data_4TQQ # _model_server_result.job_id w0wV1SAS0afzOjRmPkhPEQ _model_server_result.datetime_utc '2024-11-23 18:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":304}' # _entry.id 4TQQ # _exptl.entry_id 4TQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 250.29 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UBIQUINONE-1 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TQQ _cell.length_a 102.484 _cell.length_b 102.484 _cell.length_c 239.939 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 H FE FE2 . L FE2 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 H FE FE2 . L FE2 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc3 H FE FE2 . L FE2 305 1_555 C NE2 HIS 219 M HIS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc4 H FE FE2 . L FE2 305 1_555 C OE1 GLU 234 M GLU 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc5 H FE FE2 . L FE2 305 1_555 C OE2 GLU 234 M GLU 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc6 H FE FE2 . L FE2 305 1_555 C NE2 HIS 266 M HIS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? # _chem_comp.formula 'C14 H18 O4' _chem_comp.formula_weight 250.29 _chem_comp.id UQ1 _chem_comp.mon_nstd_flag . _chem_comp.name UBIQUINONE-1 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 UQ1 doub 805 n n C1 C2 UQ1 sing 806 n n C1 C6 UQ1 sing 807 n n C2 O2 UQ1 sing 808 n n C2 C3 UQ1 doub 809 n n O2 CM2 UQ1 sing 810 n n CM2 HM21 UQ1 sing 811 n n CM2 HM22 UQ1 sing 812 n n CM2 HM23 UQ1 sing 813 n n C3 O3 UQ1 sing 814 n n C3 C4 UQ1 sing 815 n n O3 CM3 UQ1 sing 816 n n CM3 HM31 UQ1 sing 817 n n CM3 HM32 UQ1 sing 818 n n CM3 HM33 UQ1 sing 819 n n C4 O4 UQ1 doub 820 n n C4 C5 UQ1 sing 821 n n C5 CM5 UQ1 sing 822 n n C5 C6 UQ1 doub 823 n n CM5 HM51 UQ1 sing 824 n n CM5 HM52 UQ1 sing 825 n n CM5 HM53 UQ1 sing 826 n n C6 C7 UQ1 sing 827 n n C7 C8 UQ1 sing 828 n n C7 H71 UQ1 sing 829 n n C7 H72 UQ1 sing 830 n n C8 C9 UQ1 doub 831 n n C8 H8 UQ1 sing 832 n n C9 C10 UQ1 sing 833 n n C9 C11 UQ1 sing 834 n n C10 H101 UQ1 sing 835 n n C10 H102 UQ1 sing 836 n n C10 H103 UQ1 sing 837 n n C11 H111 UQ1 sing 838 n n C11 H112 UQ1 sing 839 n n C11 H113 UQ1 sing 840 n n # _atom_sites.entry_id 4TQQ _atom_sites.fract_transf_matrix[1][1] 0.009758 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004168 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BPH L 1 301 1 BPH BPH . E 5 BCL L 1 302 1 BCL BCL . F 5 BCL L 1 303 2 BCL BCL . G 6 UQ1 L 1 304 1 UQ1 UQ1 . H 7 FE2 L 1 305 1 FE2 FE2 . I 8 U10 M 1 401 1 U10 U10 . J 5 BCL M 1 402 3 BCL BCL . K 5 BCL M 1 403 4 BCL BCL . L 4 BPH M 1 404 2 BPH BPH . M 9 HOH H 1 301 77 HOH HOH . M 9 HOH H 2 302 17 HOH HOH . M 9 HOH H 3 303 86 HOH HOH . M 9 HOH H 4 304 185 HOH HOH . M 9 HOH H 5 305 154 HOH HOH . M 9 HOH H 6 306 157 HOH HOH . M 9 HOH H 7 307 184 HOH HOH . M 9 HOH H 8 308 182 HOH HOH . M 9 HOH H 9 309 2 HOH HOH . M 9 HOH H 10 310 15 HOH HOH . M 9 HOH H 11 311 16 HOH HOH . M 9 HOH H 12 312 18 HOH HOH . M 9 HOH H 13 313 25 HOH HOH . M 9 HOH H 14 314 31 HOH HOH . M 9 HOH H 15 315 32 HOH HOH . M 9 HOH H 16 316 33 HOH HOH . M 9 HOH H 17 317 41 HOH HOH . M 9 HOH H 18 318 44 HOH HOH . M 9 HOH H 19 319 45 HOH HOH . M 9 HOH H 20 320 47 HOH HOH . M 9 HOH H 21 321 48 HOH HOH . M 9 HOH H 22 322 51 HOH HOH . M 9 HOH H 23 323 52 HOH HOH . M 9 HOH H 24 324 56 HOH HOH . M 9 HOH H 25 325 58 HOH HOH . M 9 HOH H 26 326 59 HOH HOH . M 9 HOH H 27 327 61 HOH HOH . M 9 HOH H 28 328 64 HOH HOH . M 9 HOH H 29 329 65 HOH HOH . M 9 HOH H 30 330 66 HOH HOH . M 9 HOH H 31 331 67 HOH HOH . M 9 HOH H 32 332 72 HOH HOH . M 9 HOH H 33 333 74 HOH HOH . M 9 HOH H 34 334 75 HOH HOH . M 9 HOH H 35 335 78 HOH HOH . M 9 HOH H 36 336 80 HOH HOH . M 9 HOH H 37 337 90 HOH HOH . M 9 HOH H 38 338 94 HOH HOH . M 9 HOH H 39 339 97 HOH HOH . M 9 HOH H 40 340 99 HOH HOH . M 9 HOH H 41 341 101 HOH HOH . M 9 HOH H 42 342 105 HOH HOH . M 9 HOH H 43 343 106 HOH HOH . M 9 HOH H 44 344 111 HOH HOH . M 9 HOH H 45 345 112 HOH HOH . M 9 HOH H 46 346 113 HOH HOH . M 9 HOH H 47 347 114 HOH HOH . M 9 HOH H 48 348 115 HOH HOH . M 9 HOH H 49 349 118 HOH HOH . M 9 HOH H 50 350 121 HOH HOH . M 9 HOH H 51 351 122 HOH HOH . M 9 HOH H 52 352 123 HOH HOH . M 9 HOH H 53 353 124 HOH HOH . M 9 HOH H 54 354 127 HOH HOH . M 9 HOH H 55 355 142 HOH HOH . M 9 HOH H 56 356 148 HOH HOH . M 9 HOH H 57 357 149 HOH HOH . M 9 HOH H 58 358 161 HOH HOH . M 9 HOH H 59 359 165 HOH HOH . M 9 HOH H 60 360 166 HOH HOH . M 9 HOH H 61 361 167 HOH HOH . M 9 HOH H 62 362 169 HOH HOH . M 9 HOH H 63 363 181 HOH HOH . M 9 HOH H 64 364 186 HOH HOH . N 9 HOH L 1 401 85 HOH HOH . N 9 HOH L 2 402 104 HOH HOH . N 9 HOH L 3 403 176 HOH HOH . N 9 HOH L 4 404 62 HOH HOH . N 9 HOH L 5 405 81 HOH HOH . N 9 HOH L 6 406 126 HOH HOH . N 9 HOH L 7 407 4 HOH HOH . N 9 HOH L 8 408 8 HOH HOH . N 9 HOH L 9 409 10 HOH HOH . N 9 HOH L 10 410 20 HOH HOH . N 9 HOH L 11 411 26 HOH HOH . N 9 HOH L 12 412 27 HOH HOH . N 9 HOH L 13 413 28 HOH HOH . N 9 HOH L 14 414 29 HOH HOH . N 9 HOH L 15 415 34 HOH HOH . N 9 HOH L 16 416 36 HOH HOH . N 9 HOH L 17 417 37 HOH HOH . N 9 HOH L 18 418 38 HOH HOH . N 9 HOH L 19 419 39 HOH HOH . N 9 HOH L 20 420 46 HOH HOH . N 9 HOH L 21 421 50 HOH HOH . N 9 HOH L 22 422 54 HOH HOH . N 9 HOH L 23 423 55 HOH HOH . N 9 HOH L 24 424 63 HOH HOH . N 9 HOH L 25 425 70 HOH HOH . N 9 HOH L 26 426 76 HOH HOH . N 9 HOH L 27 427 79 HOH HOH . N 9 HOH L 28 428 84 HOH HOH . N 9 HOH L 29 429 88 HOH HOH . N 9 HOH L 30 430 93 HOH HOH . N 9 HOH L 31 431 98 HOH HOH . N 9 HOH L 32 432 107 HOH HOH . N 9 HOH L 33 433 109 HOH HOH . N 9 HOH L 34 434 117 HOH HOH . N 9 HOH L 35 435 120 HOH HOH . N 9 HOH L 36 436 125 HOH HOH . N 9 HOH L 37 437 129 HOH HOH . N 9 HOH L 38 438 130 HOH HOH . N 9 HOH L 39 439 131 HOH HOH . N 9 HOH L 40 440 135 HOH HOH . N 9 HOH L 41 441 139 HOH HOH . N 9 HOH L 42 442 141 HOH HOH . N 9 HOH L 43 443 143 HOH HOH . N 9 HOH L 44 444 144 HOH HOH . N 9 HOH L 45 445 146 HOH HOH . N 9 HOH L 46 446 153 HOH HOH . N 9 HOH L 47 447 156 HOH HOH . N 9 HOH L 48 448 158 HOH HOH . N 9 HOH L 49 449 159 HOH HOH . N 9 HOH L 50 450 162 HOH HOH . N 9 HOH L 51 451 163 HOH HOH . N 9 HOH L 52 452 168 HOH HOH . N 9 HOH L 53 453 172 HOH HOH . O 9 HOH M 1 501 49 HOH HOH . O 9 HOH M 2 502 175 HOH HOH . O 9 HOH M 3 503 155 HOH HOH . O 9 HOH M 4 504 73 HOH HOH . O 9 HOH M 5 505 133 HOH HOH . O 9 HOH M 6 506 147 HOH HOH . O 9 HOH M 7 507 24 HOH HOH . O 9 HOH M 8 508 69 HOH HOH . O 9 HOH M 9 509 180 HOH HOH . O 9 HOH M 10 510 1 HOH HOH . O 9 HOH M 11 511 3 HOH HOH . O 9 HOH M 12 512 5 HOH HOH . O 9 HOH M 13 513 6 HOH HOH . O 9 HOH M 14 514 7 HOH HOH . O 9 HOH M 15 515 9 HOH HOH . O 9 HOH M 16 516 11 HOH HOH . O 9 HOH M 17 517 12 HOH HOH . O 9 HOH M 18 518 13 HOH HOH . O 9 HOH M 19 519 14 HOH HOH . O 9 HOH M 20 520 19 HOH HOH . O 9 HOH M 21 521 21 HOH HOH . O 9 HOH M 22 522 22 HOH HOH . O 9 HOH M 23 523 23 HOH HOH . O 9 HOH M 24 524 30 HOH HOH . O 9 HOH M 25 525 35 HOH HOH . O 9 HOH M 26 526 40 HOH HOH . O 9 HOH M 27 527 42 HOH HOH . O 9 HOH M 28 528 43 HOH HOH . O 9 HOH M 29 529 53 HOH HOH . O 9 HOH M 30 530 57 HOH HOH . O 9 HOH M 31 531 60 HOH HOH . O 9 HOH M 32 532 68 HOH HOH . O 9 HOH M 33 533 71 HOH HOH . O 9 HOH M 34 534 82 HOH HOH . O 9 HOH M 35 535 83 HOH HOH . O 9 HOH M 36 536 87 HOH HOH . O 9 HOH M 37 537 89 HOH HOH . O 9 HOH M 38 538 91 HOH HOH . O 9 HOH M 39 539 92 HOH HOH . O 9 HOH M 40 540 95 HOH HOH . O 9 HOH M 41 541 96 HOH HOH . O 9 HOH M 42 542 100 HOH HOH . O 9 HOH M 43 543 102 HOH HOH . O 9 HOH M 44 544 103 HOH HOH . O 9 HOH M 45 545 108 HOH HOH . O 9 HOH M 46 546 110 HOH HOH . O 9 HOH M 47 547 116 HOH HOH . O 9 HOH M 48 548 119 HOH HOH . O 9 HOH M 49 549 128 HOH HOH . O 9 HOH M 50 550 132 HOH HOH . O 9 HOH M 51 551 134 HOH HOH . O 9 HOH M 52 552 136 HOH HOH . O 9 HOH M 53 553 137 HOH HOH . O 9 HOH M 54 554 138 HOH HOH . O 9 HOH M 55 555 140 HOH HOH . O 9 HOH M 56 556 145 HOH HOH . O 9 HOH M 57 557 150 HOH HOH . O 9 HOH M 58 558 151 HOH HOH . O 9 HOH M 59 559 152 HOH HOH . O 9 HOH M 60 560 160 HOH HOH . O 9 HOH M 61 561 164 HOH HOH . O 9 HOH M 62 562 170 HOH HOH . O 9 HOH M 63 563 171 HOH HOH . O 9 HOH M 64 564 173 HOH HOH . O 9 HOH M 65 565 174 HOH HOH . O 9 HOH M 66 566 177 HOH HOH . O 9 HOH M 67 567 178 HOH HOH . O 9 HOH M 68 568 179 HOH HOH . O 9 HOH M 69 569 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 UQ1 . . . G 6 -2.254 29.3 -40.603 0.71 31.66 ? C1 UQ1 304 L 1 HETATM 2 O O1 UQ1 . . . G 6 -2.766 29.868 -39.649 0.87 31.86 ? O1 UQ1 304 L 1 HETATM 3 C C2 UQ1 . . . G 6 -2.671 29.454 -41.929 0.93 29.27 ? C2 UQ1 304 L 1 HETATM 4 O O2 UQ1 . . . G 6 -3.715 30.273 -42.27 0.2 27.24 ? O2 UQ1 304 L 1 HETATM 5 C CM2 UQ1 . . . G 6 -4.014 31.374 -41.518 0.99 27.22 ? CM2 UQ1 304 L 1 HETATM 6 C C3 UQ1 . . . G 6 -2.021 28.76 -42.953 1 29.61 ? C3 UQ1 304 L 1 HETATM 7 O O3 UQ1 . . . G 6 -2.402 28.881 -44.277 0.78 32.65 ? O3 UQ1 304 L 1 HETATM 8 C CM3 UQ1 . . . G 6 -1.686 29.654 -45.177 1 28.35 ? CM3 UQ1 304 L 1 HETATM 9 C C4 UQ1 . . . G 6 -0.975 27.916 -42.643 0.49 28.97 ? C4 UQ1 304 L 1 HETATM 10 O O4 UQ1 . . . G 6 -0.442 27.325 -43.561 0.59 29.58 ? O4 UQ1 304 L 1 HETATM 11 C C5 UQ1 . . . G 6 -0.561 27.756 -41.32 0.59 29.96 ? C5 UQ1 304 L 1 HETATM 12 C CM5 UQ1 . . . G 6 0.568 26.843 -40.982 1 29.56 ? CM5 UQ1 304 L 1 HETATM 13 C C6 UQ1 . . . G 6 -1.216 28.445 -40.303 0.13 29.96 ? C6 UQ1 304 L 1 HETATM 14 C C7 UQ1 . . . G 6 -0.805 28.337 -38.871 0.81 30.05 ? C7 UQ1 304 L 1 HETATM 15 C C8 UQ1 . . . G 6 -1.67 27.793 -37.788 1 31.06 ? C8 UQ1 304 L 1 HETATM 16 C C9 UQ1 . . . G 6 -1.262 26.656 -37.141 0.55 31.09 ? C9 UQ1 304 L 1 HETATM 17 C C10 UQ1 . . . G 6 -0.446 25.633 -37.854 0.86 34.99 ? C10 UQ1 304 L 1 HETATM 18 C C11 UQ1 . . . G 6 -1.433 26.524 -35.671 1 30.77 ? C11 UQ1 304 L 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 18 #