data_4TKJ
#
_model_server_result.job_id            Omfn2jKxIc-_ptA4pz3krQ 
_model_server_result.datetime_utc      '2024-11-23 05:01:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tkj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    4TKJ 
#
_exptl.entry_id    4TKJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              259.151 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4TKJ 
_cell.length_a            54.706 
_cell.length_b            69.894 
_cell.length_c            33.655 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TKJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 N O8 P' 
_chem_comp.formula_weight    259.151 
_chem_comp.id                GLP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     'GLUCOSAMINE 6-PHOSPHATE;6-O-phosphono-alpha-D-glucosamine;2-amino-2-deoxy-6-O-phosphono-alpha-D-glucose;2-amino-2-deoxy-6-O-phosphono-D-glucose;2-amino-2-deoxy-6-O-phosphono-glucose' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GLP sing 102 n n 
C1 O1 GLP sing 103 n n 
C1 O5 GLP sing 104 n n 
C1 H1 GLP sing 105 n n 
C2 C3 GLP sing 106 n n 
C2 N2 GLP sing 107 n n 
C2 H2 GLP sing 108 n n 
C3 C4 GLP sing 109 n n 
C3 O3 GLP sing 110 n n 
C3 H3 GLP sing 111 n n 
C4 C5 GLP sing 112 n n 
C4 O4 GLP sing 113 n n 
C4 H4 GLP sing 114 n n 
C5 C6 GLP sing 115 n n 
C5 O5 GLP sing 116 n n 
C5 H5 GLP sing 117 n n 
C6 O6 GLP sing 118 n n 
C6 H61 GLP sing 119 n n 
C6 H62 GLP sing 120 n n 
O1 HO1 GLP sing 121 n n 
N2 HN21 GLP sing 122 n n 
N2 HN22 GLP sing 123 n n 
O3 HO3 GLP sing 124 n n 
O4 HO4 GLP sing 125 n n 
O6 P GLP sing 126 n n 
P O1P GLP doub 127 n n 
P O2P GLP sing 128 n n 
P O3P GLP sing 129 n n 
O2P HOP2 GLP sing 130 n n 
O3P HOP3 GLP sing 131 n n 
#
_pdbx_chem_comp_identifier.comp_id            GLP 
_pdbx_chem_comp_identifier.identifier         a-D-GlcpN6PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     4TKJ 
_atom_sites.fract_transf_matrix[1][1]    0.01828 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014307 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029713 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PLM A 1 201 200 PLM PLM . 
C 3 P6G A 1 202 201 P6G P6G . 
D 3 P6G A 1 203 202 P6G P6G . 
E 4 GLP A 1 204 210 GLP GLP . 
F 5 HOH A 1 301 1040 HOH HOH . 
F 5 HOH A 2 302 1142 HOH HOH . 
F 5 HOH A 3 303 1079 HOH HOH . 
F 5 HOH A 4 304 1067 HOH HOH . 
F 5 HOH A 5 305 1261 HOH HOH . 
F 5 HOH A 6 306 1181 HOH HOH . 
F 5 HOH A 7 307 1207 HOH HOH . 
F 5 HOH A 8 308 1256 HOH HOH . 
F 5 HOH A 9 309 1214 HOH HOH . 
F 5 HOH A 10 310 1054 HOH HOH . 
F 5 HOH A 11 311 1049 HOH HOH . 
F 5 HOH A 12 312 1184 HOH HOH . 
F 5 HOH A 13 313 1012 HOH HOH . 
F 5 HOH A 14 314 1115 HOH HOH . 
F 5 HOH A 15 315 1099 HOH HOH . 
F 5 HOH A 16 316 1025 HOH HOH . 
F 5 HOH A 17 317 1066 HOH HOH . 
F 5 HOH A 18 318 1194 HOH HOH . 
F 5 HOH A 19 319 1081 HOH HOH . 
F 5 HOH A 20 320 1166 HOH HOH . 
F 5 HOH A 21 321 1183 HOH HOH . 
F 5 HOH A 22 322 1032 HOH HOH . 
F 5 HOH A 23 323 1015 HOH HOH . 
F 5 HOH A 24 324 1006 HOH HOH . 
F 5 HOH A 25 325 1171 HOH HOH . 
F 5 HOH A 26 326 1050 HOH HOH . 
F 5 HOH A 27 327 1200 HOH HOH . 
F 5 HOH A 28 328 1057 HOH HOH . 
F 5 HOH A 29 329 1129 HOH HOH . 
F 5 HOH A 30 330 1086 HOH HOH . 
F 5 HOH A 31 331 1209 HOH HOH . 
F 5 HOH A 32 332 1003 HOH HOH . 
F 5 HOH A 33 333 1150 HOH HOH . 
F 5 HOH A 34 334 1178 HOH HOH . 
F 5 HOH A 35 335 1126 HOH HOH . 
F 5 HOH A 36 336 1013 HOH HOH . 
F 5 HOH A 37 337 1038 HOH HOH . 
F 5 HOH A 38 338 1153 HOH HOH . 
F 5 HOH A 39 339 1009 HOH HOH . 
F 5 HOH A 40 340 1147 HOH HOH . 
F 5 HOH A 41 341 1253 HOH HOH . 
F 5 HOH A 42 342 1161 HOH HOH . 
F 5 HOH A 43 343 1073 HOH HOH . 
F 5 HOH A 44 344 1127 HOH HOH . 
F 5 HOH A 45 345 1007 HOH HOH . 
F 5 HOH A 46 346 1156 HOH HOH . 
F 5 HOH A 47 347 1180 HOH HOH . 
F 5 HOH A 48 348 1060 HOH HOH . 
F 5 HOH A 49 349 1100 HOH HOH . 
F 5 HOH A 50 350 1035 HOH HOH . 
F 5 HOH A 51 351 1055 HOH HOH . 
F 5 HOH A 52 352 1122 HOH HOH . 
F 5 HOH A 53 353 1114 HOH HOH . 
F 5 HOH A 54 354 1133 HOH HOH . 
F 5 HOH A 55 355 1136 HOH HOH . 
F 5 HOH A 56 356 1016 HOH HOH . 
F 5 HOH A 57 357 1064 HOH HOH . 
F 5 HOH A 58 358 1033 HOH HOH . 
F 5 HOH A 59 359 1048 HOH HOH . 
F 5 HOH A 60 360 1037 HOH HOH . 
F 5 HOH A 61 361 1189 HOH HOH . 
F 5 HOH A 62 362 1169 HOH HOH . 
F 5 HOH A 63 363 1063 HOH HOH . 
F 5 HOH A 64 364 1172 HOH HOH . 
F 5 HOH A 65 365 1119 HOH HOH . 
F 5 HOH A 66 366 1017 HOH HOH . 
F 5 HOH A 67 367 1173 HOH HOH . 
F 5 HOH A 68 368 1031 HOH HOH . 
F 5 HOH A 69 369 1047 HOH HOH . 
F 5 HOH A 70 370 1051 HOH HOH . 
F 5 HOH A 71 371 1123 HOH HOH . 
F 5 HOH A 72 372 1034 HOH HOH . 
F 5 HOH A 73 373 1084 HOH HOH . 
F 5 HOH A 74 374 1179 HOH HOH . 
F 5 HOH A 75 375 1152 HOH HOH . 
F 5 HOH A 76 376 1203 HOH HOH . 
F 5 HOH A 77 377 1080 HOH HOH . 
F 5 HOH A 78 378 1162 HOH HOH . 
F 5 HOH A 79 379 1259 HOH HOH . 
F 5 HOH A 80 380 1238 HOH HOH . 
F 5 HOH A 81 381 1112 HOH HOH . 
F 5 HOH A 82 382 1128 HOH HOH . 
F 5 HOH A 83 383 1097 HOH HOH . 
F 5 HOH A 84 384 1188 HOH HOH . 
F 5 HOH A 85 385 1196 HOH HOH . 
F 5 HOH A 86 386 1008 HOH HOH . 
F 5 HOH A 87 387 1213 HOH HOH . 
F 5 HOH A 88 388 1059 HOH HOH . 
F 5 HOH A 89 389 1065 HOH HOH . 
F 5 HOH A 90 390 1074 HOH HOH . 
F 5 HOH A 91 391 1043 HOH HOH . 
F 5 HOH A 92 392 1125 HOH HOH . 
F 5 HOH A 93 393 1157 HOH HOH . 
F 5 HOH A 94 394 1052 HOH HOH . 
F 5 HOH A 95 395 1163 HOH HOH . 
F 5 HOH A 96 396 1056 HOH HOH . 
F 5 HOH A 97 397 1255 HOH HOH . 
F 5 HOH A 98 398 1254 HOH HOH . 
F 5 HOH A 99 399 1053 HOH HOH . 
F 5 HOH A 100 400 1121 HOH HOH . 
F 5 HOH A 101 401 1176 HOH HOH . 
F 5 HOH A 102 402 1046 HOH HOH . 
F 5 HOH A 103 403 1160 HOH HOH . 
F 5 HOH A 104 404 1010 HOH HOH . 
F 5 HOH A 105 405 1195 HOH HOH . 
F 5 HOH A 106 406 1174 HOH HOH . 
F 5 HOH A 107 407 1102 HOH HOH . 
F 5 HOH A 108 408 1089 HOH HOH . 
F 5 HOH A 109 409 1134 HOH HOH . 
F 5 HOH A 110 410 1138 HOH HOH . 
F 5 HOH A 111 411 1001 HOH HOH . 
F 5 HOH A 112 412 1205 HOH HOH . 
F 5 HOH A 113 413 1132 HOH HOH . 
F 5 HOH A 114 414 1191 HOH HOH . 
F 5 HOH A 115 415 1149 HOH HOH . 
F 5 HOH A 116 416 1118 HOH HOH . 
F 5 HOH A 117 417 1002 HOH HOH . 
F 5 HOH A 118 418 1242 HOH HOH . 
F 5 HOH A 119 419 1027 HOH HOH . 
F 5 HOH A 120 420 1011 HOH HOH . 
F 5 HOH A 121 421 1018 HOH HOH . 
F 5 HOH A 122 422 1020 HOH HOH . 
F 5 HOH A 123 423 1022 HOH HOH . 
F 5 HOH A 124 424 1023 HOH HOH . 
F 5 HOH A 125 425 1026 HOH HOH . 
F 5 HOH A 126 426 1030 HOH HOH . 
F 5 HOH A 127 427 1036 HOH HOH . 
F 5 HOH A 128 428 1039 HOH HOH . 
F 5 HOH A 129 429 1041 HOH HOH . 
F 5 HOH A 130 430 1045 HOH HOH . 
F 5 HOH A 131 431 1062 HOH HOH . 
F 5 HOH A 132 432 1068 HOH HOH . 
F 5 HOH A 133 433 1069 HOH HOH . 
F 5 HOH A 134 434 1070 HOH HOH . 
F 5 HOH A 135 435 1071 HOH HOH . 
F 5 HOH A 136 436 1072 HOH HOH . 
F 5 HOH A 137 437 1075 HOH HOH . 
F 5 HOH A 138 438 1076 HOH HOH . 
F 5 HOH A 139 439 1077 HOH HOH . 
F 5 HOH A 140 440 1087 HOH HOH . 
F 5 HOH A 141 441 1088 HOH HOH . 
F 5 HOH A 142 442 1090 HOH HOH . 
F 5 HOH A 143 443 1091 HOH HOH . 
F 5 HOH A 144 444 1092 HOH HOH . 
F 5 HOH A 145 445 1093 HOH HOH . 
F 5 HOH A 146 446 1094 HOH HOH . 
F 5 HOH A 147 447 1095 HOH HOH . 
F 5 HOH A 148 448 1096 HOH HOH . 
F 5 HOH A 149 449 1098 HOH HOH . 
F 5 HOH A 150 450 1101 HOH HOH . 
F 5 HOH A 151 451 1103 HOH HOH . 
F 5 HOH A 152 452 1104 HOH HOH . 
F 5 HOH A 153 453 1105 HOH HOH . 
F 5 HOH A 154 454 1107 HOH HOH . 
F 5 HOH A 155 455 1108 HOH HOH . 
F 5 HOH A 156 456 1109 HOH HOH . 
F 5 HOH A 157 457 1110 HOH HOH . 
F 5 HOH A 158 458 1117 HOH HOH . 
F 5 HOH A 159 459 1130 HOH HOH . 
F 5 HOH A 160 460 1131 HOH HOH . 
F 5 HOH A 161 461 1135 HOH HOH . 
F 5 HOH A 162 462 1137 HOH HOH . 
F 5 HOH A 163 463 1141 HOH HOH . 
F 5 HOH A 164 464 1143 HOH HOH . 
F 5 HOH A 165 465 1144 HOH HOH . 
F 5 HOH A 166 466 1145 HOH HOH . 
F 5 HOH A 167 467 1146 HOH HOH . 
F 5 HOH A 168 468 1154 HOH HOH . 
F 5 HOH A 169 469 1155 HOH HOH . 
F 5 HOH A 170 470 1158 HOH HOH . 
F 5 HOH A 171 471 1159 HOH HOH . 
F 5 HOH A 172 472 1164 HOH HOH . 
F 5 HOH A 173 473 1165 HOH HOH . 
F 5 HOH A 174 474 1168 HOH HOH . 
F 5 HOH A 175 475 1177 HOH HOH . 
F 5 HOH A 176 476 1182 HOH HOH . 
F 5 HOH A 177 477 1187 HOH HOH . 
F 5 HOH A 178 478 1192 HOH HOH . 
F 5 HOH A 179 479 1193 HOH HOH . 
F 5 HOH A 180 480 1197 HOH HOH . 
F 5 HOH A 181 481 1199 HOH HOH . 
F 5 HOH A 182 482 1201 HOH HOH . 
F 5 HOH A 183 483 1220 HOH HOH . 
F 5 HOH A 184 484 1226 HOH HOH . 
F 5 HOH A 185 485 1243 HOH HOH . 
F 5 HOH A 186 486 1251 HOH HOH . 
F 5 HOH A 187 487 1252 HOH HOH . 
F 5 HOH A 188 488 1258 HOH HOH . 
F 5 HOH A 189 489 1260 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GLP . . . E 4 19.582 -24.515 -1.882 0.52 12.25 ? C1 GLP 204 A 1 
HETATM 2 C C2 GLP . . . E 4 19.746 -23.905 -3.228 0.52 10.21 ? C2 GLP 204 A 1 
HETATM 3 C C3 GLP . . . E 4 18.609 -23.162 -3.598 0.52 10.42 ? C3 GLP 204 A 1 
HETATM 4 C C4 GLP . . . E 4 17.365 -23.963 -3.578 0.52 9.68 ? C4 GLP 204 A 1 
HETATM 5 C C5 GLP . . . E 4 17.132 -24.48 -2.221 0.52 6.71 ? C5 GLP 204 A 1 
HETATM 6 C C6 GLP . . . E 4 15.826 -25.254 -2.088 0.52 10.41 ? C6 GLP 204 A 1 
HETATM 7 O O1 GLP . . . E 4 19.694 -23.971 -0.613 0.52 29.3 ? O1 GLP 204 A 1 
HETATM 8 N N2 GLP . . . E 4 21.039 -23.649 -3.834 0.52 32.35 ? N2 GLP 204 A 1 
HETATM 9 O O3 GLP . . . E 4 18.967 -22.583 -4.804 0.52 28.39 ? O3 GLP 204 A 1 
HETATM 10 O O4 GLP . . . E 4 16.528 -23.088 -3.585 0.52 16.3 ? O4 GLP 204 A 1 
HETATM 11 O O5 GLP . . . E 4 18.324 -25.282 -1.831 0.52 13.49 ? O5 GLP 204 A 1 
HETATM 12 O O6 GLP . . . E 4 14.992 -24.815 -0.963 0.52 18.7 ? O6 GLP 204 A 1 
HETATM 13 P P GLP . . . E 4 15.493 -25.229 0.637 0.52 7.86 ? P GLP 204 A 1 
HETATM 14 O O1P GLP . . . E 4 15.64 -26.696 0.515 0.52 16.24 ? O1P GLP 204 A 1 
HETATM 15 O O2P GLP . . . E 4 14.586 -24.845 1.563 0.52 7.39 ? O2P GLP 204 A 1 
HETATM 16 O O3P GLP . . . E 4 16.771 -24.616 0.885 0.52 8.67 ? O3P GLP 204 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           16 
#