data_4TRC
#
_model_server_result.job_id            YWm1MtpDYI1I7VRAgXpVqw 
_model_server_result.datetime_utc      '2024-10-19 08:23:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4trc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    4TRC 
#
_exptl.entry_id    4TRC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              135.127 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ADENINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4TRC 
_cell.length_a            137.2 
_cell.length_b            137.2 
_cell.length_c            53.8 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TRC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
_chem_comp.formula           'C5 H5 N5' 
_chem_comp.formula_weight    135.127 
_chem_comp.id                ADE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ADENINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 ADE sing 1 n y 
N9 C4 ADE sing 2 n y 
N9 HN9 ADE sing 3 n n 
C8 N7 ADE doub 4 n y 
C8 H8 ADE sing 5 n n 
N7 C5 ADE sing 6 n y 
C5 C6 ADE sing 7 n y 
C5 C4 ADE doub 8 n y 
C6 N6 ADE sing 9 n n 
C6 N1 ADE doub 10 n y 
N6 HN61 ADE sing 11 n n 
N6 HN62 ADE sing 12 n n 
N1 C2 ADE sing 13 n y 
C2 N3 ADE doub 14 n y 
C2 H2 ADE sing 15 n n 
N3 C4 ADE sing 16 n y 
#
_atom_sites.entry_id                     4TRC 
_atom_sites.fract_transf_matrix[1][1]    0.007289 
_atom_sites.fract_transf_matrix[1][2]    0.004208 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008416 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018587 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADE A 1 301 301 ADE ADE . 
D 3 PO4 A 1 302 302 PO4 PO4 . 
E 3 PO4 A 1 303 303 PO4 PO4 . 
F 2 ADE B 1 301 301 ADE ADE . 
G 3 PO4 B 1 302 302 PO4 PO4 . 
H 3 PO4 B 1 303 303 PO4 PO4 . 
I 3 PO4 B 1 304 304 PO4 PO4 . 
J 4 HOH A 1 401 551 HOH HOH . 
J 4 HOH A 2 402 442 HOH HOH . 
J 4 HOH A 3 403 481 HOH HOH . 
J 4 HOH A 4 404 461 HOH HOH . 
J 4 HOH A 5 405 480 HOH HOH . 
J 4 HOH A 6 406 425 HOH HOH . 
J 4 HOH A 7 407 530 HOH HOH . 
J 4 HOH A 8 408 460 HOH HOH . 
J 4 HOH A 9 409 479 HOH HOH . 
J 4 HOH A 10 410 525 HOH HOH . 
J 4 HOH A 11 411 415 HOH HOH . 
J 4 HOH A 12 412 462 HOH HOH . 
J 4 HOH A 13 413 502 HOH HOH . 
J 4 HOH A 14 414 498 HOH HOH . 
J 4 HOH A 15 415 544 HOH HOH . 
J 4 HOH A 16 416 417 HOH HOH . 
J 4 HOH A 17 417 488 HOH HOH . 
J 4 HOH A 18 418 496 HOH HOH . 
J 4 HOH A 19 419 489 HOH HOH . 
J 4 HOH A 20 420 439 HOH HOH . 
J 4 HOH A 21 421 401 HOH HOH . 
J 4 HOH A 22 422 402 HOH HOH . 
J 4 HOH A 23 423 403 HOH HOH . 
J 4 HOH A 24 424 405 HOH HOH . 
J 4 HOH A 25 425 409 HOH HOH . 
J 4 HOH A 26 426 411 HOH HOH . 
J 4 HOH A 27 427 412 HOH HOH . 
J 4 HOH A 28 428 413 HOH HOH . 
J 4 HOH A 29 429 419 HOH HOH . 
J 4 HOH A 30 430 420 HOH HOH . 
J 4 HOH A 31 431 421 HOH HOH . 
J 4 HOH A 32 432 423 HOH HOH . 
J 4 HOH A 33 433 427 HOH HOH . 
J 4 HOH A 34 434 429 HOH HOH . 
J 4 HOH A 35 435 431 HOH HOH . 
J 4 HOH A 36 436 433 HOH HOH . 
J 4 HOH A 37 437 435 HOH HOH . 
J 4 HOH A 38 438 437 HOH HOH . 
J 4 HOH A 39 439 441 HOH HOH . 
J 4 HOH A 40 440 444 HOH HOH . 
J 4 HOH A 41 441 445 HOH HOH . 
J 4 HOH A 42 442 446 HOH HOH . 
J 4 HOH A 43 443 447 HOH HOH . 
J 4 HOH A 44 444 448 HOH HOH . 
J 4 HOH A 45 445 451 HOH HOH . 
J 4 HOH A 46 446 453 HOH HOH . 
J 4 HOH A 47 447 458 HOH HOH . 
J 4 HOH A 48 448 464 HOH HOH . 
J 4 HOH A 49 449 465 HOH HOH . 
J 4 HOH A 50 450 466 HOH HOH . 
J 4 HOH A 51 451 467 HOH HOH . 
J 4 HOH A 52 452 471 HOH HOH . 
J 4 HOH A 53 453 473 HOH HOH . 
J 4 HOH A 54 454 474 HOH HOH . 
J 4 HOH A 55 455 475 HOH HOH . 
J 4 HOH A 56 456 478 HOH HOH . 
J 4 HOH A 57 457 483 HOH HOH . 
J 4 HOH A 58 458 484 HOH HOH . 
J 4 HOH A 59 459 486 HOH HOH . 
J 4 HOH A 60 460 487 HOH HOH . 
J 4 HOH A 61 461 491 HOH HOH . 
J 4 HOH A 62 462 495 HOH HOH . 
J 4 HOH A 63 463 499 HOH HOH . 
J 4 HOH A 64 464 500 HOH HOH . 
J 4 HOH A 65 465 501 HOH HOH . 
J 4 HOH A 66 466 503 HOH HOH . 
J 4 HOH A 67 467 504 HOH HOH . 
J 4 HOH A 68 468 507 HOH HOH . 
J 4 HOH A 69 469 508 HOH HOH . 
J 4 HOH A 70 470 509 HOH HOH . 
J 4 HOH A 71 471 510 HOH HOH . 
J 4 HOH A 72 472 511 HOH HOH . 
J 4 HOH A 73 473 512 HOH HOH . 
J 4 HOH A 74 474 514 HOH HOH . 
J 4 HOH A 75 475 516 HOH HOH . 
J 4 HOH A 76 476 518 HOH HOH . 
J 4 HOH A 77 477 521 HOH HOH . 
J 4 HOH A 78 478 522 HOH HOH . 
J 4 HOH A 79 479 523 HOH HOH . 
J 4 HOH A 80 480 524 HOH HOH . 
J 4 HOH A 81 481 526 HOH HOH . 
J 4 HOH A 82 482 527 HOH HOH . 
J 4 HOH A 83 483 528 HOH HOH . 
J 4 HOH A 84 484 529 HOH HOH . 
J 4 HOH A 85 485 531 HOH HOH . 
J 4 HOH A 86 486 533 HOH HOH . 
J 4 HOH A 87 487 536 HOH HOH . 
J 4 HOH A 88 488 537 HOH HOH . 
J 4 HOH A 89 489 538 HOH HOH . 
J 4 HOH A 90 490 539 HOH HOH . 
J 4 HOH A 91 491 546 HOH HOH . 
J 4 HOH A 92 492 547 HOH HOH . 
J 4 HOH A 93 493 550 HOH HOH . 
J 4 HOH A 94 494 552 HOH HOH . 
J 4 HOH A 95 495 555 HOH HOH . 
J 4 HOH A 96 496 557 HOH HOH . 
K 4 HOH B 1 401 470 HOH HOH . 
K 4 HOH B 2 402 449 HOH HOH . 
K 4 HOH B 3 403 482 HOH HOH . 
K 4 HOH B 4 404 408 HOH HOH . 
K 4 HOH B 5 405 556 HOH HOH . 
K 4 HOH B 6 406 407 HOH HOH . 
K 4 HOH B 7 407 477 HOH HOH . 
K 4 HOH B 8 408 469 HOH HOH . 
K 4 HOH B 9 409 485 HOH HOH . 
K 4 HOH B 10 410 450 HOH HOH . 
K 4 HOH B 11 411 428 HOH HOH . 
K 4 HOH B 12 412 430 HOH HOH . 
K 4 HOH B 13 413 515 HOH HOH . 
K 4 HOH B 14 414 553 HOH HOH . 
K 4 HOH B 15 415 517 HOH HOH . 
K 4 HOH B 16 416 534 HOH HOH . 
K 4 HOH B 17 417 404 HOH HOH . 
K 4 HOH B 18 418 406 HOH HOH . 
K 4 HOH B 19 419 410 HOH HOH . 
K 4 HOH B 20 420 414 HOH HOH . 
K 4 HOH B 21 421 416 HOH HOH . 
K 4 HOH B 22 422 418 HOH HOH . 
K 4 HOH B 23 423 422 HOH HOH . 
K 4 HOH B 24 424 424 HOH HOH . 
K 4 HOH B 25 425 426 HOH HOH . 
K 4 HOH B 26 426 432 HOH HOH . 
K 4 HOH B 27 427 434 HOH HOH . 
K 4 HOH B 28 428 436 HOH HOH . 
K 4 HOH B 29 429 438 HOH HOH . 
K 4 HOH B 30 430 440 HOH HOH . 
K 4 HOH B 31 431 443 HOH HOH . 
K 4 HOH B 32 432 452 HOH HOH . 
K 4 HOH B 33 433 454 HOH HOH . 
K 4 HOH B 34 434 455 HOH HOH . 
K 4 HOH B 35 435 456 HOH HOH . 
K 4 HOH B 36 436 457 HOH HOH . 
K 4 HOH B 37 437 459 HOH HOH . 
K 4 HOH B 38 438 463 HOH HOH . 
K 4 HOH B 39 439 468 HOH HOH . 
K 4 HOH B 40 440 472 HOH HOH . 
K 4 HOH B 41 441 476 HOH HOH . 
K 4 HOH B 42 442 490 HOH HOH . 
K 4 HOH B 43 443 492 HOH HOH . 
K 4 HOH B 44 444 493 HOH HOH . 
K 4 HOH B 45 445 494 HOH HOH . 
K 4 HOH B 46 446 497 HOH HOH . 
K 4 HOH B 47 447 505 HOH HOH . 
K 4 HOH B 48 448 506 HOH HOH . 
K 4 HOH B 49 449 513 HOH HOH . 
K 4 HOH B 50 450 519 HOH HOH . 
K 4 HOH B 51 451 520 HOH HOH . 
K 4 HOH B 52 452 532 HOH HOH . 
K 4 HOH B 53 453 535 HOH HOH . 
K 4 HOH B 54 454 540 HOH HOH . 
K 4 HOH B 55 455 541 HOH HOH . 
K 4 HOH B 56 456 542 HOH HOH . 
K 4 HOH B 57 457 543 HOH HOH . 
K 4 HOH B 58 458 545 HOH HOH . 
K 4 HOH B 59 459 548 HOH HOH . 
K 4 HOH B 60 460 549 HOH HOH . 
K 4 HOH B 61 461 554 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 ADE . . . F 2 18.912 49.487 5.016 1 42.7 ? N9 ADE 301 B 1 
HETATM 2 C C8 ADE . . . F 2 17.98 49.392 6.083 1 39.51 ? C8 ADE 301 B 1 
HETATM 3 N N7 ADE . . . F 2 18.23 50.392 6.936 1 43.13 ? N7 ADE 301 B 1 
HETATM 4 C C5 ADE . . . F 2 19.286 51.107 6.454 1 39.1 ? C5 ADE 301 B 1 
HETATM 5 C C6 ADE . . . F 2 19.951 52.236 6.944 1 33.45 ? C6 ADE 301 B 1 
HETATM 6 N N6 ADE . . . F 2 19.538 52.829 8.18 1 38.16 ? N6 ADE 301 B 1 
HETATM 7 N N1 ADE . . . F 2 20.994 52.759 6.244 1 40.43 ? N1 ADE 301 B 1 
HETATM 8 C C2 ADE . . . F 2 21.398 52.196 5.086 1 37.09 ? C2 ADE 301 B 1 
HETATM 9 N N3 ADE . . . F 2 20.702 51.028 4.579 1 32.86 ? N3 ADE 301 B 1 
HETATM 10 C C4 ADE . . . F 2 19.694 50.522 5.249 1 41.6 ? C4 ADE 301 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#