data_4TLM
#
_model_server_result.job_id            d5_MUMLOzS_mtCuZhKus_Q 
_model_server_result.datetime_utc      '2024-11-30 23:59:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tlm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":902}' 
#
_entry.id    4TLM 
#
_exptl.entry_id    4TLM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              159.14 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'trans-1-aminocyclobutane-1,3-dicarboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.82 
_cell.angle_gamma         90 
_cell.entry_id            4TLM 
_cell.length_a            203.49 
_cell.length_b            118.43 
_cell.length_c            226.59 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TLM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             O 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 58 A CYS 79 1_555 A SG CYS 287 A CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 399 A CYS 420 1_555 A SG CYS 431 A CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf3 A SG CYS 415 A CYS 436 1_555 A SG CYS 432 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 A SG CYS 713 A CYS 734 1_555 A SG CYS 767 A CYS 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 B SG CYS 62 B CYS 81 1_555 B SG CYS 297 B CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf6 B SG CYS 197 B CYS 216 1_555 D SG CYS 197 D CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf7 B SG CYS 403 B CYS 422 1_555 B SG CYS 430 B CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf8 B SG CYS 410 B CYS 429 1_555 B SG CYS 431 B CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 B SG CYS 710 B CYS 729 1_555 B SG CYS 765 B CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf10 C SG CYS 58 C CYS 79 1_555 C SG CYS 287 C CYS 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf11 C SG CYS 399 C CYS 420 1_555 C SG CYS 431 C CYS 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf12 C SG CYS 415 C CYS 436 1_555 C SG CYS 432 C CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf13 D SG CYS 62 D CYS 81 1_555 D SG CYS 297 D CYS 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf14 D SG CYS 403 D CYS 422 1_555 D SG CYS 430 D CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf15 D SG CYS 410 D CYS 429 1_555 D SG CYS 431 D CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf16 D SG CYS 710 D CYS 729 1_555 D SG CYS 765 D CYS 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
covale ? covale1 A ND2 ASN 40 A ASN 61 1_555 E C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale2 C ND2 ASN 40 C ASN 61 1_555 K C1 NAG . C NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale3 D ND2 ASN 652 D ASN 671 1_555 N C1 NAG . D NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
#
_chem_comp.formula           'C6 H9 N O4' 
_chem_comp.formula_weight    159.14 
_chem_comp.id                JEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'trans-1-aminocyclobutane-1,3-dicarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O05 C03 JEG doub 185 n n 
O04 C03 JEG sing 186 n n 
C03 C02 JEG sing 187 n n 
N01 C02 JEG sing 188 n n 
C02 C11 JEG sing 189 n n 
C02 C06 JEG sing 190 n n 
C11 C07 JEG sing 191 n n 
C06 C07 JEG sing 192 n n 
C07 C08 JEG sing 193 n n 
C08 O09 JEG doub 194 n n 
C08 O10 JEG sing 195 n n 
N01 H1 JEG sing 196 n n 
N01 H2 JEG sing 197 n n 
O04 H4 JEG sing 198 n n 
C06 H5 JEG sing 199 n n 
C06 H6 JEG sing 200 n n 
C07 H7 JEG sing 201 n n 
O10 H8 JEG sing 202 n n 
C11 H9 JEG sing 203 n n 
C11 H10 JEG sing 204 n n 
#
_atom_sites.entry_id                     4TLM 
_atom_sites.fract_transf_matrix[1][1]    0.004914 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001209 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004545 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 901 995 NAG NAG . 
F 3 NAG A 1 902 996 NAG NAG . 
G 3 NAG A 1 903 997 NAG NAG . 
H 4 1AC A 1 904 2001 1AC 1AC . 
I 5 QEM A 1 905 899 QEM QEM . 
J 3 NAG B 1 901 995 NAG NAG . 
K 3 NAG C 1 901 995 NAG NAG . 
L 3 NAG C 1 902 996 NAG NAG . 
M 5 QEM C 1 903 899 QEM QEM . 
N 3 NAG D 1 901 995 NAG NAG . 
O 6 JEG D 1 902 2001 JEG JEG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N01 JEG . . . O 6 -32.872 29.119 270.725 1 188.71 ? N01 JEG 902 D 1 
HETATM 2 C C02 JEG . . . O 6 -33.461 30.232 271.385 1 181.57 ? C02 JEG 902 D 1 
HETATM 3 C C03 JEG . . . O 6 -33.307 31.139 270.111 1 167.02 ? C03 JEG 902 D 1 
HETATM 4 O O04 JEG . . . O 6 -33.455 32.385 270.204 1 182.85 ? O04 JEG 902 D 1 
HETATM 5 O O05 JEG . . . O 6 -33.035 30.622 268.997 1 176.23 ? O05 JEG 902 D 1 
HETATM 6 C C06 JEG . . . O 6 -32.911 30.692 272.718 1 190.47 ? C06 JEG 902 D 1 
HETATM 7 C C07 JEG . . . O 6 -34.125 30.133 273.399 1 211.07 ? C07 JEG 902 D 1 
HETATM 8 C C08 JEG . . . O 6 -34.923 30.719 274.441 1 231.17 ? C08 JEG 902 D 1 
HETATM 9 O O09 JEG . . . O 6 -34.627 31.859 274.888 1 232.45 ? O09 JEG 902 D 1 
HETATM 10 O O10 JEG . . . O 6 -35.911 30.092 274.906 1 237.34 ? O10 JEG 902 D 1 
HETATM 11 C C11 JEG . . . O 6 -34.81 30.088 272.066 1 188.79 ? C11 JEG 902 D 1 
#
_model_server_stats.io_time_ms              157 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           11 
#