data_4TGL # _model_server_result.job_id aDqyBGN1afOL9pn2E4miSw _model_server_result.datetime_utc '2024-11-30 23:19:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tgl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":270}' # _entry.id 4TGL # _exptl.entry_id 4TGL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.102 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIETHYL PHOSPHONATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TGL _cell.length_a 48.3 _cell.length_b 93.9 _cell.length_c 122.1 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 29 1_555 A SG CYS 268 A CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf3 A SG CYS 235 A CYS 235 1_555 A SG CYS 244 A CYS 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? covale ? covale1 A OG SER 144 A SER 144 1_555 B P DEP . A DEP 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? # _chem_comp.formula 'C4 H11 O3 P' _chem_comp.formula_weight 138.102 _chem_comp.id DEP _chem_comp.mon_nstd_flag . _chem_comp.name 'DIETHYL PHOSPHONATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DEP sing 83 n n C1 O1 DEP sing 84 n n C1 H11 DEP sing 85 n n C1 H12 DEP sing 86 n n C2 H21 DEP sing 87 n n C2 H22 DEP sing 88 n n C2 H23 DEP sing 89 n n C3 C4 DEP sing 90 n n C3 O2 DEP sing 91 n n C3 H31 DEP sing 92 n n C3 H32 DEP sing 93 n n C4 H41 DEP sing 94 n n C4 H42 DEP sing 95 n n C4 H43 DEP sing 96 n n O1 P DEP sing 97 n n O2 P DEP sing 98 n n O3 P DEP doub 99 n n HP1 P DEP sing 100 n n # _atom_sites.entry_id 4TGL _atom_sites.fract_transf_matrix[1][1] 0.020704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DEP A 1 270 200 DEP DEP . C 3 HOH A 1 271 1 HOH HOH . C 3 HOH A 2 272 2 HOH HOH . C 3 HOH A 3 273 3 HOH HOH . C 3 HOH A 4 274 4 HOH HOH . C 3 HOH A 5 275 5 HOH HOH . C 3 HOH A 6 276 6 HOH HOH . C 3 HOH A 7 277 7 HOH HOH . C 3 HOH A 8 278 8 HOH HOH . C 3 HOH A 9 279 9 HOH HOH . C 3 HOH A 10 280 10 HOH HOH . C 3 HOH A 11 281 12 HOH HOH . C 3 HOH A 12 282 13 HOH HOH . C 3 HOH A 13 283 14 HOH HOH . C 3 HOH A 14 284 15 HOH HOH . C 3 HOH A 15 285 16 HOH HOH . C 3 HOH A 16 286 17 HOH HOH . C 3 HOH A 17 287 18 HOH HOH . C 3 HOH A 18 288 19 HOH HOH . C 3 HOH A 19 289 20 HOH HOH . C 3 HOH A 20 290 21 HOH HOH . C 3 HOH A 21 291 22 HOH HOH . C 3 HOH A 22 292 23 HOH HOH . C 3 HOH A 23 293 24 HOH HOH . C 3 HOH A 24 294 25 HOH HOH . C 3 HOH A 25 295 26 HOH HOH . C 3 HOH A 26 296 27 HOH HOH . C 3 HOH A 27 297 28 HOH HOH . C 3 HOH A 28 298 29 HOH HOH . C 3 HOH A 29 299 30 HOH HOH . C 3 HOH A 30 300 31 HOH HOH . C 3 HOH A 31 301 32 HOH HOH . C 3 HOH A 32 302 33 HOH HOH . C 3 HOH A 33 303 34 HOH HOH . C 3 HOH A 34 304 35 HOH HOH . C 3 HOH A 35 305 36 HOH HOH . C 3 HOH A 36 306 37 HOH HOH . C 3 HOH A 37 307 38 HOH HOH . C 3 HOH A 38 308 39 HOH HOH . C 3 HOH A 39 309 40 HOH HOH . C 3 HOH A 40 310 41 HOH HOH . C 3 HOH A 41 311 42 HOH HOH . C 3 HOH A 42 312 43 HOH HOH . C 3 HOH A 43 313 44 HOH HOH . C 3 HOH A 44 314 45 HOH HOH . C 3 HOH A 45 315 46 HOH HOH . C 3 HOH A 46 316 47 HOH HOH . C 3 HOH A 47 317 48 HOH HOH . C 3 HOH A 48 318 49 HOH HOH . C 3 HOH A 49 319 50 HOH HOH . C 3 HOH A 50 320 51 HOH HOH . C 3 HOH A 51 321 52 HOH HOH . C 3 HOH A 52 322 53 HOH HOH . C 3 HOH A 53 323 54 HOH HOH . C 3 HOH A 54 324 55 HOH HOH . C 3 HOH A 55 325 56 HOH HOH . C 3 HOH A 56 326 57 HOH HOH . C 3 HOH A 57 327 58 HOH HOH . C 3 HOH A 58 328 59 HOH HOH . C 3 HOH A 59 329 60 HOH HOH . C 3 HOH A 60 330 61 HOH HOH . C 3 HOH A 61 331 62 HOH HOH . C 3 HOH A 62 332 63 HOH HOH . C 3 HOH A 63 333 64 HOH HOH . C 3 HOH A 64 334 65 HOH HOH . C 3 HOH A 65 335 66 HOH HOH . C 3 HOH A 66 336 67 HOH HOH . C 3 HOH A 67 337 68 HOH HOH . C 3 HOH A 68 338 69 HOH HOH . C 3 HOH A 69 339 70 HOH HOH . C 3 HOH A 70 340 71 HOH HOH . C 3 HOH A 71 341 72 HOH HOH . C 3 HOH A 72 342 73 HOH HOH . C 3 HOH A 73 343 74 HOH HOH . C 3 HOH A 74 344 75 HOH HOH . C 3 HOH A 75 345 76 HOH HOH . C 3 HOH A 76 346 77 HOH HOH . C 3 HOH A 77 347 78 HOH HOH . C 3 HOH A 78 348 79 HOH HOH . C 3 HOH A 79 349 80 HOH HOH . C 3 HOH A 80 350 81 HOH HOH . C 3 HOH A 81 351 82 HOH HOH . C 3 HOH A 82 352 83 HOH HOH . C 3 HOH A 83 353 84 HOH HOH . C 3 HOH A 84 354 85 HOH HOH . C 3 HOH A 85 355 86 HOH HOH . C 3 HOH A 86 356 87 HOH HOH . C 3 HOH A 87 357 88 HOH HOH . C 3 HOH A 88 358 89 HOH HOH . C 3 HOH A 89 359 90 HOH HOH . C 3 HOH A 90 360 91 HOH HOH . C 3 HOH A 91 361 92 HOH HOH . C 3 HOH A 92 362 93 HOH HOH . C 3 HOH A 93 363 94 HOH HOH . C 3 HOH A 94 364 95 HOH HOH . C 3 HOH A 95 365 96 HOH HOH . C 3 HOH A 96 366 97 HOH HOH . C 3 HOH A 97 367 98 HOH HOH . C 3 HOH A 98 368 99 HOH HOH . C 3 HOH A 99 369 100 HOH HOH . C 3 HOH A 100 370 101 HOH HOH . C 3 HOH A 101 371 102 HOH HOH . C 3 HOH A 102 372 103 HOH HOH . C 3 HOH A 103 373 104 HOH HOH . C 3 HOH A 104 374 105 HOH HOH . C 3 HOH A 105 375 106 HOH HOH . C 3 HOH A 106 376 107 HOH HOH . C 3 HOH A 107 377 108 HOH HOH . C 3 HOH A 108 378 109 HOH HOH . C 3 HOH A 109 379 110 HOH HOH . C 3 HOH A 110 380 111 HOH HOH . C 3 HOH A 111 381 112 HOH HOH . C 3 HOH A 112 382 113 HOH HOH . C 3 HOH A 113 383 114 HOH HOH . C 3 HOH A 114 384 115 HOH HOH . C 3 HOH A 115 385 116 HOH HOH . C 3 HOH A 116 386 117 HOH HOH . C 3 HOH A 117 387 118 HOH HOH . C 3 HOH A 118 388 119 HOH HOH . C 3 HOH A 119 389 120 HOH HOH . C 3 HOH A 120 390 121 HOH HOH . C 3 HOH A 121 391 122 HOH HOH . C 3 HOH A 122 392 123 HOH HOH . C 3 HOH A 123 393 124 HOH HOH . C 3 HOH A 124 394 125 HOH HOH . C 3 HOH A 125 395 126 HOH HOH . C 3 HOH A 126 396 127 HOH HOH . C 3 HOH A 127 397 128 HOH HOH . C 3 HOH A 128 398 129 HOH HOH . C 3 HOH A 129 399 130 HOH HOH . C 3 HOH A 130 400 131 HOH HOH . C 3 HOH A 131 401 132 HOH HOH . C 3 HOH A 132 402 133 HOH HOH . C 3 HOH A 133 403 134 HOH HOH . C 3 HOH A 134 404 135 HOH HOH . C 3 HOH A 135 405 136 HOH HOH . C 3 HOH A 136 406 137 HOH HOH . C 3 HOH A 137 407 138 HOH HOH . C 3 HOH A 138 408 139 HOH HOH . C 3 HOH A 139 409 140 HOH HOH . C 3 HOH A 140 410 141 HOH HOH . C 3 HOH A 141 411 142 HOH HOH . C 3 HOH A 142 412 143 HOH HOH . C 3 HOH A 143 413 144 HOH HOH . C 3 HOH A 144 414 145 HOH HOH . C 3 HOH A 145 415 146 HOH HOH . C 3 HOH A 146 416 147 HOH HOH . C 3 HOH A 147 417 148 HOH HOH . C 3 HOH A 148 418 149 HOH HOH . C 3 HOH A 149 419 150 HOH HOH . C 3 HOH A 150 420 151 HOH HOH . C 3 HOH A 151 421 152 HOH HOH . C 3 HOH A 152 422 153 HOH HOH . C 3 HOH A 153 423 154 HOH HOH . C 3 HOH A 154 424 155 HOH HOH . C 3 HOH A 155 425 156 HOH HOH . C 3 HOH A 156 426 157 HOH HOH . C 3 HOH A 157 427 158 HOH HOH . C 3 HOH A 158 428 159 HOH HOH . C 3 HOH A 159 429 160 HOH HOH . C 3 HOH A 160 430 161 HOH HOH . C 3 HOH A 161 431 162 HOH HOH . C 3 HOH A 162 432 163 HOH HOH . C 3 HOH A 163 433 164 HOH HOH . C 3 HOH A 164 434 165 HOH HOH . C 3 HOH A 165 435 166 HOH HOH . C 3 HOH A 166 436 167 HOH HOH . C 3 HOH A 167 437 168 HOH HOH . C 3 HOH A 168 438 169 HOH HOH . C 3 HOH A 169 439 170 HOH HOH . C 3 HOH A 170 440 171 HOH HOH . C 3 HOH A 171 441 172 HOH HOH . C 3 HOH A 172 442 173 HOH HOH . C 3 HOH A 173 443 174 HOH HOH . C 3 HOH A 174 444 175 HOH HOH . C 3 HOH A 175 445 176 HOH HOH . C 3 HOH A 176 446 177 HOH HOH . C 3 HOH A 177 447 178 HOH HOH . C 3 HOH A 178 448 179 HOH HOH . C 3 HOH A 179 449 180 HOH HOH . C 3 HOH A 180 450 181 HOH HOH . C 3 HOH A 181 451 182 HOH HOH . C 3 HOH A 182 452 183 HOH HOH . C 3 HOH A 183 453 184 HOH HOH . C 3 HOH A 184 454 185 HOH HOH . C 3 HOH A 185 455 186 HOH HOH . C 3 HOH A 186 456 187 HOH HOH . C 3 HOH A 187 457 188 HOH HOH . C 3 HOH A 188 458 189 HOH HOH . C 3 HOH A 189 459 190 HOH HOH . C 3 HOH A 190 460 191 HOH HOH . C 3 HOH A 191 461 192 HOH HOH . C 3 HOH A 192 462 193 HOH HOH . C 3 HOH A 193 463 194 HOH HOH . C 3 HOH A 194 464 195 HOH HOH . C 3 HOH A 195 465 196 HOH HOH . C 3 HOH A 196 466 197 HOH HOH . C 3 HOH A 197 467 198 HOH HOH . C 3 HOH A 198 468 199 HOH HOH . C 3 HOH A 199 469 200 HOH HOH . C 3 HOH A 200 470 201 HOH HOH . C 3 HOH A 201 471 202 HOH HOH . C 3 HOH A 202 472 203 HOH HOH . C 3 HOH A 203 473 204 HOH HOH . C 3 HOH A 204 474 205 HOH HOH . C 3 HOH A 205 475 206 HOH HOH . C 3 HOH A 206 476 207 HOH HOH . C 3 HOH A 207 477 208 HOH HOH . C 3 HOH A 208 478 209 HOH HOH . C 3 HOH A 209 479 210 HOH HOH . C 3 HOH A 210 480 211 HOH HOH . C 3 HOH A 211 481 212 HOH HOH . C 3 HOH A 212 482 213 HOH HOH . C 3 HOH A 213 483 214 HOH HOH . C 3 HOH A 214 484 215 HOH HOH . C 3 HOH A 215 485 216 HOH HOH . C 3 HOH A 216 486 217 HOH HOH . C 3 HOH A 217 487 218 HOH HOH . C 3 HOH A 218 488 219 HOH HOH . C 3 HOH A 219 489 220 HOH HOH . C 3 HOH A 220 490 221 HOH HOH . C 3 HOH A 221 491 222 HOH HOH . C 3 HOH A 222 492 223 HOH HOH . C 3 HOH A 223 493 224 HOH HOH . C 3 HOH A 224 494 225 HOH HOH . C 3 HOH A 225 495 226 HOH HOH . C 3 HOH A 226 496 227 HOH HOH . C 3 HOH A 227 497 228 HOH HOH . C 3 HOH A 228 498 229 HOH HOH . C 3 HOH A 229 499 230 HOH HOH . C 3 HOH A 230 500 231 HOH HOH . C 3 HOH A 231 501 232 HOH HOH . C 3 HOH A 232 502 233 HOH HOH . C 3 HOH A 233 503 234 HOH HOH . C 3 HOH A 234 504 235 HOH HOH . C 3 HOH A 235 505 236 HOH HOH . C 3 HOH A 236 506 237 HOH HOH . C 3 HOH A 237 507 238 HOH HOH . C 3 HOH A 238 508 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DEP . . . B 2 -17.794 12.948 85.583 1 28.6 ? C1 DEP 270 A 1 HETATM 2 C C2 DEP . . . B 2 -17.952 11.935 86.711 1 28.5 ? C2 DEP 270 A 1 HETATM 3 C C3 DEP . . . B 2 -16.361 17.834 86.464 1 29.9 ? C3 DEP 270 A 1 HETATM 4 C C4 DEP . . . B 2 -16.004 19.307 86.59 1 30.9 ? C4 DEP 270 A 1 HETATM 5 O O1 DEP . . . B 2 -17.74 14.233 86.244 1 28.6 ? O1 DEP 270 A 1 HETATM 6 O O2 DEP . . . B 2 -16.869 16.786 86.505 1 29.1 ? O2 DEP 270 A 1 HETATM 7 O O3 DEP . . . B 2 -15.906 15.376 84.996 1 27.9 ? O3 DEP 270 A 1 HETATM 8 P P DEP . . . B 2 -17.219 15.617 85.53 1 27.7 ? P DEP 270 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 520 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #