data_4TKC # _model_server_result.job_id -ucu0d7W49LcDZLD7T7LzA _model_server_result.datetime_utc '2025-07-01 19:34:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tkc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4TKC # _exptl.entry_id 4TKC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TKC _cell.length_a 58.42 _cell.length_b 58.42 _cell.length_c 57.732 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TKC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 57.732 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 153 n n C1 C2 GOL sing 154 n n C1 H11 GOL sing 155 n n C1 H12 GOL sing 156 n n O1 HO1 GOL sing 157 n n C2 O2 GOL sing 158 n n C2 C3 GOL sing 159 n n C2 H2 GOL sing 160 n n O2 HO2 GOL sing 161 n n C3 O3 GOL sing 162 n n C3 H31 GOL sing 163 n n C3 H32 GOL sing 164 n n O3 HO3 GOL sing 165 n n # _atom_sites.entry_id 4TKC _atom_sites.fract_transf_matrix[1][1] 0.017118 _atom_sites.fract_transf_matrix[1][2] 0.009883 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BMA A 1 201 201 BMA BMA . C 3 GOL A 1 202 202 GOL GOL . D 4 MAN A 1 203 203 MAN MAN . E 5 HOH A 1 301 318 HOH HOH . E 5 HOH A 2 302 521 HOH HOH . E 5 HOH A 3 303 394 HOH HOH . E 5 HOH A 4 304 381 HOH HOH . E 5 HOH A 5 305 317 HOH HOH . E 5 HOH A 6 306 324 HOH HOH . E 5 HOH A 7 307 504 HOH HOH . E 5 HOH A 8 308 447 HOH HOH . E 5 HOH A 9 309 303 HOH HOH . E 5 HOH A 10 310 401 HOH HOH . E 5 HOH A 11 311 305 HOH HOH . E 5 HOH A 12 312 338 HOH HOH . E 5 HOH A 13 313 442 HOH HOH . E 5 HOH A 14 314 387 HOH HOH . E 5 HOH A 15 315 316 HOH HOH . E 5 HOH A 16 316 306 HOH HOH . E 5 HOH A 17 317 438 HOH HOH . E 5 HOH A 18 318 339 HOH HOH . E 5 HOH A 19 319 435 HOH HOH . E 5 HOH A 20 320 326 HOH HOH . E 5 HOH A 21 321 358 HOH HOH . E 5 HOH A 22 322 409 HOH HOH . E 5 HOH A 23 323 354 HOH HOH . E 5 HOH A 24 324 307 HOH HOH . E 5 HOH A 25 325 331 HOH HOH . E 5 HOH A 26 326 319 HOH HOH . E 5 HOH A 27 327 304 HOH HOH . E 5 HOH A 28 328 313 HOH HOH . E 5 HOH A 29 329 400 HOH HOH . E 5 HOH A 30 330 426 HOH HOH . E 5 HOH A 31 331 414 HOH HOH . E 5 HOH A 32 332 349 HOH HOH . E 5 HOH A 33 333 337 HOH HOH . E 5 HOH A 34 334 506 HOH HOH . E 5 HOH A 35 335 312 HOH HOH . E 5 HOH A 36 336 526 HOH HOH . E 5 HOH A 37 337 321 HOH HOH . E 5 HOH A 38 338 517 HOH HOH . E 5 HOH A 39 339 522 HOH HOH . E 5 HOH A 40 340 362 HOH HOH . E 5 HOH A 41 341 365 HOH HOH . E 5 HOH A 42 342 376 HOH HOH . E 5 HOH A 43 343 368 HOH HOH . E 5 HOH A 44 344 350 HOH HOH . E 5 HOH A 45 345 369 HOH HOH . E 5 HOH A 46 346 328 HOH HOH . E 5 HOH A 47 347 309 HOH HOH . E 5 HOH A 48 348 427 HOH HOH . E 5 HOH A 49 349 527 HOH HOH . E 5 HOH A 50 350 396 HOH HOH . E 5 HOH A 51 351 420 HOH HOH . E 5 HOH A 52 352 507 HOH HOH . E 5 HOH A 53 353 302 HOH HOH . E 5 HOH A 54 354 356 HOH HOH . E 5 HOH A 55 355 351 HOH HOH . E 5 HOH A 56 356 346 HOH HOH . E 5 HOH A 57 357 505 HOH HOH . E 5 HOH A 58 358 344 HOH HOH . E 5 HOH A 59 359 511 HOH HOH . E 5 HOH A 60 360 341 HOH HOH . E 5 HOH A 61 361 509 HOH HOH . E 5 HOH A 62 362 343 HOH HOH . E 5 HOH A 63 363 503 HOH HOH . E 5 HOH A 64 364 336 HOH HOH . E 5 HOH A 65 365 329 HOH HOH . E 5 HOH A 66 366 502 HOH HOH . E 5 HOH A 67 367 391 HOH HOH . E 5 HOH A 68 368 397 HOH HOH . E 5 HOH A 69 369 425 HOH HOH . E 5 HOH A 70 370 385 HOH HOH . E 5 HOH A 71 371 432 HOH HOH . E 5 HOH A 72 372 403 HOH HOH . E 5 HOH A 73 373 510 HOH HOH . E 5 HOH A 74 374 528 HOH HOH . E 5 HOH A 75 375 367 HOH HOH . E 5 HOH A 76 376 378 HOH HOH . E 5 HOH A 77 377 410 HOH HOH . E 5 HOH A 78 378 352 HOH HOH . E 5 HOH A 79 379 355 HOH HOH . E 5 HOH A 80 380 357 HOH HOH . E 5 HOH A 81 381 519 HOH HOH . E 5 HOH A 82 382 515 HOH HOH . E 5 HOH A 83 383 428 HOH HOH . E 5 HOH A 84 384 512 HOH HOH . E 5 HOH A 85 385 524 HOH HOH . E 5 HOH A 86 386 359 HOH HOH . E 5 HOH A 87 387 520 HOH HOH . E 5 HOH A 88 388 301 HOH HOH . E 5 HOH A 89 389 308 HOH HOH . E 5 HOH A 90 390 310 HOH HOH . E 5 HOH A 91 391 314 HOH HOH . E 5 HOH A 92 392 320 HOH HOH . E 5 HOH A 93 393 322 HOH HOH . E 5 HOH A 94 394 323 HOH HOH . E 5 HOH A 95 395 325 HOH HOH . E 5 HOH A 96 396 327 HOH HOH . E 5 HOH A 97 397 332 HOH HOH . E 5 HOH A 98 398 334 HOH HOH . E 5 HOH A 99 399 335 HOH HOH . E 5 HOH A 100 400 342 HOH HOH . E 5 HOH A 101 401 345 HOH HOH . E 5 HOH A 102 402 347 HOH HOH . E 5 HOH A 103 403 353 HOH HOH . E 5 HOH A 104 404 361 HOH HOH . E 5 HOH A 105 405 363 HOH HOH . E 5 HOH A 106 406 370 HOH HOH . E 5 HOH A 107 407 371 HOH HOH . E 5 HOH A 108 408 373 HOH HOH . E 5 HOH A 109 409 374 HOH HOH . E 5 HOH A 110 410 375 HOH HOH . E 5 HOH A 111 411 386 HOH HOH . E 5 HOH A 112 412 393 HOH HOH . E 5 HOH A 113 413 399 HOH HOH . E 5 HOH A 114 414 402 HOH HOH . E 5 HOH A 115 415 405 HOH HOH . E 5 HOH A 116 416 406 HOH HOH . E 5 HOH A 117 417 417 HOH HOH . E 5 HOH A 118 418 421 HOH HOH . E 5 HOH A 119 419 434 HOH HOH . E 5 HOH A 120 420 439 HOH HOH . E 5 HOH A 121 421 440 HOH HOH . E 5 HOH A 122 422 443 HOH HOH . E 5 HOH A 123 423 446 HOH HOH . E 5 HOH A 124 424 501 HOH HOH . E 5 HOH A 125 425 508 HOH HOH . E 5 HOH A 126 426 513 HOH HOH . E 5 HOH A 127 427 514 HOH HOH . E 5 HOH A 128 428 516 HOH HOH . E 5 HOH A 129 429 518 HOH HOH . E 5 HOH A 130 430 523 HOH HOH . E 5 HOH A 131 431 525 HOH HOH . E 5 HOH A 132 432 529 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 20.95 3.216 22.331 1 22.89 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 3 20.024 3.301 23.428 1 36.11 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 3 20.813 4.447 21.46 1 30.53 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 3 20.706 5.574 22.382 1 24.73 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 3 22.003 4.436 20.494 1 28.47 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 3 21.954 5.42 19.416 1 19.61 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #