data_4S3F # _model_server_result.job_id nZg98KDqvDfJgbF7yoLAbQ _model_server_result.datetime_utc '2024-11-18 09:22:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4s3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 4S3F # _exptl.entry_id 4S3F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.795 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE3-S4 CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 127.15 _cell.angle_gamma 90 _cell.entry_id 4S3F _cell.length_a 111.37 _cell.length_b 62.34 _cell.length_c 86.37 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4S3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 107 A ASP 107 1_555 A N KCX 108 A KCX 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C KCX 108 A KCX 108 1_555 A N PHE 109 A PHE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'Fe3 S4' _chem_comp.formula_weight 295.795 _chem_comp.id F3S _chem_comp.mon_nstd_flag . _chem_comp.name 'FE3-S4 CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 F3S sing 103 n n FE1 S2 F3S sing 104 n n FE1 S3 F3S sing 105 n n FE3 S1 F3S sing 106 n n FE3 S3 F3S sing 107 n n FE3 S4 F3S sing 108 n n FE4 S2 F3S sing 109 n n FE4 S3 F3S sing 110 n n FE4 S4 F3S sing 111 n n # _atom_sites.entry_id 4S3F _atom_sites.fract_transf_matrix[1][1] 0.008979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006804 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F3S A 1 901 901 F3S F3S . C 3 43W A 1 902 902 43W 107 . D 4 HOH A 1 1001 1 HOH HOH . D 4 HOH A 2 1002 2 HOH HOH . D 4 HOH A 3 1003 3 HOH HOH . D 4 HOH A 4 1004 4 HOH HOH . D 4 HOH A 5 1005 5 HOH HOH . D 4 HOH A 6 1006 6 HOH HOH . D 4 HOH A 7 1007 7 HOH HOH . D 4 HOH A 8 1008 8 HOH HOH . D 4 HOH A 9 1009 9 HOH HOH . D 4 HOH A 10 1010 10 HOH HOH . D 4 HOH A 11 1011 11 HOH HOH . D 4 HOH A 12 1012 12 HOH HOH . D 4 HOH A 13 1013 13 HOH HOH . D 4 HOH A 14 1014 14 HOH HOH . D 4 HOH A 15 1015 15 HOH HOH . D 4 HOH A 16 1016 16 HOH HOH . D 4 HOH A 17 1017 17 HOH HOH . D 4 HOH A 18 1018 18 HOH HOH . D 4 HOH A 19 1019 19 HOH HOH . D 4 HOH A 20 1020 20 HOH HOH . D 4 HOH A 21 1021 21 HOH HOH . D 4 HOH A 22 1022 22 HOH HOH . D 4 HOH A 23 1023 23 HOH HOH . D 4 HOH A 24 1024 24 HOH HOH . D 4 HOH A 25 1025 25 HOH HOH . D 4 HOH A 26 1026 26 HOH HOH . D 4 HOH A 27 1027 27 HOH HOH . D 4 HOH A 28 1028 28 HOH HOH . D 4 HOH A 29 1029 29 HOH HOH . D 4 HOH A 30 1030 30 HOH HOH . D 4 HOH A 31 1031 31 HOH HOH . D 4 HOH A 32 1032 32 HOH HOH . D 4 HOH A 33 1033 33 HOH HOH . D 4 HOH A 34 1034 34 HOH HOH . D 4 HOH A 35 1035 35 HOH HOH . D 4 HOH A 36 1036 36 HOH HOH . D 4 HOH A 37 1037 37 HOH HOH . D 4 HOH A 38 1038 38 HOH HOH . D 4 HOH A 39 1039 39 HOH HOH . D 4 HOH A 40 1040 40 HOH HOH . D 4 HOH A 41 1041 41 HOH HOH . D 4 HOH A 42 1042 42 HOH HOH . D 4 HOH A 43 1043 43 HOH HOH . D 4 HOH A 44 1044 44 HOH HOH . D 4 HOH A 45 1045 45 HOH HOH . D 4 HOH A 46 1046 46 HOH HOH . D 4 HOH A 47 1047 47 HOH HOH . D 4 HOH A 48 1048 48 HOH HOH . D 4 HOH A 49 1049 49 HOH HOH . D 4 HOH A 50 1050 50 HOH HOH . D 4 HOH A 51 1051 51 HOH HOH . D 4 HOH A 52 1052 52 HOH HOH . D 4 HOH A 53 1053 53 HOH HOH . D 4 HOH A 54 1054 54 HOH HOH . D 4 HOH A 55 1055 55 HOH HOH . D 4 HOH A 56 1056 56 HOH HOH . D 4 HOH A 57 1057 57 HOH HOH . D 4 HOH A 58 1058 58 HOH HOH . D 4 HOH A 59 1059 59 HOH HOH . D 4 HOH A 60 1060 60 HOH HOH . D 4 HOH A 61 1061 61 HOH HOH . D 4 HOH A 62 1062 62 HOH HOH . D 4 HOH A 63 1063 63 HOH HOH . D 4 HOH A 64 1064 64 HOH HOH . D 4 HOH A 65 1065 65 HOH HOH . D 4 HOH A 66 1066 66 HOH HOH . D 4 HOH A 67 1067 67 HOH HOH . D 4 HOH A 68 1068 68 HOH HOH . D 4 HOH A 69 1069 69 HOH HOH . D 4 HOH A 70 1070 70 HOH HOH . D 4 HOH A 71 1071 71 HOH HOH . D 4 HOH A 72 1072 72 HOH HOH . D 4 HOH A 73 1073 73 HOH HOH . D 4 HOH A 74 1074 74 HOH HOH . D 4 HOH A 75 1075 75 HOH HOH . D 4 HOH A 76 1076 77 HOH HOH . D 4 HOH A 77 1077 78 HOH HOH . D 4 HOH A 78 1078 79 HOH HOH . D 4 HOH A 79 1079 80 HOH HOH . D 4 HOH A 80 1080 81 HOH HOH . D 4 HOH A 81 1081 82 HOH HOH . D 4 HOH A 82 1082 83 HOH HOH . D 4 HOH A 83 1083 84 HOH HOH . D 4 HOH A 84 1084 85 HOH HOH . D 4 HOH A 85 1085 86 HOH HOH . D 4 HOH A 86 1086 87 HOH HOH . D 4 HOH A 87 1087 88 HOH HOH . D 4 HOH A 88 1088 89 HOH HOH . D 4 HOH A 89 1089 90 HOH HOH . D 4 HOH A 90 1090 91 HOH HOH . D 4 HOH A 91 1091 92 HOH HOH . D 4 HOH A 92 1092 93 HOH HOH . D 4 HOH A 93 1093 94 HOH HOH . D 4 HOH A 94 1094 95 HOH HOH . D 4 HOH A 95 1095 96 HOH HOH . D 4 HOH A 96 1096 97 HOH HOH . D 4 HOH A 97 1097 98 HOH HOH . D 4 HOH A 98 1098 99 HOH HOH . D 4 HOH A 99 1099 100 HOH HOH . D 4 HOH A 100 1100 101 HOH HOH . D 4 HOH A 101 1101 102 HOH HOH . D 4 HOH A 102 1102 103 HOH HOH . D 4 HOH A 103 1103 104 HOH HOH . D 4 HOH A 104 1104 105 HOH HOH . D 4 HOH A 105 1105 106 HOH HOH . D 4 HOH A 106 1106 107 HOH HOH . D 4 HOH A 107 1107 108 HOH HOH . D 4 HOH A 108 1108 109 HOH HOH . D 4 HOH A 109 1109 110 HOH HOH . D 4 HOH A 110 1110 111 HOH HOH . D 4 HOH A 111 1111 112 HOH HOH . D 4 HOH A 112 1112 113 HOH HOH . D 4 HOH A 113 1113 114 HOH HOH . D 4 HOH A 114 1114 115 HOH HOH . D 4 HOH A 115 1115 116 HOH HOH . D 4 HOH A 116 1116 117 HOH HOH . D 4 HOH A 117 1117 118 HOH HOH . D 4 HOH A 118 1118 119 HOH HOH . D 4 HOH A 119 1119 120 HOH HOH . D 4 HOH A 120 1120 121 HOH HOH . D 4 HOH A 121 1121 122 HOH HOH . D 4 HOH A 122 1122 123 HOH HOH . D 4 HOH A 123 1123 124 HOH HOH . D 4 HOH A 124 1124 125 HOH HOH . D 4 HOH A 125 1125 126 HOH HOH . D 4 HOH A 126 1126 127 HOH HOH . D 4 HOH A 127 1127 128 HOH HOH . D 4 HOH A 128 1128 129 HOH HOH . D 4 HOH A 129 1129 130 HOH HOH . D 4 HOH A 130 1130 131 HOH HOH . D 4 HOH A 131 1131 132 HOH HOH . D 4 HOH A 132 1132 133 HOH HOH . D 4 HOH A 133 1133 134 HOH HOH . D 4 HOH A 134 1134 135 HOH HOH . D 4 HOH A 135 1135 136 HOH HOH . D 4 HOH A 136 1136 137 HOH HOH . D 4 HOH A 137 1137 138 HOH HOH . D 4 HOH A 138 1138 139 HOH HOH . D 4 HOH A 139 1139 140 HOH HOH . D 4 HOH A 140 1140 141 HOH HOH . D 4 HOH A 141 1141 142 HOH HOH . D 4 HOH A 142 1142 143 HOH HOH . D 4 HOH A 143 1143 144 HOH HOH . D 4 HOH A 144 1144 145 HOH HOH . D 4 HOH A 145 1145 146 HOH HOH . D 4 HOH A 146 1146 147 HOH HOH . D 4 HOH A 147 1147 148 HOH HOH . D 4 HOH A 148 1148 149 HOH HOH . D 4 HOH A 149 1149 150 HOH HOH . D 4 HOH A 150 1150 151 HOH HOH . D 4 HOH A 151 1151 152 HOH HOH . D 4 HOH A 152 1152 153 HOH HOH . D 4 HOH A 153 1153 154 HOH HOH . D 4 HOH A 154 1154 155 HOH HOH . D 4 HOH A 155 1155 156 HOH HOH . D 4 HOH A 156 1156 157 HOH HOH . D 4 HOH A 157 1157 158 HOH HOH . D 4 HOH A 158 1158 161 HOH HOH . D 4 HOH A 159 1159 162 HOH HOH . D 4 HOH A 160 1160 163 HOH HOH . D 4 HOH A 161 1161 164 HOH HOH . D 4 HOH A 162 1162 165 HOH HOH . D 4 HOH A 163 1163 166 HOH HOH . D 4 HOH A 164 1164 167 HOH HOH . D 4 HOH A 165 1165 169 HOH HOH . D 4 HOH A 166 1166 170 HOH HOH . D 4 HOH A 167 1167 171 HOH HOH . D 4 HOH A 168 1168 172 HOH HOH . D 4 HOH A 169 1169 173 HOH HOH . D 4 HOH A 170 1170 174 HOH HOH . D 4 HOH A 171 1171 175 HOH HOH . D 4 HOH A 172 1172 176 HOH HOH . D 4 HOH A 173 1173 177 HOH HOH . D 4 HOH A 174 1174 178 HOH HOH . D 4 HOH A 175 1175 179 HOH HOH . D 4 HOH A 176 1176 180 HOH HOH . D 4 HOH A 177 1177 181 HOH HOH . D 4 HOH A 178 1178 182 HOH HOH . D 4 HOH A 179 1179 183 HOH HOH . D 4 HOH A 180 1180 184 HOH HOH . D 4 HOH A 181 1181 185 HOH HOH . D 4 HOH A 182 1182 186 HOH HOH . D 4 HOH A 183 1183 187 HOH HOH . D 4 HOH A 184 1184 188 HOH HOH . D 4 HOH A 185 1185 189 HOH HOH . D 4 HOH A 186 1186 190 HOH HOH . D 4 HOH A 187 1187 191 HOH HOH . D 4 HOH A 188 1188 192 HOH HOH . D 4 HOH A 189 1189 193 HOH HOH . D 4 HOH A 190 1190 194 HOH HOH . D 4 HOH A 191 1191 195 HOH HOH . D 4 HOH A 192 1192 196 HOH HOH . D 4 HOH A 193 1193 197 HOH HOH . D 4 HOH A 194 1194 198 HOH HOH . D 4 HOH A 195 1195 199 HOH HOH . D 4 HOH A 196 1196 200 HOH HOH . D 4 HOH A 197 1197 201 HOH HOH . D 4 HOH A 198 1198 202 HOH HOH . D 4 HOH A 199 1199 203 HOH HOH . D 4 HOH A 200 1200 204 HOH HOH . D 4 HOH A 201 1201 205 HOH HOH . D 4 HOH A 202 1202 206 HOH HOH . D 4 HOH A 203 1203 207 HOH HOH . D 4 HOH A 204 1204 208 HOH HOH . D 4 HOH A 205 1205 209 HOH HOH . D 4 HOH A 206 1206 210 HOH HOH . D 4 HOH A 207 1207 211 HOH HOH . D 4 HOH A 208 1208 212 HOH HOH . D 4 HOH A 209 1209 213 HOH HOH . D 4 HOH A 210 1210 214 HOH HOH . D 4 HOH A 211 1211 215 HOH HOH . D 4 HOH A 212 1212 216 HOH HOH . D 4 HOH A 213 1213 217 HOH HOH . D 4 HOH A 214 1214 218 HOH HOH . D 4 HOH A 215 1215 219 HOH HOH . D 4 HOH A 216 1216 220 HOH HOH . D 4 HOH A 217 1217 221 HOH HOH . D 4 HOH A 218 1218 222 HOH HOH . D 4 HOH A 219 1219 223 HOH HOH . D 4 HOH A 220 1220 224 HOH HOH . D 4 HOH A 221 1221 225 HOH HOH . D 4 HOH A 222 1222 227 HOH HOH . D 4 HOH A 223 1223 228 HOH HOH . D 4 HOH A 224 1224 229 HOH HOH . D 4 HOH A 225 1225 230 HOH HOH . D 4 HOH A 226 1226 231 HOH HOH . D 4 HOH A 227 1227 232 HOH HOH . D 4 HOH A 228 1228 233 HOH HOH . D 4 HOH A 229 1229 234 HOH HOH . D 4 HOH A 230 1230 235 HOH HOH . D 4 HOH A 231 1231 236 HOH HOH . D 4 HOH A 232 1232 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 F3S . . . B 2 -9.668 29.852 18.727 1 42.44 ? FE1 F3S 901 A 1 HETATM 2 FE FE3 F3S . . . B 2 -11.228 29.381 20.835 1 31.68 ? FE3 F3S 901 A 1 HETATM 3 FE FE4 F3S . . . B 2 -12.468 29.9 18.48 1 30.84 ? FE4 F3S 901 A 1 HETATM 4 S S1 F3S . . . B 2 -9.147 28.635 20.59 1 38.51 ? S1 F3S 901 A 1 HETATM 5 S S2 F3S . . . B 2 -11.014 29.465 16.895 1 34.03 ? S2 F3S 901 A 1 HETATM 6 S S3 F3S . . . B 2 -11.152 31.252 19.657 1 30.77 ? S3 F3S 901 A 1 HETATM 7 S S4 F3S . . . B 2 -12.802 28.183 19.877 1 33.94 ? S4 F3S 901 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #