data_4RZG # _model_server_result.job_id n0bT8Jwp1-wEqnLjJ9zv0g _model_server_result.datetime_utc '2024-11-04 23:22:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rzg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4RZG # _exptl.entry_id 4RZG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RZG _cell.length_a 74.228 _cell.length_b 76.529 _cell.length_c 128.677 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RZG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4RZG _atom_sites.fract_transf_matrix[1][1] 0.013472 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013067 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL B 1 301 301 GOL GOL . D 2 GOL A 1 301 301 GOL GOL . E 2 GOL A 1 302 302 GOL GOL . F 3 ZHN A 1 303 1 ZHN ZHN . G 4 HOH B 1 401 5 HOH HOH . G 4 HOH B 2 402 11 HOH HOH . G 4 HOH B 3 403 13 HOH HOH . G 4 HOH B 4 404 16 HOH HOH . G 4 HOH B 5 405 18 HOH HOH . G 4 HOH B 6 406 21 HOH HOH . G 4 HOH B 7 407 24 HOH HOH . G 4 HOH B 8 408 25 HOH HOH . G 4 HOH B 9 409 28 HOH HOH . G 4 HOH B 10 410 29 HOH HOH . G 4 HOH B 11 411 30 HOH HOH . G 4 HOH B 12 412 34 HOH HOH . G 4 HOH B 13 413 38 HOH HOH . G 4 HOH B 14 414 40 HOH HOH . G 4 HOH B 15 415 42 HOH HOH . G 4 HOH B 16 416 44 HOH HOH . G 4 HOH B 17 417 47 HOH HOH . G 4 HOH B 18 418 49 HOH HOH . G 4 HOH B 19 419 53 HOH HOH . G 4 HOH B 20 420 57 HOH HOH . G 4 HOH B 21 421 59 HOH HOH . G 4 HOH B 22 422 60 HOH HOH . G 4 HOH B 23 423 63 HOH HOH . G 4 HOH B 24 424 67 HOH HOH . G 4 HOH B 25 425 68 HOH HOH . G 4 HOH B 26 426 69 HOH HOH . G 4 HOH B 27 427 76 HOH HOH . G 4 HOH B 28 428 78 HOH HOH . G 4 HOH B 29 429 81 HOH HOH . G 4 HOH B 30 430 84 HOH HOH . G 4 HOH B 31 431 85 HOH HOH . G 4 HOH B 32 432 89 HOH HOH . G 4 HOH B 33 433 90 HOH HOH . G 4 HOH B 34 434 93 HOH HOH . G 4 HOH B 35 435 95 HOH HOH . G 4 HOH B 36 436 96 HOH HOH . G 4 HOH B 37 437 97 HOH HOH . G 4 HOH B 38 438 103 HOH HOH . G 4 HOH B 39 439 105 HOH HOH . G 4 HOH B 40 440 109 HOH HOH . G 4 HOH B 41 441 112 HOH HOH . G 4 HOH B 42 442 119 HOH HOH . G 4 HOH B 43 443 121 HOH HOH . G 4 HOH B 44 444 122 HOH HOH . G 4 HOH B 45 445 125 HOH HOH . G 4 HOH B 46 446 129 HOH HOH . G 4 HOH B 47 447 130 HOH HOH . G 4 HOH B 48 448 131 HOH HOH . G 4 HOH B 49 449 132 HOH HOH . G 4 HOH B 50 450 134 HOH HOH . G 4 HOH B 51 451 139 HOH HOH . G 4 HOH B 52 452 142 HOH HOH . G 4 HOH B 53 453 144 HOH HOH . G 4 HOH B 54 454 146 HOH HOH . G 4 HOH B 55 455 150 HOH HOH . G 4 HOH B 56 456 152 HOH HOH . G 4 HOH B 57 457 156 HOH HOH . G 4 HOH B 58 458 159 HOH HOH . G 4 HOH B 59 459 163 HOH HOH . G 4 HOH B 60 460 164 HOH HOH . G 4 HOH B 61 461 165 HOH HOH . G 4 HOH B 62 462 166 HOH HOH . G 4 HOH B 63 463 167 HOH HOH . G 4 HOH B 64 464 168 HOH HOH . G 4 HOH B 65 465 175 HOH HOH . H 4 HOH A 1 401 1 HOH HOH . H 4 HOH A 2 402 2 HOH HOH . H 4 HOH A 3 403 3 HOH HOH . H 4 HOH A 4 404 4 HOH HOH . H 4 HOH A 5 405 6 HOH HOH . H 4 HOH A 6 406 7 HOH HOH . H 4 HOH A 7 407 8 HOH HOH . H 4 HOH A 8 408 10 HOH HOH . H 4 HOH A 9 409 12 HOH HOH . H 4 HOH A 10 410 17 HOH HOH . H 4 HOH A 11 411 27 HOH HOH . H 4 HOH A 12 412 32 HOH HOH . H 4 HOH A 13 413 33 HOH HOH . H 4 HOH A 14 414 36 HOH HOH . H 4 HOH A 15 415 39 HOH HOH . H 4 HOH A 16 416 41 HOH HOH . H 4 HOH A 17 417 43 HOH HOH . H 4 HOH A 18 418 50 HOH HOH . H 4 HOH A 19 419 51 HOH HOH . H 4 HOH A 20 420 52 HOH HOH . H 4 HOH A 21 421 54 HOH HOH . H 4 HOH A 22 422 55 HOH HOH . H 4 HOH A 23 423 56 HOH HOH . H 4 HOH A 24 424 58 HOH HOH . H 4 HOH A 25 425 61 HOH HOH . H 4 HOH A 26 426 62 HOH HOH . H 4 HOH A 27 427 64 HOH HOH . H 4 HOH A 28 428 65 HOH HOH . H 4 HOH A 29 429 66 HOH HOH . H 4 HOH A 30 430 71 HOH HOH . H 4 HOH A 31 431 72 HOH HOH . H 4 HOH A 32 432 73 HOH HOH . H 4 HOH A 33 433 75 HOH HOH . H 4 HOH A 34 434 79 HOH HOH . H 4 HOH A 35 435 80 HOH HOH . H 4 HOH A 36 436 88 HOH HOH . H 4 HOH A 37 437 91 HOH HOH . H 4 HOH A 38 438 92 HOH HOH . H 4 HOH A 39 439 102 HOH HOH . H 4 HOH A 40 440 113 HOH HOH . H 4 HOH A 41 441 114 HOH HOH . H 4 HOH A 42 442 117 HOH HOH . H 4 HOH A 43 443 118 HOH HOH . H 4 HOH A 44 444 120 HOH HOH . H 4 HOH A 45 445 123 HOH HOH . H 4 HOH A 46 446 124 HOH HOH . H 4 HOH A 47 447 126 HOH HOH . H 4 HOH A 48 448 127 HOH HOH . H 4 HOH A 49 449 128 HOH HOH . H 4 HOH A 50 450 133 HOH HOH . H 4 HOH A 51 451 135 HOH HOH . H 4 HOH A 52 452 136 HOH HOH . H 4 HOH A 53 453 137 HOH HOH . H 4 HOH A 54 454 138 HOH HOH . H 4 HOH A 55 455 140 HOH HOH . H 4 HOH A 56 456 141 HOH HOH . H 4 HOH A 57 457 143 HOH HOH . H 4 HOH A 58 458 145 HOH HOH . H 4 HOH A 59 459 147 HOH HOH . H 4 HOH A 60 460 148 HOH HOH . H 4 HOH A 61 461 149 HOH HOH . H 4 HOH A 62 462 151 HOH HOH . H 4 HOH A 63 463 153 HOH HOH . H 4 HOH A 64 464 154 HOH HOH . H 4 HOH A 65 465 155 HOH HOH . H 4 HOH A 66 466 157 HOH HOH . H 4 HOH A 67 467 158 HOH HOH . H 4 HOH A 68 468 160 HOH HOH . H 4 HOH A 69 469 161 HOH HOH . H 4 HOH A 70 470 162 HOH HOH . H 4 HOH A 71 471 169 HOH HOH . H 4 HOH A 72 472 172 HOH HOH . H 4 HOH A 73 473 173 HOH HOH . H 4 HOH A 74 474 174 HOH HOH . H 4 HOH A 75 475 176 HOH HOH . H 4 HOH A 76 476 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 5.773 -24.135 -48.489 1 48.27 ? C1 GOL 301 B 1 HETATM 2 O O1 GOL . . . C 2 4.864 -25.161 -48.905 1 47.78 ? O1 GOL 301 B 1 HETATM 3 C C2 GOL . . . C 2 5.589 -23.967 -46.98 1 47.1 ? C2 GOL 301 B 1 HETATM 4 O O2 GOL . . . C 2 6.206 -25.093 -46.334 1 46.24 ? O2 GOL 301 B 1 HETATM 5 C C3 GOL . . . C 2 6.183 -22.656 -46.47 1 42.91 ? C3 GOL 301 B 1 HETATM 6 O O3 GOL . . . C 2 5.831 -22.448 -45.097 1 41.05 ? O3 GOL 301 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #