data_4TPM
#
_model_server_result.job_id            rK1mXhNjGiYe-0N-uxwLDA 
_model_server_result.datetime_utc      '2024-10-11 02:19:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tpm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":2003}' 
#
_entry.id    4TPM 
#
_exptl.entry_id    4TPM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4TPM 
_cell.length_a            253.878 
_cell.length_b            253.878 
_cell.length_c            253.878 
_cell.Z_PDB               96 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TPM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        196 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,X 1 1,4,5 
B,N,O,P,Q,R,S,T,U,V,W,Y 2 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 
3 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 
4 'crystal symmetry operation' 18_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 126.939 126.939 
5 'crystal symmetry operation' 48_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 126.939 126.939 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 60 A CYS 488 1_555 A SG CYS 64 A CYS 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 B SG CYS 60 B CYS 488 1_555 B SG CYS 64 B CYS 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
metalc ? metalc1 A NE2 HIS 91 A HIS 519 1_555 M ZN ZN . A ZN 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc2 A NE2 HIS 125 A HIS 553 1_555 M ZN ZN . A ZN 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc3 A OD1 ASP 126 A ASP 554 1_555 L ZN ZN . A ZN 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc4 A OD2 ASP 126 A ASP 554 1_555 L ZN ZN . A ZN 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc5 A OD2 ASP 126 A ASP 554 1_555 M ZN ZN . A ZN 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
metalc ? metalc6 A OD1 ASP 236 A ASP 664 1_555 M ZN ZN . A ZN 2011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc7 L ZN ZN . A ZN 2010 1_555 X O HOH . A HOH 2123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc8 L ZN ZN . A ZN 2010 1_555 X O HOH . A HOH 2124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? 
metalc ? metalc9 L ZN ZN . A ZN 2010 1_555 X O HOH . A HOH 2125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc10 B NE2 HIS 91 B HIS 519 1_555 V ZN ZN . B ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc11 B NE2 HIS 125 B HIS 553 1_555 V ZN ZN . B ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc12 B OD2 ASP 126 B ASP 554 1_555 V ZN ZN . B ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc13 B OD1 ASP 126 B ASP 554 1_555 W ZN ZN . B ZN 2010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc14 B OD1 ASP 236 B ASP 664 1_555 V ZN ZN . B ZN 2009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc15 V ZN ZN . B ZN 2009 1_555 Y O HOH . B HOH 2134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc16 W ZN ZN . B ZN 2010 1_555 Y O HOH . B HOH 2134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc17 W ZN ZN . B ZN 2010 1_555 Y O HOH . B HOH 2135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
metalc ? metalc18 W ZN ZN . B ZN 2010 1_555 Y O HOH . B HOH 2136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 361 n n 
S O2 SO4 doub 362 n n 
S O3 SO4 sing 363 n n 
S O4 SO4 sing 364 n n 
#
_atom_sites.entry_id                     4TPM 
_atom_sites.fract_transf_matrix[1][1]    0.003939 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003939 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 2001 2001 SO4 SO4 . 
D 2 SO4 A 1 2002 2002 SO4 SO4 . 
E 2 SO4 A 1 2003 2003 SO4 SO4 . 
F 2 SO4 A 1 2004 2004 SO4 SO4 . 
G 2 SO4 A 1 2005 2005 SO4 SO4 . 
H 2 SO4 A 1 2006 2008 SO4 SO4 . 
I 2 SO4 A 1 2007 2009 SO4 SO4 . 
J 3 GOL A 1 2008 1 GOL GOL . 
K 4 35E A 1 2009 1 35E UNL . 
L 5 ZN A 1 2010 3 ZN ZN . 
M 5 ZN A 1 2011 4 ZN ZN . 
N 2 SO4 B 1 2001 2001 SO4 SO4 . 
O 2 SO4 B 1 2002 2002 SO4 SO4 . 
P 2 SO4 B 1 2003 2003 SO4 SO4 . 
Q 2 SO4 B 1 2004 2005 SO4 SO4 . 
R 2 SO4 B 1 2005 2006 SO4 SO4 . 
S 2 SO4 B 1 2006 2007 SO4 SO4 . 
T 2 SO4 B 1 2007 2008 SO4 SO4 . 
U 4 35E B 1 2008 1 35E UNL . 
V 5 ZN B 1 2009 1 ZN ZN . 
W 5 ZN B 1 2010 2 ZN ZN . 
X 6 HOH A 1 2101 22 HOH HOH . 
X 6 HOH A 2 2102 42 HOH HOH . 
X 6 HOH A 3 2103 18 HOH HOH . 
X 6 HOH A 4 2104 1 HOH HOH . 
X 6 HOH A 5 2105 2 HOH HOH . 
X 6 HOH A 6 2106 5 HOH HOH . 
X 6 HOH A 7 2107 6 HOH HOH . 
X 6 HOH A 8 2108 7 HOH HOH . 
X 6 HOH A 9 2109 8 HOH HOH . 
X 6 HOH A 10 2110 9 HOH HOH . 
X 6 HOH A 11 2111 12 HOH HOH . 
X 6 HOH A 12 2112 13 HOH HOH . 
X 6 HOH A 13 2113 16 HOH HOH . 
X 6 HOH A 14 2114 17 HOH HOH . 
X 6 HOH A 15 2115 20 HOH HOH . 
X 6 HOH A 16 2116 26 HOH HOH . 
X 6 HOH A 17 2117 32 HOH HOH . 
X 6 HOH A 18 2118 34 HOH HOH . 
X 6 HOH A 19 2119 44 HOH HOH . 
X 6 HOH A 20 2120 45 HOH HOH . 
X 6 HOH A 21 2121 53 HOH HOH . 
X 6 HOH A 22 2122 58 HOH HOH . 
X 6 HOH A 23 2123 59 HOH HOH . 
X 6 HOH A 24 2124 60 HOH HOH . 
X 6 HOH A 25 2125 61 HOH HOH . 
X 6 HOH A 26 2126 63 HOH HOH . 
X 6 HOH A 27 2127 64 HOH HOH . 
Y 6 HOH B 1 2101 3 HOH HOH . 
Y 6 HOH B 2 2102 35 HOH HOH . 
Y 6 HOH B 3 2103 30 HOH HOH . 
Y 6 HOH B 4 2104 4 HOH HOH . 
Y 6 HOH B 5 2105 10 HOH HOH . 
Y 6 HOH B 6 2106 11 HOH HOH . 
Y 6 HOH B 7 2107 14 HOH HOH . 
Y 6 HOH B 8 2108 15 HOH HOH . 
Y 6 HOH B 9 2109 19 HOH HOH . 
Y 6 HOH B 10 2110 21 HOH HOH . 
Y 6 HOH B 11 2111 23 HOH HOH . 
Y 6 HOH B 12 2112 24 HOH HOH . 
Y 6 HOH B 13 2113 25 HOH HOH . 
Y 6 HOH B 14 2114 27 HOH HOH . 
Y 6 HOH B 15 2115 28 HOH HOH . 
Y 6 HOH B 16 2116 29 HOH HOH . 
Y 6 HOH B 17 2117 31 HOH HOH . 
Y 6 HOH B 18 2118 33 HOH HOH . 
Y 6 HOH B 19 2119 36 HOH HOH . 
Y 6 HOH B 20 2120 37 HOH HOH . 
Y 6 HOH B 21 2121 38 HOH HOH . 
Y 6 HOH B 22 2122 39 HOH HOH . 
Y 6 HOH B 23 2123 40 HOH HOH . 
Y 6 HOH B 24 2124 41 HOH HOH . 
Y 6 HOH B 25 2125 43 HOH HOH . 
Y 6 HOH B 26 2126 46 HOH HOH . 
Y 6 HOH B 27 2127 47 HOH HOH . 
Y 6 HOH B 28 2128 48 HOH HOH . 
Y 6 HOH B 29 2129 49 HOH HOH . 
Y 6 HOH B 30 2130 50 HOH HOH . 
Y 6 HOH B 31 2131 51 HOH HOH . 
Y 6 HOH B 32 2132 52 HOH HOH . 
Y 6 HOH B 33 2133 54 HOH HOH . 
Y 6 HOH B 34 2134 55 HOH HOH . 
Y 6 HOH B 35 2135 56 HOH HOH . 
Y 6 HOH B 36 2136 57 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . P 2 -40.914 37.769 10.41 1 144.84 ? S SO4 2003 B 1 
HETATM 2 O O1 SO4 . . . P 2 -40.015 37.189 9.386 1 143.84 ? O1 SO4 2003 B 1 
HETATM 3 O O2 SO4 . . . P 2 -42.325 37.638 9.974 1 137.28 ? O2 SO4 2003 B 1 
HETATM 4 O O3 SO4 . . . P 2 -40.719 37.057 11.694 1 139.15 ? O3 SO4 2003 B 1 
HETATM 5 O O4 SO4 . . . P 2 -40.586 39.201 10.588 1 144.45 ? O4 SO4 2003 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           5 
#