data_4TSP # _model_server_result.job_id CwT5bfUr8EctTGTYYOeAhg _model_server_result.datetime_utc '2025-02-17 10:03:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tsp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":210}' # _entry.id 4TSP # _exptl.entry_id 4TSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.151 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TSP _cell.length_a 129.55 _cell.length_b 129.55 _cell.length_c 49.17 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,R 1 1 B,H,I,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id Q _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H15 N O4 P 1' _chem_comp.formula_weight 184.151 _chem_comp.id PC _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 PC doub 294 n n P1 O3 PC sing 295 n n P1 O4 PC sing 296 n n P1 O2 PC sing 297 n n O3 HO3 PC sing 298 n n O4 HO4 PC sing 299 n n O2 C1 PC sing 300 n n C1 C2 PC sing 301 n n C1 H11 PC sing 302 n n C1 H12 PC sing 303 n n C2 N1 PC sing 304 n n C2 H21 PC sing 305 n n C2 H22 PC sing 306 n n N1 C3 PC sing 307 n n N1 C4 PC sing 308 n n N1 C5 PC sing 309 n n C3 H31 PC sing 310 n n C3 H32 PC sing 311 n n C3 H33 PC sing 312 n n C4 H41 PC sing 313 n n C4 H42 PC sing 314 n n C4 H43 PC sing 315 n n C5 H51 PC sing 316 n n C5 H52 PC sing 317 n n C5 H53 PC sing 318 n n # _atom_sites.entry_id 4TSP _atom_sites.fract_transf_matrix[1][1] 0.007719 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020338 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HXG A 1 201 201 HXG DRG . D 2 HXG A 1 202 202 HXG DRG . E 3 SO4 A 1 203 213 SO4 SO4 . F 4 PO4 A 1 204 214 PO4 PO4 . G 4 PO4 A 1 205 216 PO4 PO4 . H 3 SO4 B 1 201 211 SO4 SO4 . I 2 HXG B 1 202 201 HXG DRG . J 2 HXG B 1 203 202 HXG DRG . K 3 SO4 B 1 204 212 SO4 SO4 . L 4 PO4 B 1 205 213 PO4 PO4 . M 4 PO4 B 1 206 214 PO4 PO4 . N 4 PO4 B 1 207 216 PO4 PO4 . O 4 PO4 B 1 208 218 PO4 PO4 . P 4 PO4 B 1 209 219 PO4 PO4 . Q 5 PC B 1 210 220 PC PC . R 6 HOH A 1 301 29 HOH HOH . R 6 HOH A 2 302 115 HOH HOH . R 6 HOH A 3 303 14 HOH HOH . R 6 HOH A 4 304 94 HOH HOH . R 6 HOH A 5 305 8 HOH HOH . R 6 HOH A 6 306 92 HOH HOH . R 6 HOH A 7 307 79 HOH HOH . R 6 HOH A 8 308 18 HOH HOH . R 6 HOH A 9 309 52 HOH HOH . R 6 HOH A 10 310 97 HOH HOH . R 6 HOH A 11 311 51 HOH HOH . R 6 HOH A 12 312 2 HOH HOH . R 6 HOH A 13 313 98 HOH HOH . R 6 HOH A 14 314 20 HOH HOH . R 6 HOH A 15 315 91 HOH HOH . R 6 HOH A 16 316 35 HOH HOH . R 6 HOH A 17 317 3 HOH HOH . R 6 HOH A 18 318 6 HOH HOH . R 6 HOH A 19 319 7 HOH HOH . R 6 HOH A 20 320 9 HOH HOH . R 6 HOH A 21 321 10 HOH HOH . R 6 HOH A 22 322 11 HOH HOH . R 6 HOH A 23 323 13 HOH HOH . R 6 HOH A 24 324 15 HOH HOH . R 6 HOH A 25 325 17 HOH HOH . R 6 HOH A 26 326 21 HOH HOH . R 6 HOH A 27 327 23 HOH HOH . R 6 HOH A 28 328 25 HOH HOH . R 6 HOH A 29 329 26 HOH HOH . R 6 HOH A 30 330 27 HOH HOH . R 6 HOH A 31 331 28 HOH HOH . R 6 HOH A 32 332 30 HOH HOH . R 6 HOH A 33 333 31 HOH HOH . R 6 HOH A 34 334 32 HOH HOH . R 6 HOH A 35 335 33 HOH HOH . R 6 HOH A 36 336 34 HOH HOH . R 6 HOH A 37 337 36 HOH HOH . R 6 HOH A 38 338 37 HOH HOH . R 6 HOH A 39 339 38 HOH HOH . R 6 HOH A 40 340 39 HOH HOH . R 6 HOH A 41 341 40 HOH HOH . R 6 HOH A 42 342 41 HOH HOH . R 6 HOH A 43 343 42 HOH HOH . R 6 HOH A 44 344 43 HOH HOH . R 6 HOH A 45 345 44 HOH HOH . R 6 HOH A 46 346 45 HOH HOH . R 6 HOH A 47 347 53 HOH HOH . R 6 HOH A 48 348 66 HOH HOH . R 6 HOH A 49 349 67 HOH HOH . R 6 HOH A 50 350 72 HOH HOH . R 6 HOH A 51 351 73 HOH HOH . R 6 HOH A 52 352 76 HOH HOH . R 6 HOH A 53 353 78 HOH HOH . R 6 HOH A 54 354 82 HOH HOH . R 6 HOH A 55 355 83 HOH HOH . R 6 HOH A 56 356 84 HOH HOH . R 6 HOH A 57 357 85 HOH HOH . R 6 HOH A 58 358 86 HOH HOH . R 6 HOH A 59 359 87 HOH HOH . R 6 HOH A 60 360 89 HOH HOH . R 6 HOH A 61 361 90 HOH HOH . R 6 HOH A 62 362 93 HOH HOH . R 6 HOH A 63 363 95 HOH HOH . R 6 HOH A 64 364 96 HOH HOH . R 6 HOH A 65 365 101 HOH HOH . R 6 HOH A 66 366 102 HOH HOH . R 6 HOH A 67 367 103 HOH HOH . R 6 HOH A 68 368 116 HOH HOH . S 6 HOH B 1 301 88 HOH HOH . S 6 HOH B 2 302 64 HOH HOH . S 6 HOH B 3 303 75 HOH HOH . S 6 HOH B 4 304 62 HOH HOH . S 6 HOH B 5 305 4 HOH HOH . S 6 HOH B 6 306 70 HOH HOH . S 6 HOH B 7 307 104 HOH HOH . S 6 HOH B 8 308 71 HOH HOH . S 6 HOH B 9 309 58 HOH HOH . S 6 HOH B 10 310 19 HOH HOH . S 6 HOH B 11 311 80 HOH HOH . S 6 HOH B 12 312 109 HOH HOH . S 6 HOH B 13 313 54 HOH HOH . S 6 HOH B 14 314 61 HOH HOH . S 6 HOH B 15 315 1 HOH HOH . S 6 HOH B 16 316 5 HOH HOH . S 6 HOH B 17 317 12 HOH HOH . S 6 HOH B 18 318 16 HOH HOH . S 6 HOH B 19 319 22 HOH HOH . S 6 HOH B 20 320 24 HOH HOH . S 6 HOH B 21 321 46 HOH HOH . S 6 HOH B 22 322 47 HOH HOH . S 6 HOH B 23 323 48 HOH HOH . S 6 HOH B 24 324 49 HOH HOH . S 6 HOH B 25 325 50 HOH HOH . S 6 HOH B 26 326 55 HOH HOH . S 6 HOH B 27 327 56 HOH HOH . S 6 HOH B 28 328 57 HOH HOH . S 6 HOH B 29 329 59 HOH HOH . S 6 HOH B 30 330 60 HOH HOH . S 6 HOH B 31 331 63 HOH HOH . S 6 HOH B 32 332 65 HOH HOH . S 6 HOH B 33 333 68 HOH HOH . S 6 HOH B 34 334 69 HOH HOH . S 6 HOH B 35 335 74 HOH HOH . S 6 HOH B 36 336 77 HOH HOH . S 6 HOH B 37 337 81 HOH HOH . S 6 HOH B 38 338 99 HOH HOH . S 6 HOH B 39 339 100 HOH HOH . S 6 HOH B 40 340 105 HOH HOH . S 6 HOH B 41 341 106 HOH HOH . S 6 HOH B 42 342 107 HOH HOH . S 6 HOH B 43 343 108 HOH HOH . S 6 HOH B 44 344 110 HOH HOH . S 6 HOH B 45 345 111 HOH HOH . S 6 HOH B 46 346 112 HOH HOH . S 6 HOH B 47 347 113 HOH HOH . S 6 HOH B 48 348 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 PC . . . Q 5 -10.187 -4.478 8.044 1 81.66 ? P1 PC 210 B 1 HETATM 2 O O1 PC . . . Q 5 -10.738 -3.104 7.798 1 79.81 ? O1 PC 210 B 1 HETATM 3 O O3 PC . . . Q 5 -9.215 -4.53 9.209 1 83.68 ? O3 PC 210 B 1 HETATM 4 O O4 PC . . . Q 5 -11.3 -5.502 8.005 1 76.98 ? O4 PC 210 B 1 HETATM 5 O O2 PC . . . Q 5 -9.327 -4.816 6.695 1 80.96 ? O2 PC 210 B 1 HETATM 6 C C1 PC . . . Q 5 -7.912 -4.613 6.493 1 84.22 ? C1 PC 210 B 1 HETATM 7 C C2 PC . . . Q 5 -7.407 -5.239 5.169 1 82.64 ? C2 PC 210 B 1 HETATM 8 N N1 PC . . . Q 5 -7.978 -4.688 3.896 1 79.14 ? N1 PC 210 B 1 HETATM 9 C C3 PC . . . Q 5 -7.318 -5.243 2.692 1 77.74 ? C3 PC 210 B 1 HETATM 10 C C4 PC . . . Q 5 -7.772 -3.222 3.874 1 80.32 ? C4 PC 210 B 1 HETATM 11 C C5 PC . . . Q 5 -9.395 -5.09 3.769 1 73.96 ? C5 PC 210 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #