data_4TKP # _model_server_result.job_id AthmZEtDfNa4GBIWdsQZvg _model_server_result.datetime_utc '2024-12-26 16:25:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4TKP # _exptl.entry_id 4TKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TKP _cell.length_a 78.17 _cell.length_b 78.17 _cell.length_c 82.562 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 16 B CYS 15 1_555 E ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc2 B SG CYS 19 B CYS 18 1_555 E ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 B SG CYS 31 B CYS 30 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc4 B ND1 HIS 33 B HIS 32 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc5 B SG CYS 36 B CYS 35 1_555 E ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc6 B SG CYS 39 B CYS 38 1_555 E ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc7 B SG CYS 57 B CYS 56 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc8 B SG CYS 60 B CYS 59 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4TKP _atom_sites.fract_transf_matrix[1][1] 0.012793 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 201 201 SO4 SO4 . D 4 ZN B 1 101 101 ZN ZN . E 4 ZN B 1 102 102 ZN ZN . F 5 HOH A 1 301 32 HOH HOH . F 5 HOH A 2 302 17 HOH HOH . F 5 HOH A 3 303 23 HOH HOH . F 5 HOH A 4 304 15 HOH HOH . F 5 HOH A 5 305 25 HOH HOH . F 5 HOH A 6 306 2 HOH HOH . F 5 HOH A 7 307 42 HOH HOH . F 5 HOH A 8 308 10 HOH HOH . F 5 HOH A 9 309 48 HOH HOH . F 5 HOH A 10 310 43 HOH HOH . F 5 HOH A 11 311 22 HOH HOH . F 5 HOH A 12 312 47 HOH HOH . F 5 HOH A 13 313 21 HOH HOH . F 5 HOH A 14 314 38 HOH HOH . F 5 HOH A 15 315 1 HOH HOH . F 5 HOH A 16 316 3 HOH HOH . F 5 HOH A 17 317 4 HOH HOH . F 5 HOH A 18 318 5 HOH HOH . F 5 HOH A 19 319 6 HOH HOH . F 5 HOH A 20 320 7 HOH HOH . F 5 HOH A 21 321 8 HOH HOH . F 5 HOH A 22 322 11 HOH HOH . F 5 HOH A 23 323 12 HOH HOH . F 5 HOH A 24 324 13 HOH HOH . F 5 HOH A 25 325 14 HOH HOH . F 5 HOH A 26 326 16 HOH HOH . F 5 HOH A 27 327 18 HOH HOH . F 5 HOH A 28 328 19 HOH HOH . F 5 HOH A 29 329 20 HOH HOH . F 5 HOH A 30 330 24 HOH HOH . F 5 HOH A 31 331 26 HOH HOH . F 5 HOH A 32 332 27 HOH HOH . F 5 HOH A 33 333 28 HOH HOH . F 5 HOH A 34 334 29 HOH HOH . F 5 HOH A 35 335 30 HOH HOH . F 5 HOH A 36 336 33 HOH HOH . F 5 HOH A 37 337 34 HOH HOH . F 5 HOH A 38 338 35 HOH HOH . F 5 HOH A 39 339 36 HOH HOH . F 5 HOH A 40 340 37 HOH HOH . F 5 HOH A 41 341 39 HOH HOH . F 5 HOH A 42 342 40 HOH HOH . F 5 HOH A 43 343 44 HOH HOH . F 5 HOH A 44 344 45 HOH HOH . F 5 HOH A 45 345 46 HOH HOH . F 5 HOH A 46 346 49 HOH HOH . G 5 HOH B 1 201 31 HOH HOH . G 5 HOH B 2 202 9 HOH HOH . G 5 HOH B 3 203 41 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 35.503 _atom_site.Cartn_y 52.18 _atom_site.Cartn_z 50.504 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 27 _model_server_stats.element_count 1 #