data_4TSY
#
_model_server_result.job_id            qCf3dR03p8h0o0oSk6qCBg 
_model_server_result.datetime_utc      '2024-11-05 10:59:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tsy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":204}' 
#
_entry.id    4TSY 
#
_exptl.entry_id    4TSY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              451.558 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[(E,2S,3R)-2-(hexanoylamino)-3-oxidanyl-dec-4-enoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4TSY 
_cell.length_a            151.337 
_cell.length_b            199.879 
_cell.length_c            120.58 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TSY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_355 -x-2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -302.674 0 60.29 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Y N N 
? 2 DA N N 
? 2 EA N N 
? 2 FA N N 
#
_chem_comp.formula           'C21 H44 N2 O6 P 1' 
_chem_comp.formula_weight    451.558 
_chem_comp.id                HXJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[(E,2S,3R)-2-(hexanoylamino)-3-oxidanyl-dec-4-enoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAE NBC HXJ sing 164 n n 
CAC NBC HXJ sing 165 n n 
NBC CAD HXJ sing 166 n n 
NBC CAU HXJ sing 167 n n 
CAU CAS HXJ sing 168 n n 
OAH CBA HXJ sing 169 n n 
CAN CAJ HXJ sing 170 n n 
CAN CAQ HXJ sing 171 n n 
CAK CAJ HXJ doub 172 e n 
CAK CBA HXJ sing 173 n n 
CAO CAQ HXJ sing 174 n n 
CAO CAL HXJ sing 175 n n 
CAS OAX HXJ sing 176 n n 
CBA CBB HXJ sing 177 n n 
CAL CAA HXJ sing 178 n n 
OAX PBD HXJ sing 179 n n 
CBB CAV HXJ sing 180 n n 
CBB NAW HXJ sing 181 n n 
OAY CAV HXJ sing 182 n n 
OAY PBD HXJ sing 183 n n 
PBD OAG HXJ doub 184 n n 
PBD OAI HXJ sing 185 n n 
NAW CAZ HXJ sing 186 n n 
CAZ OAF HXJ doub 187 n n 
CAZ CAT HXJ sing 188 n n 
CAR CAT HXJ sing 189 n n 
CAR CAP HXJ sing 190 n n 
CAM CAB HXJ sing 191 n n 
CAM CAP HXJ sing 192 n n 
CAA H1 HXJ sing 193 n n 
CAA H2 HXJ sing 194 n n 
CAA H3 HXJ sing 195 n n 
CAL H4 HXJ sing 196 n n 
CAL H5 HXJ sing 197 n n 
CAO H6 HXJ sing 198 n n 
CAO H7 HXJ sing 199 n n 
CAQ H8 HXJ sing 200 n n 
CAQ H9 HXJ sing 201 n n 
CAN H10 HXJ sing 202 n n 
CAN H11 HXJ sing 203 n n 
CAJ H12 HXJ sing 204 n n 
CAK H13 HXJ sing 205 n n 
CBA H14 HXJ sing 206 n n 
OAH H15 HXJ sing 207 n n 
CBB H16 HXJ sing 208 n n 
NAW H17 HXJ sing 209 n n 
CAT H18 HXJ sing 210 n n 
CAT H19 HXJ sing 211 n n 
CAR H20 HXJ sing 212 n n 
CAR H21 HXJ sing 213 n n 
CAP H22 HXJ sing 214 n n 
CAP H23 HXJ sing 215 n n 
CAM H24 HXJ sing 216 n n 
CAM H25 HXJ sing 217 n n 
CAB H26 HXJ sing 218 n n 
CAB H27 HXJ sing 219 n n 
CAB H28 HXJ sing 220 n n 
CAV H29 HXJ sing 221 n n 
CAV H30 HXJ sing 222 n n 
OAI H31 HXJ sing 223 n n 
CAS H32 HXJ sing 224 n n 
CAS H33 HXJ sing 225 n n 
CAU H34 HXJ sing 226 n n 
CAU H35 HXJ sing 227 n n 
CAD H36 HXJ sing 228 n n 
CAD H37 HXJ sing 229 n n 
CAD H38 HXJ sing 230 n n 
CAE H39 HXJ sing 231 n n 
CAE H40 HXJ sing 232 n n 
CAE H41 HXJ sing 233 n n 
CAC H42 HXJ sing 234 n n 
CAC H43 HXJ sing 235 n n 
CAC H44 HXJ sing 236 n n 
#
_atom_sites.entry_id                     4TSY 
_atom_sites.fract_transf_matrix[1][1]    0.006608 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005003 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008293 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 HXJ A 1 201 201 HXJ DRG . 
F 2 HXJ A 1 202 202 HXJ DRG . 
G 3 SO4 A 1 203 205 SO4 SO4 . 
H 3 SO4 A 1 204 206 SO4 SO4 . 
I 3 SO4 A 1 205 207 SO4 SO4 . 
J 3 SO4 A 1 206 1 SO4 SO4 . 
K 3 SO4 A 1 207 2 SO4 SO4 . 
L 3 SO4 A 1 208 3 SO4 SO4 . 
M 4 HTO A 1 209 11 HTO HTO . 
N 2 HXJ B 1 201 203 HXJ DRG . 
O 2 HXJ B 1 202 201 HXJ DRG . 
P 2 HXJ B 1 203 202 HXJ DRG . 
Q 3 SO4 B 1 204 205 SO4 SO4 . 
R 3 SO4 B 1 205 206 SO4 SO4 . 
S 3 SO4 B 1 206 207 SO4 SO4 . 
T 3 SO4 B 1 207 208 SO4 SO4 . 
U 3 SO4 B 1 208 4 SO4 SO4 . 
V 2 HXJ C 1 201 203 HXJ DRG . 
W 2 HXJ C 1 202 201 HXJ DRG . 
X 2 HXJ C 1 203 202 HXJ DRG . 
Y 2 HXJ C 1 204 203 HXJ DRG . 
Z 3 SO4 C 1 205 205 SO4 SO4 . 
AA 3 SO4 C 1 206 206 SO4 SO4 . 
BA 3 SO4 C 1 207 207 SO4 SO4 . 
CA 3 SO4 C 1 208 208 SO4 SO4 . 
DA 2 HXJ D 1 201 201 HXJ DRG . 
EA 2 HXJ D 1 202 202 HXJ DRG . 
FA 2 HXJ D 1 203 203 HXJ DRG . 
GA 3 SO4 D 1 204 205 SO4 SO4 . 
HA 3 SO4 D 1 205 206 SO4 SO4 . 
IA 3 SO4 D 1 206 207 SO4 SO4 . 
JA 3 SO4 D 1 207 208 SO4 SO4 . 
KA 5 HOH A 1 301 6 HOH HOH . 
KA 5 HOH A 2 302 8 HOH HOH . 
LA 5 HOH B 1 301 1 HOH HOH . 
LA 5 HOH B 2 302 3 HOH HOH . 
LA 5 HOH B 3 303 13 HOH HOH . 
LA 5 HOH B 4 304 14 HOH HOH . 
MA 5 HOH C 1 301 4 HOH HOH . 
MA 5 HOH C 2 302 7 HOH HOH . 
MA 5 HOH C 3 303 10 HOH HOH . 
MA 5 HOH C 4 304 11 HOH HOH . 
MA 5 HOH C 5 305 12 HOH HOH . 
MA 5 HOH C 6 306 16 HOH HOH . 
MA 5 HOH C 7 307 17 HOH HOH . 
NA 5 HOH D 1 301 2 HOH HOH . 
NA 5 HOH D 2 302 5 HOH HOH . 
NA 5 HOH D 3 303 9 HOH HOH . 
NA 5 HOH D 4 304 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAL HXJ . . . Y 2 -127.04 12.383 26.322 1 71.49 ? CAL HXJ 204 C 1 
HETATM 2 C CAO HXJ . . . Y 2 -126.594 13.58 27.215 1 75.35 ? CAO HXJ 204 C 1 
HETATM 3 C CAQ HXJ . . . Y 2 -127.777 14.227 28 1 77.28 ? CAQ HXJ 204 C 1 
HETATM 4 C CAN HXJ . . . Y 2 -127.27 14.94 29.281 1 77.14 ? CAN HXJ 204 C 1 
HETATM 5 C CAJ HXJ . . . Y 2 -126.091 15.908 28.918 1 74.49 ? CAJ HXJ 204 C 1 
HETATM 6 C CAK HXJ . . . Y 2 -126.017 17.414 29.323 1 69.34 ? CAK HXJ 204 C 1 
HETATM 7 C CBA HXJ . . . Y 2 -124.764 18.268 28.872 1 65.66 ? CBA HXJ 204 C 1 
HETATM 8 O OAH HXJ . . . Y 2 -125.219 19.146 27.843 1 60.75 ? OAH HXJ 204 C 1 
HETATM 9 C CBB HXJ . . . Y 2 -124.061 19.116 30.019 1 65.73 ? CBB HXJ 204 C 1 
HETATM 10 N NAW HXJ . . . Y 2 -122.674 18.71 30.451 1 70.21 ? NAW HXJ 204 C 1 
HETATM 11 C CAZ HXJ . . . Y 2 -122.248 17.498 30.889 1 73.9 ? CAZ HXJ 204 C 1 
HETATM 12 O OAF HXJ . . . Y 2 -121.075 17.349 31.253 1 75.08 ? OAF HXJ 204 C 1 
HETATM 13 C CAT HXJ . . . Y 2 -123.251 16.32 30.774 1 75.26 ? CAT HXJ 204 C 1 
HETATM 14 C CAR HXJ . . . Y 2 -123.019 15.261 31.847 1 76.76 ? CAR HXJ 204 C 1 
HETATM 15 C CAP HXJ . . . Y 2 -123.736 14.012 31.309 1 77.21 ? CAP HXJ 204 C 1 
HETATM 16 C CAM HXJ . . . Y 2 -123.766 12.994 32.429 1 80.73 ? CAM HXJ 204 C 1 
HETATM 17 C CAB HXJ . . . Y 2 -124.602 11.794 31.929 1 80.03 ? CAB HXJ 204 C 1 
HETATM 18 C CAV HXJ . . . Y 2 -123.947 20.603 29.617 1 58.85 ? CAV HXJ 204 C 1 
HETATM 19 O OAY HXJ . . . Y 2 -123.429 21.273 30.787 1 53.05 ? OAY HXJ 204 C 1 
HETATM 20 P PBD HXJ . . . Y 2 -123.24 22.851 30.807 1 47.08 ? PBD HXJ 204 C 1 
HETATM 21 O OAI HXJ . . . Y 2 -123.917 23.246 32.196 1 50.95 ? OAI HXJ 204 C 1 
HETATM 22 O OAG HXJ . . . Y 2 -123.882 23.572 29.698 1 45.18 ? OAG HXJ 204 C 1 
HETATM 23 O OAX HXJ . . . Y 2 -121.72 23.169 30.972 1 49.08 ? OAX HXJ 204 C 1 
HETATM 24 C CAS HXJ . . . Y 2 -120.779 22.199 31.433 1 51.93 ? CAS HXJ 204 C 1 
HETATM 25 C CAU HXJ . . . Y 2 -119.494 22.492 30.665 1 51.29 ? CAU HXJ 204 C 1 
HETATM 26 N NBC HXJ . . . Y 2 -118.281 21.87 31.277 1 53.2 ? NBC HXJ 204 C 1 
HETATM 27 C CAD HXJ . . . Y 2 -117.176 22.14 30.334 1 52.65 ? CAD HXJ 204 C 1 
HETATM 28 C CAE HXJ . . . Y 2 -118.403 20.406 31.492 1 54.87 ? CAE HXJ 204 C 1 
HETATM 29 C CAC HXJ . . . Y 2 -117.899 22.481 32.564 1 55.74 ? CAC HXJ 204 C 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           29 
#