data_4S2J # _model_server_result.job_id 4IMf41RltzJ3ZCnTUA_9VQ _model_server_result.datetime_utc '2024-11-05 03:50:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4s2j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 4S2J # _exptl.entry_id 4S2J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 267.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4S2J _cell.length_a 64.05 _cell.length_b 108.1 _cell.length_c 162.81 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4S2J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 PISA monomeric 1 software_defined_assembly 4 PISA monomeric 1 software_defined_assembly 5 PISA monomeric 1 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,H,I,L 1 1 B,C,F,G,J,K 2 1 A,E,I 3 1 B,F,J 4 1 C,G,K 5 1 D,H,L 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 70 A SER 70 1_555 E CAN NXL . A NXL 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 B OG SER 70 B SER 70 1_555 F CAN NXL . B NXL 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale3 D OG SER 70 D SER 70 1_555 H CAN NXL . D NXL 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 C OG SER 70 C SER 70 1_555 G CAN NXL . C NXL 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C7 H13 N3 O6 S' _chem_comp.formula_weight 267.26 _chem_comp.id NXL _chem_comp.mon_nstd_flag . _chem_comp.name (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'avibactam, bound form, NXL104, bound form' # _atom_sites.entry_id 4S2J _atom_sites.fract_transf_matrix[1][1] 0.015613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006142 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NXL A 1 301 301 NXL NXL . F 2 NXL B 1 301 301 NXL NXL . G 2 NXL C 1 301 301 NXL NXL . H 2 NXL D 1 301 301 NXL NXL . I 3 HOH A 1 401 401 HOH HOH . I 3 HOH A 2 402 402 HOH HOH . I 3 HOH A 3 403 403 HOH HOH . I 3 HOH A 4 404 404 HOH HOH . I 3 HOH A 5 405 405 HOH HOH . I 3 HOH A 6 406 406 HOH HOH . I 3 HOH A 7 407 407 HOH HOH . I 3 HOH A 8 408 408 HOH HOH . I 3 HOH A 9 409 409 HOH HOH . I 3 HOH A 10 410 410 HOH HOH . I 3 HOH A 11 411 411 HOH HOH . I 3 HOH A 12 412 412 HOH HOH . I 3 HOH A 13 413 413 HOH HOH . I 3 HOH A 14 414 414 HOH HOH . I 3 HOH A 15 415 415 HOH HOH . I 3 HOH A 16 416 416 HOH HOH . I 3 HOH A 17 417 417 HOH HOH . I 3 HOH A 18 418 418 HOH HOH . I 3 HOH A 19 419 419 HOH HOH . I 3 HOH A 20 420 420 HOH HOH . I 3 HOH A 21 421 421 HOH HOH . I 3 HOH A 22 422 422 HOH HOH . I 3 HOH A 23 423 423 HOH HOH . I 3 HOH A 24 424 424 HOH HOH . I 3 HOH A 25 425 425 HOH HOH . I 3 HOH A 26 426 426 HOH HOH . I 3 HOH A 27 427 428 HOH HOH . I 3 HOH A 28 428 429 HOH HOH . I 3 HOH A 29 429 430 HOH HOH . I 3 HOH A 30 430 431 HOH HOH . I 3 HOH A 31 431 432 HOH HOH . I 3 HOH A 32 432 433 HOH HOH . I 3 HOH A 33 433 434 HOH HOH . I 3 HOH A 34 434 435 HOH HOH . I 3 HOH A 35 435 436 HOH HOH . I 3 HOH A 36 436 437 HOH HOH . I 3 HOH A 37 437 438 HOH HOH . I 3 HOH A 38 438 439 HOH HOH . I 3 HOH A 39 439 440 HOH HOH . I 3 HOH A 40 440 441 HOH HOH . I 3 HOH A 41 441 442 HOH HOH . I 3 HOH A 42 442 443 HOH HOH . I 3 HOH A 43 443 444 HOH HOH . I 3 HOH A 44 444 445 HOH HOH . I 3 HOH A 45 445 446 HOH HOH . I 3 HOH A 46 446 449 HOH HOH . I 3 HOH A 47 447 450 HOH HOH . I 3 HOH A 48 448 451 HOH HOH . I 3 HOH A 49 449 452 HOH HOH . I 3 HOH A 50 450 453 HOH HOH . I 3 HOH A 51 451 454 HOH HOH . I 3 HOH A 52 452 408 HOH HOH . J 3 HOH B 1 401 401 HOH HOH . J 3 HOH B 2 402 402 HOH HOH . J 3 HOH B 3 403 403 HOH HOH . J 3 HOH B 4 404 404 HOH HOH . J 3 HOH B 5 405 405 HOH HOH . J 3 HOH B 6 406 406 HOH HOH . J 3 HOH B 7 407 407 HOH HOH . J 3 HOH B 8 408 408 HOH HOH . J 3 HOH B 9 409 409 HOH HOH . J 3 HOH B 10 410 410 HOH HOH . J 3 HOH B 11 411 411 HOH HOH . J 3 HOH B 12 412 412 HOH HOH . J 3 HOH B 13 413 413 HOH HOH . J 3 HOH B 14 414 414 HOH HOH . J 3 HOH B 15 415 415 HOH HOH . J 3 HOH B 16 416 416 HOH HOH . J 3 HOH B 17 417 417 HOH HOH . J 3 HOH B 18 418 418 HOH HOH . J 3 HOH B 19 419 419 HOH HOH . J 3 HOH B 20 420 420 HOH HOH . J 3 HOH B 21 421 421 HOH HOH . J 3 HOH B 22 422 422 HOH HOH . J 3 HOH B 23 423 423 HOH HOH . J 3 HOH B 24 424 424 HOH HOH . J 3 HOH B 25 425 425 HOH HOH . J 3 HOH B 26 426 426 HOH HOH . J 3 HOH B 27 427 427 HOH HOH . J 3 HOH B 28 428 428 HOH HOH . J 3 HOH B 29 429 429 HOH HOH . J 3 HOH B 30 430 430 HOH HOH . J 3 HOH B 31 431 431 HOH HOH . J 3 HOH B 32 432 432 HOH HOH . J 3 HOH B 33 433 433 HOH HOH . J 3 HOH B 34 434 434 HOH HOH . J 3 HOH B 35 435 435 HOH HOH . J 3 HOH B 36 436 436 HOH HOH . J 3 HOH B 37 437 437 HOH HOH . J 3 HOH B 38 438 438 HOH HOH . J 3 HOH B 39 439 439 HOH HOH . J 3 HOH B 40 440 440 HOH HOH . J 3 HOH B 41 441 441 HOH HOH . J 3 HOH B 42 442 442 HOH HOH . J 3 HOH B 43 443 443 HOH HOH . J 3 HOH B 44 444 444 HOH HOH . J 3 HOH B 45 445 445 HOH HOH . J 3 HOH B 46 446 446 HOH HOH . K 3 HOH C 1 401 401 HOH HOH . K 3 HOH C 2 402 402 HOH HOH . K 3 HOH C 3 403 403 HOH HOH . K 3 HOH C 4 404 404 HOH HOH . K 3 HOH C 5 405 405 HOH HOH . K 3 HOH C 6 406 406 HOH HOH . K 3 HOH C 7 407 407 HOH HOH . K 3 HOH C 8 408 408 HOH HOH . K 3 HOH C 9 409 409 HOH HOH . K 3 HOH C 10 410 410 HOH HOH . K 3 HOH C 11 411 411 HOH HOH . K 3 HOH C 12 412 412 HOH HOH . K 3 HOH C 13 413 413 HOH HOH . K 3 HOH C 14 414 414 HOH HOH . K 3 HOH C 15 415 415 HOH HOH . K 3 HOH C 16 416 416 HOH HOH . K 3 HOH C 17 417 417 HOH HOH . K 3 HOH C 18 418 418 HOH HOH . K 3 HOH C 19 419 419 HOH HOH . K 3 HOH C 20 420 420 HOH HOH . K 3 HOH C 21 421 421 HOH HOH . K 3 HOH C 22 422 422 HOH HOH . K 3 HOH C 23 423 423 HOH HOH . K 3 HOH C 24 424 424 HOH HOH . K 3 HOH C 25 425 425 HOH HOH . K 3 HOH C 26 426 426 HOH HOH . K 3 HOH C 27 427 427 HOH HOH . K 3 HOH C 28 428 428 HOH HOH . K 3 HOH C 29 429 429 HOH HOH . K 3 HOH C 30 430 430 HOH HOH . K 3 HOH C 31 431 431 HOH HOH . K 3 HOH C 32 432 432 HOH HOH . K 3 HOH C 33 433 433 HOH HOH . K 3 HOH C 34 434 434 HOH HOH . K 3 HOH C 35 435 435 HOH HOH . K 3 HOH C 36 436 436 HOH HOH . K 3 HOH C 37 437 437 HOH HOH . K 3 HOH C 38 438 438 HOH HOH . K 3 HOH C 39 439 439 HOH HOH . K 3 HOH C 40 440 440 HOH HOH . K 3 HOH C 41 441 441 HOH HOH . L 3 HOH D 1 401 427 HOH HOH . L 3 HOH D 2 402 447 HOH HOH . L 3 HOH D 3 403 448 HOH HOH . L 3 HOH D 4 404 401 HOH HOH . L 3 HOH D 5 405 402 HOH HOH . L 3 HOH D 6 406 403 HOH HOH . L 3 HOH D 7 407 404 HOH HOH . L 3 HOH D 8 408 405 HOH HOH . L 3 HOH D 9 409 406 HOH HOH . L 3 HOH D 10 410 407 HOH HOH . L 3 HOH D 11 411 409 HOH HOH . L 3 HOH D 12 412 410 HOH HOH . L 3 HOH D 13 413 411 HOH HOH . L 3 HOH D 14 414 412 HOH HOH . L 3 HOH D 15 415 413 HOH HOH . L 3 HOH D 16 416 414 HOH HOH . L 3 HOH D 17 417 415 HOH HOH . L 3 HOH D 18 418 416 HOH HOH . L 3 HOH D 19 419 417 HOH HOH . L 3 HOH D 20 420 418 HOH HOH . L 3 HOH D 21 421 419 HOH HOH . L 3 HOH D 22 422 420 HOH HOH . L 3 HOH D 23 423 421 HOH HOH . L 3 HOH D 24 424 422 HOH HOH . L 3 HOH D 25 425 423 HOH HOH . L 3 HOH D 26 426 424 HOH HOH . L 3 HOH D 27 427 425 HOH HOH . L 3 HOH D 28 428 426 HOH HOH . L 3 HOH D 29 429 427 HOH HOH . L 3 HOH D 30 430 428 HOH HOH . L 3 HOH D 31 431 429 HOH HOH . L 3 HOH D 32 432 430 HOH HOH . L 3 HOH D 33 433 431 HOH HOH . L 3 HOH D 34 434 432 HOH HOH . L 3 HOH D 35 435 433 HOH HOH . L 3 HOH D 36 436 434 HOH HOH . L 3 HOH D 37 437 435 HOH HOH . L 3 HOH D 38 438 436 HOH HOH . L 3 HOH D 39 439 437 HOH HOH . L 3 HOH D 40 440 438 HOH HOH . L 3 HOH D 41 441 439 HOH HOH . L 3 HOH D 42 442 440 HOH HOH . L 3 HOH D 43 443 441 HOH HOH . L 3 HOH D 44 444 442 HOH HOH . L 3 HOH D 45 445 443 HOH HOH . L 3 HOH D 46 446 444 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC NXL . . . G 2 3.623 33.038 -25.109 1 33.13 ? OAC NXL 301 C 1 HETATM 2 C CAN NXL . . . G 2 2.67 32.286 -25.045 1 36.19 ? CAN NXL 301 C 1 HETATM 3 N N NXL . . . G 2 1.566 32.511 -25.684 1 39.32 ? N NXL 301 C 1 HETATM 4 C CAJ NXL . . . G 2 0.457 31.562 -25.586 1 37.97 ? CAJ NXL 301 C 1 HETATM 5 C CA NXL . . . G 2 1.485 33.674 -26.482 1 41.87 ? CA NXL 301 C 1 HETATM 6 C C NXL . . . G 2 0.415 34.601 -26.025 1 45.5 ? C NXL 301 C 1 HETATM 7 O O NXL . . . G 2 0.104 34.618 -24.829 1 50.36 ? O NXL 301 C 1 HETATM 8 N NAA NXL . . . G 2 -0.218 35.448 -26.946 1 48.26 ? NAA NXL 301 C 1 HETATM 9 C CB NXL . . . G 2 1.324 33.125 -27.89 1 41.2 ? CB NXL 301 C 1 HETATM 10 C CAH NXL . . . G 2 0.353 31.952 -28.048 1 39.8 ? CAH NXL 301 C 1 HETATM 11 C CAO NXL . . . G 2 0.645 30.922 -26.957 1 40.46 ? CAO NXL 301 C 1 HETATM 12 N NAK NXL . . . G 2 1.982 30.417 -27.093 1 46.98 ? NAK NXL 301 C 1 HETATM 13 O OAL NXL . . . G 2 2.452 29.975 -28.297 1 44.36 ? OAL NXL 301 C 1 HETATM 14 S SAR NXL . . . G 2 3.975 29.807 -28.246 1 42.37 ? SAR NXL 301 C 1 HETATM 15 O OAD NXL . . . G 2 4.74 31.039 -28.325 1 46.81 ? OAD NXL 301 C 1 HETATM 16 O OAE NXL . . . G 2 4.424 28.929 -29.289 1 38.47 ? OAE NXL 301 C 1 HETATM 17 O OAG NXL . . . G 2 4.553 29.232 -27.049 1 40.81 ? OAG NXL 301 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 17 #