 14.208 -20.933 4.059 1 47.02 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . D 2 13.059 -19.146 4.852 1 45.71 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . D 2 12.131 -20.203 5.129 1 45.35 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #