data_4TMD # _model_server_result.job_id 4xFjwxPHNM3cj0ptXrQ65w _model_server_result.datetime_utc '2024-11-22 18:17:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tmd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4TMD # _exptl.entry_id 4TMD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TMD _cell.length_a 32.98 _cell.length_b 37.83 _cell.length_c 151.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TMD _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 52 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 68 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 101 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 117 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.047 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4TMD _atom_sites.fract_transf_matrix[1][1] 0.030321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 301 1 IOD IOD . C 2 IOD A 1 302 2 IOD IOD . D 2 IOD A 1 303 3 IOD IOD . E 2 IOD A 1 304 4 IOD IOD . F 2 IOD A 1 305 6 IOD IOD . G 2 IOD A 1 306 7 IOD IOD . H 3 HOH A 1 401 120 HOH HOH . H 3 HOH A 2 402 100 HOH HOH . H 3 HOH A 3 403 44 HOH HOH . H 3 HOH A 4 404 34 HOH HOH . H 3 HOH A 5 405 113 HOH HOH . H 3 HOH A 6 406 105 HOH HOH . H 3 HOH A 7 407 39 HOH HOH . H 3 HOH A 8 408 58 HOH HOH . H 3 HOH A 9 409 56 HOH HOH . H 3 HOH A 10 410 48 HOH HOH . H 3 HOH A 11 411 65 HOH HOH . H 3 HOH A 12 412 109 HOH HOH . H 3 HOH A 13 413 129 HOH HOH . H 3 HOH A 14 414 1 HOH HOH . H 3 HOH A 15 415 5 HOH HOH . H 3 HOH A 16 416 54 HOH HOH . H 3 HOH A 17 417 46 HOH HOH . H 3 HOH A 18 418 81 HOH HOH . H 3 HOH A 19 419 78 HOH HOH . H 3 HOH A 20 420 61 HOH HOH . H 3 HOH A 21 421 22 HOH HOH . H 3 HOH A 22 422 11 HOH HOH . H 3 HOH A 23 423 3 HOH HOH . H 3 HOH A 24 424 26 HOH HOH . H 3 HOH A 25 425 70 HOH HOH . H 3 HOH A 26 426 96 HOH HOH . H 3 HOH A 27 427 80 HOH HOH . H 3 HOH A 28 428 85 HOH HOH . H 3 HOH A 29 429 103 HOH HOH . H 3 HOH A 30 430 124 HOH HOH . H 3 HOH A 31 431 112 HOH HOH . H 3 HOH A 32 432 101 HOH HOH . H 3 HOH A 33 433 110 HOH HOH . H 3 HOH A 34 434 40 HOH HOH . H 3 HOH A 35 435 49 HOH HOH . H 3 HOH A 36 436 90 HOH HOH . H 3 HOH A 37 437 37 HOH HOH . H 3 HOH A 38 438 17 HOH HOH . H 3 HOH A 39 439 67 HOH HOH . H 3 HOH A 40 440 45 HOH HOH . H 3 HOH A 41 441 118 HOH HOH . H 3 HOH A 42 442 12 HOH HOH . H 3 HOH A 43 443 55 HOH HOH . H 3 HOH A 44 444 16 HOH HOH . H 3 HOH A 45 445 122 HOH HOH . H 3 HOH A 46 446 123 HOH HOH . H 3 HOH A 47 447 52 HOH HOH . H 3 HOH A 48 448 23 HOH HOH . H 3 HOH A 49 449 62 HOH HOH . H 3 HOH A 50 450 74 HOH HOH . H 3 HOH A 51 451 94 HOH HOH . H 3 HOH A 52 452 82 HOH HOH . H 3 HOH A 53 