data_4TTB # _model_server_result.job_id RkdUA-Z6DqVt5EHWji7gZQ _model_server_result.datetime_utc '2024-11-23 07:21:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ttb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 4TTB # _exptl.entry_id 4TTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TTB _cell.length_a 72.892 _cell.length_b 72.892 _cell.length_c 95.515 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 4TTB _atom_sites.fract_transf_matrix[1][1] 0.013719 _atom_sites.fract_transf_matrix[1][2] 0.007921 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015841 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 301 301 FMN FMN . D 2 FMN B 1 301 301 FMN FMN . E 3 HOH A 1 401 41 HOH HOH . E 3 HOH A 2 402 3 HOH HOH . E 3 HOH A 3 403 6 HOH HOH . E 3 HOH A 4 404 7 HOH HOH . E 3 HOH A 5 405 8 HOH HOH . E 3 HOH A 6 406 9 HOH HOH . E 3 HOH A 7 407 10 HOH HOH . E 3 HOH A 8 408 13 HOH HOH . E 3 HOH A 9 409 14 HOH HOH . E 3 HOH A 10 410 16 HOH HOH . E 3 HOH A 11 411 17 HOH HOH . E 3 HOH A 12 412 23 HOH HOH . E 3 HOH A 13 413 26 HOH HOH . E 3 HOH A 14 414 28 HOH HOH . E 3 HOH A 15 415 30 HOH HOH . E 3 HOH A 16 416 31 HOH HOH . E 3 HOH A 17 417 32 HOH HOH . E 3 HOH A 18 418 33 HOH HOH . E 3 HOH A 19 419 34 HOH HOH . E 3 HOH A 20 420 35 HOH HOH . E 3 HOH A 21 421 38 HOH HOH . F 3 HOH B 1 401 2 HOH HOH . F 3 HOH B 2 402 42 HOH HOH . F 3 HOH B 3 403 1 HOH HOH . F 3 HOH B 4 404 4 HOH HOH . F 3 HOH B 5 405 5 HOH HOH . F 3 HOH B 6 406 11 HOH HOH . F 3 HOH B 7 407 12 HOH HOH . F 3 HOH B 8 408 15 HOH HOH . F 3 HOH B 9 409 18 HOH HOH . F 3 HOH B 10 410 19 HOH HOH . F 3 HOH B 11 411 20 HOH HOH . F 3 HOH B 12 412 21 HOH HOH . F 3 HOH B 13 413 22 HOH HOH . F 3 HOH B 14 414 24 HOH HOH . F 3 HOH B 15 415 25 HOH HOH . F 3 HOH B 16 416 27 HOH HOH . F 3 HOH B 17 417 29 HOH HOH . F 3 HOH B 18 418 36 HOH HOH . F 3 HOH B 19 419 37 HOH HOH . F 3 HOH B 20 420 39 HOH HOH . F 3 HOH B 21 421 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . D 2 -28.041 3.654 14.689 1 95.57 ? N1 FMN 301 B 1 HETATM 2 C C2 FMN . . . D 2 -29.108 3.706 15.555 1 91.92 ? C2 FMN 301 B 1 HETATM 3 O O2 FMN . . . D 2 -29.084 4.389 16.563 1 90.68 ? O2 FMN 301 B 1 HETATM 4 N N3 FMN . . . D 2 -30.201 2.953 15.227 1 91.22 ? N3 FMN 301 B 1 HETATM 5 C C4 FMN . . . D 2 -30.335 2.148 14.117 1 97.28 ? C4 FMN 301 B 1 HETATM 6 O O4 FMN . . . D 2 -31.373 1.531 13.953 1 98.54 ? O4 FMN 301 B 1 HETATM 7 C C4A FMN . . . D 2 -29.218 2.141 13.28 1 101.93 ? C4A FMN 301 B 1 HETATM 8 N N5 FMN . . . D 2 -29.269 1.387 12.181 1 106.1 ? N5 FMN 301 B 1 HETATM 9 C C5A FMN . . . D 2 -28.179 1.349 11.318 1 102.64 ? C5A FMN 301 B 1 HETATM 10 C C6 FMN . . . D 2 -28.237 0.55 10.157 1 100.73 ? C6 FMN 301 B 1 HETATM 11 C C7 FMN . . . D 2 -27.157 0.506 9.29 1 99.53 ? C7 FMN 301 B 1 HETATM 12 C C7M FMN . . . D 2 -27.272 -0.369 8.066 1 95.54 ? C7M FMN 301 B 1 HETATM 13 C C8 FMN . . . D 2 -25.989 1.251 9.551 1 97.04 ? C8 FMN 301 B 1 HETATM 14 C C8M FMN . . . D 2 -24.787 1.218 8.598 1 91.29 ? C8M FMN 301 B 1 HETATM 15 C C9 FMN . . . D 2 -25.922 2.041 10.69 1 94.97 ? C9 FMN 301 B 1 HETATM 16 C C9A FMN . . . D 2 -27.027 2.091 11.586 1 99.65 ? C9A FMN 301 B 1 HETATM 17 N N10 FMN . . . D 2 -27.008 2.876 12.76 1 97.05 ? N10 FMN 301 B 1 HETATM 18 C C10 FMN . . . D 2 -28.099 2.88 13.568 1 98.09 ? C10 FMN 301 B 1 HETATM 19 C C1' FMN . . . D 2 -25.821 3.693 13.106 1 84.92 ? C1' FMN 301 B 1 HETATM 20 C C2' FMN . . . D 2 -24.707 2.897 13.745 1 76.07 ? C2' FMN 301 B 1 HETATM 21 O O2' FMN . . . D 2 -25.073 2.494 15.048 1 74.6 ? O2' FMN 301 B 1 HETATM 22 C C3' FMN . . . D 2 -23.409 3.761 13.793 1 72.06 ? C3' FMN 301 B 1 HETATM 23 O O3' FMN . . . D 2 -23.064 4.168 12.5 1 81.6 ? O3' FMN 301 B 1 HETATM 24 C C4' FMN . . . D 2 -22.257 2.937 14.368 1 70.68 ? C4' FMN 301 B 1 HETATM 25 O O4' FMN . . . D 2 -22.516 2.647 15.72 1 63.56 ? O4' FMN 301 B 1 HETATM 26 C C5' FMN . . . D 2 -20.933 3.655 14.236 1 73.35 ? C5' FMN 301 B 1 HETATM 27 O O5' FMN . . . D 2 -21.005 4.941 14.866 1 70.45 ? O5' FMN 301 B 1 HETATM 28 P P FMN . . . D 2 -20.692 6.28 13.992 1 64.42 ? P FMN 301 B 1 HETATM 29 O O1P FMN . . . D 2 -20.889 7.477 14.899 1 74.32 ? O1P FMN 301 B 1 HETATM 30 O O2P FMN . . . D 2 -21.678 6.312 12.819 1 74.29 1 O2P FMN 301 B 1 HETATM 31 O O3P FMN . . . D 2 -19.238 6.251 13.475 1 53.21 ? O3P FMN 301 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #