data_4TSO # _model_server_result.job_id Y5HnbpjH3fm9MZ95u8KrsA _model_server_result.datetime_utc '2025-06-20 10:05:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tso # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4TSO # _exptl.entry_id 4TSO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.515 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dihexanoyl-sn-glycero-3-phosphocholine _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TSO _cell.length_a 131.059 _cell.length_b 131.059 _cell.length_c 49.45 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TSO _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,Q 1 1 B,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 J N N ? 2 K N N # _chem_comp.formula 'C20 H41 N O8 P 1' _chem_comp.formula_weight 454.515 _chem_comp.id HXG _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-dihexanoyl-sn-glycero-3-phosphocholine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(4R,7R)-7-(hexanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphapentadecan-1-aminium 4-oxide' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF CAZ HXG doub 139 n n CAN CAL HXG sing 140 n n CAN CAQ HXG sing 141 n n CAZ OAV HXG sing 142 n n CAZ CAQ HXG sing 143 n n CAL CAJ HXG sing 144 n n CAS CAP HXG sing 145 n n CAS NBC HXG sing 146 n n CAC NBC HXG sing 147 n n CAA CAJ HXG sing 148 n n OAV CAT HXG sing 149 n n CAP OAW HXG sing 150 n n NBC CAD HXG sing 151 n n NBC CAE HXG sing 152 n n OAW PBD HXG sing 153 n n CAT CBB HXG sing 154 n n OAX PBD HXG sing 155 n n OAX CAU HXG sing 156 n n CBB CAU HXG sing 157 n n CBB OAY HXG sing 158 n n PBD OAI HXG doub 159 n n PBD OAH HXG sing 160 n n OAY CBA HXG sing 161 n n CBA OAG HXG doub 162 n n CBA CAR HXG sing 163 n n CAR CAO HXG sing 164 n n CAM CAO HXG sing 165 n n CAM CAK HXG sing 166 n n CAB CAK HXG sing 167 n n CAA H1 HXG sing 168 n n CAA H2 HXG sing 169 n n CAA H3 HXG sing 170 n n CAJ H4 HXG sing 171 n n CAJ H5 HXG sing 172 n n CAL H6 HXG sing 173 n n CAL H7 HXG sing 174 n n CAN H8 HXG sing 175 n n CAN H9 HXG sing 176 n n CAQ H10 HXG sing 177 n n CAQ H11 HXG sing 178 n n CAT H12 HXG sing 179 n n CAT H13 HXG sing 180 n n CBB H14 HXG sing 181 n n CAR H15 HXG sing 182 n n CAR H16 HXG sing 183 n n CAO H17 HXG sing 184 n n CAO H18 HXG sing 185 n n CAM H19 HXG sing 186 n n CAM H20 HXG sing 187 n n CAK H21 HXG sing 188 n n CAK H22 HXG sing 189 n n CAB H23 HXG sing 190 n n CAB H24 HXG sing 191 n n CAB H25 HXG sing 192 n n CAU H26 HXG sing 193 n n CAU H27 HXG sing 194 n n OAH H28 HXG sing 195 n n CAP H29 HXG sing 196 n n CAP H30 HXG sing 197 n n CAS H31 HXG sing 198 n n CAS H32 HXG sing 199 n n CAD H33 HXG sing 200 n n CAD H34 HXG sing 201 n n CAD H35 HXG sing 202 n n CAE H36 HXG sing 203 n n CAE H37 HXG sing 204 n n CAE H38 HXG sing 205 n n CAC H39 HXG sing 206 n n CAC H40 HXG sing 207 n n CAC H41 HXG sing 208 n n # _atom_sites.entry_id 4TSO _atom_sites.fract_transf_matrix[1][1] 0.00763 _atom_sites.fract_transf_matrix[1][2] 0.004405 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HXG A 1 201 201 HXG DRG . D 2 HXG A 1 202 202 HXG DRG . E 2 HXG A 1 203 203 HXG DRG . F 3 SO4 A 1 204 211 SO4 SO4 . G 4 PO4 A 1 205 212 PO4 PO4 . H 4 PO4 A 1 206 213 PO4 PO4 . I 4 PO4 A 1 207 214 PO4 PO4 . J 2 HXG B 1 201 201 HXG DRG . K 2 HXG B 1 202 202 HXG DRG . L 3 SO4 B 1 203 211 SO4 SO4 . M 3 SO4 B 1 204 212 SO4 SO4 . N 4 PO4 B 1 205 213 PO4 PO4 . O 4 PO4 B 1 206 214 PO4 PO4 . P 4 PO4 B 1 207 215 PO4 PO4 . Q 5 HOH A 1 301 22 HOH HOH . Q 5 HOH A 2 302 92 HOH HOH . Q 5 HOH A 3 303 7 HOH HOH . Q 5 HOH A 4 304 34 HOH HOH . Q 5 HOH A 5 305 83 HOH HOH . Q 5 HOH A 6 306 23 HOH HOH . Q 5 HOH A 7 307 79 HOH HOH . Q 5 HOH A 8 308 1 HOH HOH . Q 5 HOH A 9 309 2 HOH HOH . Q 5 HOH A 10 310 8 HOH HOH . Q 5 HOH A 11 311 14 HOH HOH . Q 5 HOH A 12 312 17 HOH HOH . Q 5 HOH A 13 313 19 HOH HOH . Q 5 HOH A 14 314 20 HOH HOH . Q 5 HOH A 15 315 21 HOH HOH . Q 5 HOH A 16 316 25 HOH HOH . Q 5 HOH A 17 317 26 HOH HOH . Q 5 HOH A 18 318 27 HOH HOH . Q 5 HOH A 19 319 28 HOH HOH . Q 5 HOH A 20 320 29 HOH HOH . Q 5 HOH A 21 321 30 HOH HOH . Q 5 HOH A 22 322 36 HOH HOH . Q 5 HOH A 23 323 37 HOH HOH . Q 5 HOH A 24 324 38 HOH HOH . Q 5 HOH A 25 325 39 HOH HOH . Q 5 HOH A 26 326 40 HOH HOH . Q 5 HOH A 27 327 41 HOH HOH . Q 5 HOH A 28 328 65 HOH HOH . Q 5 HOH A 29 329 66 HOH HOH . Q 5 HOH A 30 330 67 HOH HOH . Q 5 HOH A 31 331 77 HOH HOH . Q 5 HOH A 32 332 81 HOH HOH . Q 5 HOH A 33 333 82 HOH HOH . Q 5 HOH A 34 334 87 HOH HOH . Q 5 HOH A 35 335 88 HOH HOH . Q 5 HOH A 36 336 89 HOH HOH . Q 5 HOH A 37 337 99 HOH HOH . Q 5 HOH A 38 338 102 HOH HOH . Q 5 HOH A 39 339 103 HOH HOH . Q 5 HOH A 40 340 104 HOH HOH . Q 5 HOH A 41 341 105 HOH HOH . Q 5 HOH A 42 342 106 HOH HOH . Q 5 HOH A 43 343 107 HOH HOH . Q 5 HOH A 44 344 108 HOH HOH . Q 5 HOH A 45 345 109 HOH HOH . Q 5 HOH A 46 346 112 HOH HOH . Q 5 HOH A 47 347 114 HOH HOH . Q 5 HOH A 48 348 115 HOH HOH . R 5 HOH B 1 301 60 HOH HOH . R 5 HOH B 2 302 61 HOH HOH . R 5 HOH B 3 303 11 HOH HOH . R 5 HOH B 4 304 35 HOH HOH . R 5 HOH B 5 305 100 HOH HOH . R 5 HOH B 6 306 47 HOH HOH . R 5 HOH B 7 307 110 HOH HOH . R 5 HOH B 8 308 31 HOH HOH . R 5 HOH B 9 309 49 HOH HOH . R 5 HOH B 10 310 80 HOH HOH . R 5 HOH B 11 311 13 HOH HOH . R 5 HOH B 12 312 90 HOH HOH . R 5 HOH B 13 313 91 HOH HOH . R 5 HOH B 14 314 68 HOH HOH . R 5 HOH B 15 315 33 HOH HOH . R 5 HOH B 16 316 116 HOH HOH . R 5 HOH B 17 317 113 HOH HOH . R 5 HOH B 18 318 95 HOH HOH . R 5 HOH B 19 319 32 HOH HOH . R 5 HOH B 20 320 55 HOH HOH . R 5 HOH B 21 321 94 HOH HOH . R 5 HOH B 22 322 76 HOH HOH . R 5 HOH B 23 323 73 HOH HOH . R 5 HOH B 24 324 3 HOH HOH . R 5 HOH B 25 325 4 HOH HOH . R 5 HOH B 26 326 5 HOH HOH . R 5 HOH B 27 327 6 HOH HOH . R 5 HOH B 28 328 9 HOH HOH . R 5 HOH B 29 329 10 HOH HOH . R 5 HOH B 30 330 12 HOH HOH . R 5 HOH B 31 331 15 HOH HOH . R 5 HOH B 32 332 16 HOH HOH . R 5 HOH B 33 333 18 HOH HOH . R 5 HOH B 34 334 24 HOH HOH . R 5 HOH B 35 335 42 HOH HOH . R 5 HOH B 36 336 43 HOH HOH . R 5 HOH B 37 337 44 HOH HOH . R 5 HOH B 38 338 45 HOH HOH . R 5 HOH B 39 339 46 HOH HOH . R 5 HOH B 40 340 48 HOH HOH . R 5 HOH B 41 341 50 HOH HOH . R 5 HOH B 42 342 51 HOH HOH . R 5 HOH B 43 343 52 HOH HOH . R 5 HOH B 44 344 53 HOH HOH . R 5 HOH B 45 345 54 HOH HOH . R 5 HOH B 46 346 56 HOH HOH . R 5 HOH B 47 347 57 HOH HOH . R 5 HOH B 48 348 58 HOH HOH . R 5 HOH B 49 349 59 HOH HOH . R 5 HOH B 50 350 62 HOH HOH . R 5 HOH B 51 351 63 HOH HOH . R 5 HOH B 52 352 64 HOH HOH . R 5 HOH B 53 353 69 HOH HOH . R 5 HOH B 54 354 70 HOH HOH . R 5 HOH B 55 355 71 HOH HOH . R 5 HOH B 56 356 72 HOH HOH . R 5 HOH B 57 357 74 HOH HOH . R 5 HOH B 58 358 75 HOH HOH . R 5 HOH B 59 359 78 HOH HOH . R 5 HOH B 60 360 84 HOH HOH . R 5 HOH B 61 361 85 HOH HOH . R 5 HOH B 62 362 86 HOH HOH . R 5 HOH B 63 363 93 HOH HOH . R 5 HOH B 64 364 96 HOH HOH . R 5 HOH B 65 365 97 HOH HOH . R 5 HOH B 66 366 98 HOH HOH . R 5 HOH B 67 367 101 HOH HOH . R 5 HOH B 68 368 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA HXG . . . D 2 -83.463 81.287 63.839 1 79.92 ? CAA HXG 202 A 1 HETATM 2 C CAJ HXG . . . D 2 -82.457 80.386 63.108 1 75.9 ? CAJ HXG 202 A 1 HETATM 3 C CAL HXG . . . D 2 -83.143 79.065 62.726 1 72.91 ? CAL HXG 202 A 1 HETATM 4 C CAN HXG . . . D 2 -82.268 78.271 61.738 1 67.79 ? CAN HXG 202 A 1 HETATM 5 C CAQ HXG . . . D 2 -82.545 76.759 61.84 1 64.49 ? CAQ HXG 202 A 1 HETATM 6 C CAZ HXG . . . D 2 -81.811 76.108 63.025 1 62.89 ? CAZ HXG 202 A 1 HETATM 7 O OAF HXG . . . D 2 -81.845 74.885 63.2 1 58.01 ? OAF HXG 202 A 1 HETATM 8 O OAV HXG . . . D 2 -81.166 76.978 63.849 1 61.75 ? OAV HXG 202 A 1 HETATM 9 C CAT HXG . . . D 2 -79.776 76.659 63.948 1 61.99 ? CAT HXG 202 A 1 HETATM 10 C CBB HXG . . . D 2 -79.486 76.082 65.349 1 62.61 ? CBB HXG 202 A 1 HETATM 11 O OAY HXG . . . D 2 -80.738 75.778 66 1 68.42 ? OAY HXG 202 A 1 HETATM 12 C CBA HXG . . . D 2 -80.622 75.944 67.344 1 75.86 ? CBA HXG 202 A 1 HETATM 13 O OAG HXG . . . D 2 -80.233 75.064 68.11 1 80.08 ? OAG HXG 202 A 1 HETATM 14 C CAR HXG . . . D 2 -80.968 77.328 67.846 1 80.76 ? CAR HXG 202 A 1 HETATM 15 C CAO HXG . . . D 2 -82.005 77.169 68.939 1 85.09 ? CAO HXG 202 A 1 HETATM 16 C CAM HXG . . . D 2 -83.076 76.237 68.378 1 84.8 ? CAM HXG 202 A 1 HETATM 17 C CAK HXG . . . D 2 -84.35 76.276 69.223 1 89.48 ? CAK HXG 202 A 1 HETATM 18 C CAB HXG . . . D 2 -83.989 76.314 70.722 1 92.33 ? CAB HXG 202 A 1 HETATM 19 C CAU HXG . . . D 2 -78.609 74.841 65.317 1 57.17 ? CAU HXG 202 A 1 HETATM 20 O OAX HXG . . . D 2 -78.395 74.481 63.939 1 49.39 ? OAX HXG 202 A 1 HETATM 21 P PBD HXG . . . D 2 -76.941 74.392 63.276 1 42.74 ? PBD HXG 202 A 1 HETATM 22 O OAI HXG . . . D 2 -77.225 73.637 61.903 1 40.7 ? OAI HXG 202 A 1 HETATM 23 O OAH HXG . . . D 2 -75.994 73.664 64.138 1 43.66 ? OAH HXG 202 A 1 HETATM 24 O OAW HXG . . . D 2 -76.523 75.897 62.943 1 46.31 ? OAW HXG 202 A 1 HETATM 25 C CAP HXG . . . D 2 -76.841 76.497 61.701 1 46.24 ? CAP HXG 202 A 1 HETATM 26 C CAS HXG . . . D 2 -75.621 76.215 60.85 1 43.91 ? CAS HXG 202 A 1 HETATM 27 N NBC HXG . . . D 2 -74.715 77.397 60.762 1 44.9 ? NBC HXG 202 A 1 HETATM 28 C CAD HXG . . . D 2 -73.535 76.998 59.983 1 43.18 ? CAD HXG 202 A 1 HETATM 29 C CAE HXG . . . D 2 -74.29 77.773 62.129 1 47.39 ? CAE HXG 202 A 1 HETATM 30 C CAC HXG . . . D 2 -75.232 78.613 60.119 1 45.93 ? CAC HXG 202 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 61 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #