data_4TTV # _model_server_result.job_id 8BXdxqnKYeTwosq9UO2jtQ _model_server_result.datetime_utc '2025-01-02 22:24:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ttv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":801}' # _entry.id 4TTV # _exptl.entry_id 4TTV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.633 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2R)-2-[(2S,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadec-6-en-2-yl]cyclobutanecarboxylic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.1 _cell.angle_gamma 90 _cell.entry_id 4TTV _cell.length_a 92.02 _cell.length_b 134.61 _cell.length_c 128.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TTV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B ND2 ASN 188 B ASN 497 1_555 B ND2 ASN 224 B ASN 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? covale ? covale2 C NE2 GLN 357 C GLN 666 1_555 C ND2 ASN 384 C ASN 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.482 ? covale ? covale3 D NE2 GLN 357 D GLN 666 1_555 D OD1 ASN 384 D ASN 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? metalc ? metalc1 A SG CYS 104 A CYS 413 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc2 A NE2 HIS 155 A HIS 464 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc3 A ND1 HIS 281 A HIS 590 1_555 F ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc4 B SG CYS 104 B CYS 413 1_555 H ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc5 B NE2 HIS 155 B HIS 464 1_555 H ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc6 B ND1 HIS 281 B HIS 590 1_555 H ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc7 C SG CYS 104 C CYS 413 1_555 J ZN ZN . C ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc8 C NE2 HIS 155 C HIS 464 1_555 J ZN ZN . C ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc9 C ND1 HIS 281 C HIS 590 1_555 J ZN ZN . C ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc10 D SG CYS 104 D CYS 413 1_555 L ZN ZN . D ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc11 D NE2 HIS 155 D HIS 464 1_555 L ZN ZN . D ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc12 D ND1 HIS 281 D HIS 590 1_555 L ZN ZN . D ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? # _chem_comp.formula 'C27 H43 N O6' _chem_comp.formula_weight 477.633 _chem_comp.id BC9 _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2R)-2-[(2S,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadec-6-en-2-yl]cyclobutanecarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 C13 BC9 sing 70 n n C15 C14 BC9 sing 71 n n C13 C14 BC9 sing 72 n n C13 C11 BC9 sing 73 n n C14 C16 BC9 sing 74 n n C11 C10 BC9 doub 75 e n C11 C12 BC9 sing 76 n n C16 C17 BC9 sing 77 n n C10 C9 BC9 sing 78 n n C12 N35 BC9 trip 79 n n O34 C25 BC9 sing 80 n n C21 C20 BC9 sing 81 n n C17 C18 BC9 sing 82 n n C17 C19 BC9 sing 83 n n C8 C9 BC9 sing 84 n n C8 C7 BC9 sing 85 n n C20 C19 BC9 sing 86 n n C20 C22 BC9 sing 87 n n C7 C6 BC9 sing 88 n n C25 C23 BC9 sing 89 n n C25 C26 BC9 sing 90 n n O28 C27 BC9 doub 91 n n C23 C22 BC9 sing 92 n n C23 C24 BC9 sing 93 n n C6 O29 BC9 sing 94 n n C6 C1 BC9 sing 95 n n C27 O29 BC9 sing 96 n n C27 C26 BC9 sing 97 n n C5 C1 BC9 sing 98 n n C5 C3 BC9 sing 99 n n C1 C2 BC9 sing 100 n n C3 C2 BC9 sing 101 n n C2 C30 BC9 sing 102 n n C30 O31 BC9 doub 103 n n C30 O32 BC9 sing 104 n n C1 H1 BC9 sing 105 n n C2 H2 BC9 sing 106 n n C3 H3 BC9 sing 107 n n C3 H4 BC9 sing 108 n n C5 H5 BC9 sing 109 n n C5 H6 BC9 sing 110 n n C6 H7 BC9 sing 111 n n C7 H8 BC9 sing 112 n n C7 H9 BC9 sing 113 n n C8 H10 BC9 sing 114 n n C8 H11 BC9 sing 115 n n C9 H12 BC9 sing 116 n n C9 H13 BC9 sing 117 n n C10 H14 BC9 sing 118 n n C13 H15 BC9 sing 119 n n C14 H16 BC9 sing 120 n n C15 H17 BC9 sing 121 n n C15 H18 BC9 sing 122 n n C15 H19 BC9 sing 123 n n C16 H20 BC9 sing 124 n n C16 H21 BC9 sing 125 n n C17 H22 BC9 sing 126 n n C18 H23 BC9 sing 127 n n C18 H24 BC9 sing 128 n n C18 H25 BC9 sing 129 n n C19 H26 BC9 sing 130 n n C19 H27 BC9 sing 131 n n C20 H28 BC9 sing 132 n n C21 H29 BC9 sing 133 n n C21 H30 BC9 sing 134 n n C21 H31 BC9 sing 135 n n C22 H32 BC9 sing 136 n n C22 H33 BC9 sing 137 n n C23 H34 BC9 sing 138 n n C24 H35 BC9 sing 139 n n C24 H36 BC9 sing 140 n n C24 H37 BC9 sing 141 n n C25 H38 BC9 sing 142 n n C26 H39 BC9 sing 143 n n C26 H40 BC9 sing 144 n n O32 H41 BC9 sing 145 n n O33 H42 BC9 sing 146 n n O34 H43 BC9 sing 147 n n # _atom_sites.entry_id 4TTV _atom_sites.fract_transf_matrix[1][1] 0.010867 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000019 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BC9 A 1 801 1 BC9 BC9 . F 3 ZN A 1 802 991 ZN ZN . G 2 BC9 B 1 801 1 BC9 BC9 . H 3 ZN B 1 802 991 ZN ZN . I 2 BC9 C 1 801 1 BC9 BC9 . J 3 ZN C 1 802 991 ZN ZN . K 2 BC9 D 1 801 1 BC9 BC9 . L 3 ZN D 1 802 991 ZN ZN . M 4 HOH A 1 901 1 HOH HOH . M 4 HOH A 2 902 3 HOH HOH . M 4 HOH A 3 903 5 HOH HOH . M 4 HOH A 4 904 6 HOH HOH . M 4 HOH A 5 905 9 HOH HOH . M 4 HOH A 6 906 10 HOH HOH . M 4 HOH A 7 907 11 HOH HOH . M 4 HOH A 8 908 12 HOH HOH . M 4 HOH A 9 909 13 HOH HOH . M 4 HOH A 10 910 14 HOH HOH . M 4 HOH A 11 911 15 HOH HOH . M 4 HOH A 12 912 16 HOH HOH . M 4 HOH A 13 913 17 HOH HOH . M 4 HOH A 14 914 18 HOH HOH . M 4 HOH A 15 915 19 HOH HOH . M 4 HOH A 16 916 20 HOH HOH . M 4 HOH A 17 917 53 HOH HOH . M 4 HOH A 18 918 54 HOH HOH . M 4 HOH A 19 919 58 HOH HOH . N 4 HOH B 1 901 59 HOH HOH . N 4 HOH B 2 902 2 HOH HOH . N 4 HOH B 3 903 4 HOH HOH . N 4 HOH B 4 904 7 HOH HOH . N 4 HOH B 5 905 8 HOH HOH . N 4 HOH B 6 906 21 HOH HOH . N 4 HOH B 7 907 22 HOH HOH . N 4 HOH B 8 908 23 HOH HOH . N 4 HOH B 9 909 24 HOH HOH . N 4 HOH B 10 910 25 HOH HOH . N 4 HOH B 11 911 26 HOH HOH . N 4 HOH B 12 912 27 HOH HOH . N 4 HOH B 13 913 28 HOH HOH . N 4 HOH B 14 914 29 HOH HOH . N 4 HOH B 15 915 30 HOH HOH . N 4 HOH B 16 916 55 HOH HOH . O 4 HOH C 1 901 31 HOH HOH . O 4 HOH C 2 902 32 HOH HOH . O 4 HOH C 3 903 33 HOH HOH . O 4 HOH C 4 904 34 HOH HOH . O 4 HOH C 5 905 38 HOH HOH . O 4 HOH C 6 906 39 HOH HOH . O 4 HOH C 7 907 40 HOH HOH . O 4 HOH C 8 908 42 HOH HOH . O 4 HOH C 9 909 44 HOH HOH . O 4 HOH C 10 910 45 HOH HOH . O 4 HOH C 11 911 46 HOH HOH . P 4 HOH D 1 901 35 HOH HOH . P 4 HOH D 2 902 36 HOH HOH . P 4 HOH D 3 903 37 HOH HOH . P 4 HOH D 4 904 41 HOH HOH . P 4 HOH D 5 905 43 HOH HOH . P 4 HOH D 6 906 47 HOH HOH . P 4 HOH D 7 907 48 HOH HOH . P 4 HOH D 8 908 49 HOH HOH . P 4 HOH D 9 909 50 HOH HOH . P 4 HOH D 10 910 51 HOH HOH . P 4 HOH D 11 911 52 HOH HOH . P 4 HOH D 12 912 56 HOH HOH . P 4 HOH D 13 913 60 HOH HOH . P 4 HOH D 14 914 61 HOH HOH . P 4 HOH D 15 915 62 HOH HOH . P 4 HOH D 16 916 63 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BC9 . . . I 2 11.802 -46.104 2.132 1 50.49 ? C1 BC9 801 C 1 HETATM 2 C C2 BC9 . . . I 2 10.662 -46.233 3.088 1 51.51 ? C2 BC9 801 C 1 HETATM 3 C C3 BC9 . . . I 2 10.856 -47.721 3.09 1 50.82 ? C3 BC9 801 C 1 HETATM 4 C C5 BC9 . . . I 2 11.949 -47.605 2.068 1 50.42 ? C5 BC9 801 C 1 HETATM 5 C C6 BC9 . . . I 2 11.504 -45.461 0.801 1 50.39 ? C6 BC9 801 C 1 HETATM 6 C C7 BC9 . . . I 2 12.751 -45.787 0.024 1 50.01 ? C7 BC9 801 C 1 HETATM 7 C C8 BC9 . . . I 2 13.418 -44.688 -0.712 1 50.3 ? C8 BC9 801 C 1 HETATM 8 C C9 BC9 . . . I 2 14.664 -44.306 -0.548 1 49.75 ? C9 BC9 801 C 1 HETATM 9 C C10 BC9 . . . I 2 14.832 -43.271 -1.514 1 51.28 ? C10 BC9 801 C 1 HETATM 10 C C11 BC9 . . . I 2 15.806 -42.461 -1.85 1 51.78 ? C11 BC9 801 C 1 HETATM 11 C C12 BC9 . . . I 2 16.915 -42.355 -1.3 1 51.1 ? C12 BC9 801 C 1 HETATM 12 C C13 BC9 . . . I 2 15.408 -41.62 -2.996 1 52.7 ? C13 BC9 801 C 1 HETATM 13 C C14 BC9 . . . I 2 15.222 -40.221 -2.526 1 52.23 ? C14 BC9 801 C 1 HETATM 14 C C15 BC9 . . . I 2 14.755 -39.432 -3.703 1 53.17 ? C15 BC9 801 C 1 HETATM 15 C C16 BC9 . . . I 2 14.194 -40.144 -1.438 1 51.59 ? C16 BC9 801 C 1 HETATM 16 C C17 BC9 . . . I 2 14.129 -38.727 -0.953 1 50.82 ? C17 BC9 801 C 1 HETATM 17 C C18 BC9 . . . I 2 15.467 -38.327 -0.404 1 49.37 ? C18 BC9 801 C 1 HETATM 18 C C19 BC9 . . . I 2 13.089 -38.649 0.129 1 50.48 ? C19 BC9 801 C 1 HETATM 19 C C20 BC9 . . . I 2 11.748 -39.096 -0.389 1 50.95 ? C20 BC9 801 C 1 HETATM 20 C C21 BC9 . . . I 2 11.051 -37.901 -0.976 1 51.5 ? C21 BC9 801 C 1 HETATM 21 C C22 BC9 . . . I 2 10.98 -39.625 0.795 1 50.49 ? C22 BC9 801 C 1 HETATM 22 C C23 BC9 . . . I 2 9.498 -39.797 0.585 1 51.07 ? C23 BC9 801 C 1 HETATM 23 C C24 BC9 . . . I 2 8.788 -39.306 1.812 1 50.27 ? C24 BC9 801 C 1 HETATM 24 C C25 BC9 . . . I 2 9.168 -41.248 0.342 1 51.68 ? C25 BC9 801 C 1 HETATM 25 C C26 BC9 . . . I 2 9.772 -42.136 1.404 1 50.36 ? C26 BC9 801 C 1 HETATM 26 C C27 BC9 . . . I 2 10.052 -43.519 0.923 1 50.35 ? C27 BC9 801 C 1 HETATM 27 O O28 BC9 . . . I 2 9.15 -44.168 0.519 1 51.14 ? O28 BC9 801 C 1 HETATM 28 O O29 BC9 . . . I 2 11.37 -44.068 0.941 1 49.65 ? O29 BC9 801 C 1 HETATM 29 C C30 BC9 . . . I 2 10.992 -45.655 4.412 1 52.12 ? C30 BC9 801 C 1 HETATM 30 O O31 BC9 . . . I 2 10.066 -45.31 5.146 1 52.7 ? O31 BC9 801 C 1 HETATM 31 O O32 BC9 . . . I 2 12.17 -45.528 4.748 1 51.78 ? O32 BC9 801 C 1 HETATM 32 O O33 BC9 . . . I 2 16.386 -41.661 -4.006 1 52.75 ? O33 BC9 801 C 1 HETATM 33 O O34 BC9 . . . I 2 9.719 -41.573 -0.922 1 52.53 ? O34 BC9 801 C 1 HETATM 34 N N35 BC9 . . . I 2 17.955 -42.226 -0.839 1 50.18 ? N35 BC9 801 C 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 34 #