453 68 HOH HOH . H 3 HOH A 54 454 72 HOH HOH . H 3 HOH A 55 455 121 HOH HOH . H 3 HOH A 56 456 83 HOH HOH . H 3 HOH A 57 457 89 HOH HOH . H 3 HOH A 58 458 63 HOH HOH . H 3 HOH A 59 459 77 HOH HOH . H 3 HOH A 60 460 114 HOH HOH . H 3 HOH A 61 461 73 HOH HOH . H 3 HOH A 62 462 79 HOH HOH . H 3 HOH A 63 463 125 HOH HOH . H 3 HOH A 64 464 64 HOH HOH . H 3 HOH A 65 465 87 HOH HOH . H 3 HOH A 66 466 35 HOH HOH . H 3 HOH A 67 467 57 HOH HOH . H 3 HOH A 68 468 2 HOH HOH . H 3 HOH A 69 469 4 HOH HOH . H 3 HOH A 70 470 6 HOH HOH . H 3 HOH A 71 471 7 HOH HOH . H 3 HOH A 72 472 8 HOH HOH . H 3 HOH A 73 473 9 HOH HOH . H 3 HOH A 74 474 10 HOH HOH . H 3 HOH A 75 475 13 HOH HOH . H 3 HOH A 76 476 14 HOH HOH . H 3 HOH A 77 477 15 HOH HOH . H 3 HOH A 78 478 18 HOH HOH . H 3 HOH A 79 479 19 HOH HOH . H 3 HOH A 80 480 20 HOH HOH . H 3 HOH A 81 481 21 HOH HOH . H 3 HOH A 82 482 24 HOH HOH . H 3 HOH A 83 483 25 HOH HOH . H 3 HOH A 84 484 27 HOH HOH . H 3 HOH A 85 485 28 HOH HOH . H 3 HOH A 86 486 29 HOH HOH . H 3 HOH A 87 487 30 HOH HOH . H 3 HOH A 88 488 31 HOH HOH . H 3 HOH A 89 489 32 HOH HOH . H 3 HOH A 90 490 33 HOH HOH . H 3 HOH A 91 491 36 HOH HOH . H 3 HOH A 92 492 38 HOH HOH . H 3 HOH A 93 493 41 HOH HOH . H 3 HOH A 94 494 42 HOH HOH . H 3 HOH A 95 495 43 HOH HOH . H 3 HOH A 96 496 47 HOH HOH . H 3 HOH A 97 497 50 HOH HOH . H 3 HOH A 98 498 51 HOH HOH . H 3 HOH A 99 499 53 HOH HOH . H 3 HOH A 100 500 59 HOH HOH . H 3 HOH A 101 501 60 HOH HOH . H 3 HOH A 102 502 66 HOH HOH . H 3 HOH A 103 503 69 HOH HOH . H 3 HOH A 104 504 71 HOH HOH . H 3 HOH A 105 505 75 HOH HOH . H 3 HOH A 106 506 76 HOH HOH . H 3 HOH A 107 507 84 HOH HOH . H 3 HOH A 108 508 86 HOH HOH . H 3 HOH A 109 509 88 HOH HOH . H 3 HOH A 110 510 91 HOH HOH . H 3 HOH A 111 511 92 HOH HOH . H 3 HOH A 112 512 93 HOH HOH . H 3 HOH A 113 513 95 HOH HOH . H 3 HOH A 114 514 97 HOH HOH . H 3 HOH A 115 515 98 HOH HOH . H 3 HOH A 116 516 99 HOH HOH . H 3 HOH A 117 517 102 HOH HOH . H 3 HOH A 118 518 104 HOH HOH . H 3 HOH A 119 519 106 HOH HOH . H 3 HOH A 120 520 107 HOH HOH . H 3 HOH A 121 521 108 HOH HOH . H 3 HOH A 122 522 111 HOH HOH . H 3 HOH A 123 523 115 HOH HOH . H 3 HOH A 124 524 116 HOH HOH . H 3 HOH A 125 525 117 HOH HOH . H 3 HOH A 126 526 119 HOH HOH . H 3 HOH A 127 527 126 HOH HOH . H 3 HOH A 128 528 127 HOH HOH . H 3 HOH A 129 529 128 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.847 _atom_site.Cartn_y 23.572 _atom_site.Cartn_z 25.38 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 48.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 305 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #