data_4TMN # _model_server_result.job_id vtbtzzPZMaIjLzhOxD1g2Q _model_server_result.datetime_utc '2024-10-28 02:39:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tmn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":320}' # _entry.id 4TMN # _exptl.entry_id 4TMN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TMN _cell.length_a 94.1 _cell.length_b 94.1 _cell.length_c 131.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TMN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 57 E ASP 57 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc2 A OD2 ASP 57 E ASP 57 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc3 A OD1 ASP 59 E ASP 59 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc4 A O GLN 61 E GLN 61 1_555 E CA CA . E CA 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc5 A OD1 ASP 138 E ASP 138 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc6 A NE2 HIS 142 E HIS 142 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc7 A NE2 HIS 146 E HIS 146 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc8 A OE1 GLU 166 E GLU 166 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc9 A OE2 GLU 177 E GLU 177 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc10 A OE1 GLU 177 E GLU 177 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc11 A OE2 GLU 177 E GLU 177 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc12 A O ASN 183 E ASN 183 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc13 A OD2 ASP 185 E ASP 185 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc14 A OD1 ASP 185 E ASP 185 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc15 A O GLU 187 E GLU 187 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc16 A OE2 GLU 190 E GLU 190 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc17 A OE1 GLU 190 E GLU 190 1_555 C CA CA . E CA 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc18 A OE2 GLU 190 E GLU 190 1_555 D CA CA . E CA 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc19 A O TYR 193 E TYR 193 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc20 A O THR 194 E THR 194 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc21 A OG1 THR 194 E THR 194 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc22 A O ILE 197 E ILE 197 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc23 A OD1 ASP 200 E ASP 200 1_555 F CA CA . E CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc24 B O1P 0PK . E 0PK 317 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc25 B O2P 0PK . E 0PK 317 1_555 G ZN ZN . E ZN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc26 C CA CA . E CA 318 1_555 H O HOH . E HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc27 D CA CA . E CA 319 1_555 H O HOH . E HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc28 D CA CA . E CA 319 1_555 H O HOH . E HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc29 E CA CA . E CA 320 1_555 H O HOH . E HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc30 E CA CA . E CA 320 1_555 H O HOH . E HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc31 E CA CA . E CA 320 1_555 H O HOH . E HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc32 F CA CA . E CA 321 1_555 H O HOH . E HOH 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc33 F CA CA . E CA 321 1_555 H O HOH . E HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4TMN _atom_sites.fract_transf_matrix[1][1] 0.010627 _atom_sites.fract_transf_matrix[1][2] 0.006135 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0PK E 1 317 1 0PK CBZ . C 3 CA E 1 318 1 CA CA . D 3 CA E 1 319 2 CA CA . E 3 CA E 1 320 3 CA CA . F 3 CA E 1 321 4 CA CA . G 4 ZN E 1 322 5 ZN ZN . H 5 HOH E 1 323 332 HOH HOH . H 5 HOH E 2 324 334 HOH HOH . H 5 HOH E 3 325 335 HOH HOH . H 5 HOH E 4 326 337 HOH HOH . H 5 HOH E 5 327 338 HOH HOH . H 5 HOH E 6 328 339 HOH HOH . H 5 HOH E 7 329 340 HOH HOH . H 5 HOH E 8 330 341 HOH HOH . H 5 HOH E 9 331 342 HOH HOH . H 5 HOH E 10 332 343 HOH HOH . H 5 HOH E 11 333 344 HOH HOH . H 5 HOH E 12 334 345 HOH HOH . H 5 HOH E 13 335 346 HOH HOH . H 5 HOH E 14 336 347 HOH HOH . H 5 HOH E 15 337 348 HOH HOH . H 5 HOH E 16 338 349 HOH HOH . H 5 HOH E 17 339 350 HOH HOH . H 5 HOH E 18 340 351 HOH HOH . H 5 HOH E 19 341 352 HOH HOH . H 5 HOH E 20 342 353 HOH HOH . H 5 HOH E 21 343 354 HOH HOH . H 5 HOH E 22 344 355 HOH HOH . H 5 HOH E 23 345 356 HOH HOH . H 5 HOH E 24 346 357 HOH HOH . H 5 HOH E 25 347 358 HOH HOH . H 5 HOH E 26 348 359 HOH HOH . H 5 HOH E 27 349 361 HOH HOH . H 5 HOH E 28 350 366 HOH HOH . H 5 HOH E 29 351 367 HOH HOH . H 5 HOH E 30 352 368 HOH HOH . H 5 HOH E 31 353 370 HOH HOH . H 5 HOH E 32 354 371 HOH HOH . H 5 HOH E 33 355 373 HOH HOH . H 5 HOH E 34 356 374 HOH HOH . H 5 HOH E 35 357 375 HOH HOH . H 5 HOH E 36 358 376 HOH HOH . H 5 HOH E 37 359 377 HOH HOH . H 5 HOH E 38 360 378 HOH HOH . H 5 HOH E 39 361 379 HOH HOH . H 5 HOH E 40 362 380 HOH HOH . H 5 HOH E 41 363 381 HOH HOH . H 5 HOH E 42 364 383 HOH HOH . H 5 HOH E 43 365 384 HOH HOH . H 5 HOH E 44 366 386 HOH HOH . H 5 HOH E 45 367 387 HOH HOH . H 5 HOH E 46 368 389 HOH HOH . H 5 HOH E 47 369 390 HOH HOH . H 5 HOH E 48 370 391 HOH HOH . H 5 HOH E 49 371 393 HOH HOH . H 5 HOH E 50 372 395 HOH HOH . H 5 HOH E 51 373 398 HOH HOH . H 5 HOH E 52 374 403 HOH HOH . H 5 HOH E 53 375 404 HOH HOH . H 5 HOH E 54 376 405 HOH HOH . H 5 HOH E 55 377 407 HOH HOH . H 5 HOH E 56 378 408 HOH HOH . H 5 HOH E 57 379 410 HOH HOH . H 5 HOH E 58 380 412 HOH HOH . H 5 HOH E 59 381 413 HOH HOH . H 5 HOH E 60 382 414 HOH HOH . H 5 HOH E 61 383 415 HOH HOH . H 5 HOH E 62 384 416 HOH HOH . H 5 HOH E 63 385 418 HOH HOH . H 5 HOH E 64 386 419 HOH HOH . H 5 HOH E 65 387 420 HOH HOH . H 5 HOH E 66 388 422 HOH HOH . H 5 HOH E 67 389 423 HOH HOH . H 5 HOH E 68 390 424 HOH HOH . H 5 HOH E 69 391 425 HOH HOH . H 5 HOH E 70 392 426 HOH HOH . H 5 HOH E 71 393 427 HOH HOH . H 5 HOH E 72 394 428 HOH HOH . H 5 HOH E 73 395 431 HOH HOH . H 5 HOH E 74 396 433 HOH HOH . H 5 HOH E 75 397 434 HOH HOH . H 5 HOH E 76 398 438 HOH HOH . H 5 HOH E 77 399 439 HOH HOH . H 5 HOH E 78 400 441 HOH HOH . H 5 HOH E 79 401 444 HOH HOH . H 5 HOH E 80 402 445 HOH HOH . H 5 HOH E 81 403 446 HOH HOH . H 5 HOH E 82 404 448 HOH HOH . H 5 HOH E 83 405 450 HOH HOH . H 5 HOH E 84 406 452 HOH HOH . H 5 HOH E 85 407 454 HOH HOH . H 5 HOH E 86 408 455 HOH HOH . H 5 HOH E 87 409 457 HOH HOH . H 5 HOH E 88 410 459 HOH HOH . H 5 HOH E 89 411 461 HOH HOH . H 5 HOH E 90 412 463 HOH HOH . H 5 HOH E 91 413 464 HOH HOH . H 5 HOH E 92 414 465 HOH HOH . H 5 HOH E 93 415 466 HOH HOH . H 5 HOH E 94 416 467 HOH HOH . H 5 HOH E 95 417 468 HOH HOH . H 5 HOH E 96 418 469 HOH HOH . H 5 HOH E 97 419 470 HOH HOH . H 5 HOH E 98 420 471 HOH HOH . H 5 HOH E 99 421 472 HOH HOH . H 5 HOH E 100 422 474 HOH HOH . H 5 HOH E 101 423 475 HOH HOH . H 5 HOH E 102 424 476 HOH HOH . H 5 HOH E 103 425 477 HOH HOH . H 5 HOH E 104 426 478 HOH HOH . H 5 HOH E 105 427 479 HOH HOH . H 5 HOH E 106 428 480 HOH HOH . H 5 HOH E 107 429 481 HOH HOH . H 5 HOH E 108 430 482 HOH HOH . H 5 HOH E 109 431 483 HOH HOH . H 5 HOH E 110 432 484 HOH HOH . H 5 HOH E 111 433 485 HOH HOH . H 5 HOH E 112 434 486 HOH HOH . H 5 HOH E 113 435 487 HOH HOH . H 5 HOH E 114 436 488 HOH HOH . H 5 HOH E 115 437 489 HOH HOH . H 5 HOH E 116 438 490 HOH HOH . H 5 HOH E 117 439 491 HOH HOH . H 5 HOH E 118 440 493 HOH HOH . H 5 HOH E 119 441 494 HOH HOH . H 5 HOH E 120 442 495 HOH HOH . H 5 HOH E 121 443 496 HOH HOH . H 5 HOH E 122 444 501 HOH HOH . H 5 HOH E 123 445 502 HOH HOH . H 5 HOH E 124 446 503 HOH HOH . H 5 HOH E 125 447 504 HOH HOH . H 5 HOH E 126 448 505 HOH HOH . H 5 HOH E 127 449 506 HOH HOH . H 5 HOH E 128 450 507 HOH HOH . H 5 HOH E 129 451 508 HOH HOH . H 5 HOH E 130 452 509 HOH HOH . H 5 HOH E 131 453 510 HOH HOH . H 5 HOH E 132 454 512 HOH HOH . H 5 HOH E 133 455 513 HOH HOH . H 5 HOH E 134 456 514 HOH HOH . H 5 HOH E 135 457 515 HOH HOH . H 5 HOH E 136 458 516 HOH HOH . H 5 HOH E 137 459 518 HOH HOH . H 5 HOH E 138 460 519 HOH HOH . H 5 HOH E 139 461 520 HOH HOH . H 5 HOH E 140 462 521 HOH HOH . H 5 HOH E 141 463 523 HOH HOH . H 5 HOH E 142 464 524 HOH HOH . H 5 HOH E 143 465 525 HOH HOH . H 5 HOH E 144 466 526 HOH HOH . H 5 HOH E 145 467 527 HOH HOH . H 5 HOH E 146 468 528 HOH HOH . H 5 HOH E 147 469 530 HOH HOH . H 5 HOH E 148 470 531 HOH HOH . H 5 HOH E 149 471 532 HOH HOH . H 5 HOH E 150 472 534 HOH HOH . H 5 HOH E 151 473 535 HOH HOH . H 5 HOH E 152 474 536 HOH HOH . H 5 HOH E 153 475 537 HOH HOH . H 5 HOH E 154 476 538 HOH HOH . H 5 HOH E 155 477 539 HOH HOH . H 5 HOH E 156 478 542 HOH HOH . H 5 HOH E 157 479 543 HOH HOH . H 5 HOH E 158 480 544 HOH HOH . H 5 HOH E 159 481 385 HOH HOH . H 5 HOH E 160 482 540 HOH HOH . H 5 HOH E 161 483 331 HOH HOH . H 5 HOH E 162 484 362 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 14.589 _atom_site.Cartn_y 45.877 _atom_site.Cartn_z 15.687 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 11.03 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 320 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #