data_4TU5
#
_model_server_result.job_id            mk89obu0eLtPDuwIJFxgHQ 
_model_server_result.datetime_utc      '2024-11-23 21:28:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tu5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    4TU5 
#
_exptl.entry_id    4TU5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4TU5 
_cell.length_a            79.529 
_cell.length_b            79.529 
_cell.length_c            109.581 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TU5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 277 n n 
PA O2A NDP sing 278 n n 
PA O5B NDP sing 279 n n 
PA O3 NDP sing 280 n n 
O2A HOA2 NDP sing 281 n n 
O5B C5B NDP sing 282 n n 
C5B C4B NDP sing 283 n n 
C5B H51A NDP sing 284 n n 
C5B H52A NDP sing 285 n n 
C4B O4B NDP sing 286 n n 
C4B C3B NDP sing 287 n n 
C4B H4B NDP sing 288 n n 
O4B C1B NDP sing 289 n n 
C3B O3B NDP sing 290 n n 
C3B C2B NDP sing 291 n n 
C3B H3B NDP sing 292 n n 
O3B HO3A NDP sing 293 n n 
C2B O2B NDP sing 294 n n 
C2B C1B NDP sing 295 n n 
C2B H2B NDP sing 296 n n 
O2B P2B NDP sing 297 n n 
C1B N9A NDP sing 298 n n 
C1B H1B NDP sing 299 n n 
N9A C8A NDP sing 300 n y 
N9A C4A NDP sing 301 n y 
C8A N7A NDP doub 302 n y 
C8A H8A NDP sing 303 n n 
N7A C5A NDP sing 304 n y 
C5A C6A NDP sing 305 n y 
C5A C4A NDP doub 306 n y 
C6A N6A NDP sing 307 n n 
C6A N1A NDP doub 308 n y 
N6A H61A NDP sing 309 n n 
N6A H62A NDP sing 310 n n 
N1A C2A NDP sing 311 n y 
C2A N3A NDP doub 312 n y 
C2A H2A NDP sing 313 n n 
N3A C4A NDP sing 314 n y 
O3 PN NDP sing 315 n n 
PN O1N NDP doub 316 n n 
PN O2N NDP sing 317 n n 
PN O5D NDP sing 318 n n 
O2N H21N NDP sing 319 n n 
O5D C5D NDP sing 320 n n 
C5D C4D NDP sing 321 n n 
C5D H51N NDP sing 322 n n 
C5D H52N NDP sing 323 n n 
C4D O4D NDP sing 324 n n 
C4D C3D NDP sing 325 n n 
C4D H4D NDP sing 326 n n 
O4D C1D NDP sing 327 n n 
C3D O3D NDP sing 328 n n 
C3D C2D NDP sing 329 n n 
C3D H3D NDP sing 330 n n 
O3D HO3N NDP sing 331 n n 
C2D O2D NDP sing 332 n n 
C2D C1D NDP sing 333 n n 
C2D H2D NDP sing 334 n n 
O2D HO2N NDP sing 335 n n 
C1D N1N NDP sing 336 n n 
C1D H1D NDP sing 337 n n 
N1N C2N NDP sing 338 n n 
N1N C6N NDP sing 339 n n 
C2N C3N NDP doub 340 n n 
C2N H2N NDP sing 341 n n 
C3N C7N NDP sing 342 n n 
C3N C4N NDP sing 343 n n 
C7N O7N NDP doub 344 n n 
C7N N7N NDP sing 345 n n 
N7N H71N NDP sing 346 n n 
N7N H72N NDP sing 347 n n 
C4N C5N NDP sing 348 n n 
C4N H41N NDP sing 349 n n 
C4N H42N NDP sing 350 n n 
C5N C6N NDP doub 351 n n 
C5N H5N NDP sing 352 n n 
C6N H6N NDP sing 353 n n 
P2B O1X NDP doub 354 n n 
P2B O2X NDP sing 355 n n 
P2B O3X NDP sing 356 n n 
O2X HOP2 NDP sing 357 n n 
O3X HOP3 NDP sing 358 n n 
#
_atom_sites.entry_id                     4TU5 
_atom_sites.fract_transf_matrix[1][1]    0.012574 
_atom_sites.fract_transf_matrix[1][2]    0.00726 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014519 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009126 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDP X 1 201 207 NDP NAP . 
C 3 06W X 1 202 1 06W DRG . 
D 4 HOH X 1 301 9 HOH HOH . 
D 4 HOH X 2 302 31 HOH HOH . 
D 4 HOH X 3 303 20 HOH HOH . 
D 4 HOH X 4 304 8 HOH HOH . 
D 4 HOH X 5 305 24 HOH HOH . 
D 4 HOH X 6 306 21 HOH HOH . 
D 4 HOH X 7 307 3 HOH HOH . 
D 4 HOH X 8 308 8 HOH HOH . 
D 4 HOH X 9 309 2 HOH HOH . 
D 4 HOH X 10 310 18 HOH HOH . 
D 4 HOH X 11 311 14 HOH HOH . 
D 4 HOH X 12 312 11 HOH HOH . 
D 4 HOH X 13 313 2 HOH HOH . 
D 4 HOH X 14 314 15 HOH HOH . 
D 4 HOH X 15 315 8 HOH HOH . 
D 4 HOH X 16 316 7 HOH HOH . 
D 4 HOH X 17 317 25 HOH HOH . 
D 4 HOH X 18 318 18 HOH HOH . 
D 4 HOH X 19 319 45 HOH HOH . 
D 4 HOH X 20 320 38 HOH HOH . 
D 4 HOH X 21 321 4 HOH HOH . 
D 4 HOH X 22 322 36 HOH HOH . 
D 4 HOH X 23 323 28 HOH HOH . 
D 4 HOH X 24 324 30 HOH HOH . 
D 4 HOH X 25 325 11 HOH HOH . 
D 4 HOH X 26 326 10 HOH HOH . 
D 4 HOH X 27 327 28 HOH HOH . 
D 4 HOH X 28 328 1 HOH HOH . 
D 4 HOH X 29 329 18 HOH HOH . 
D 4 HOH X 30 330 11 HOH HOH . 
D 4 HOH X 31 331 29 HOH HOH . 
D 4 HOH X 32 332 13 HOH HOH . 
D 4 HOH X 33 333 15 HOH HOH . 
D 4 HOH X 34 334 43 HOH HOH . 
D 4 HOH X 35 335 13 HOH HOH . 
D 4 HOH X 36 336 15 HOH HOH . 
D 4 HOH X 37 337 17 HOH HOH . 
D 4 HOH X 38 338 38 HOH HOH . 
D 4 HOH X 39 339 27 HOH HOH . 
D 4 HOH X 40 340 7 HOH HOH . 
D 4 HOH X 41 341 12 HOH HOH . 
D 4 HOH X 42 342 52 HOH HOH . 
D 4 HOH X 43 343 13 HOH HOH . 
D 4 HOH X 44 344 23 HOH HOH . 
D 4 HOH X 45 345 1 HOH HOH . 
D 4 HOH X 46 346 31 HOH HOH . 
D 4 HOH X 47 347 36 HOH HOH . 
D 4 HOH X 48 348 7 HOH HOH . 
D 4 HOH X 49 349 21 HOH HOH . 
D 4 HOH X 50 350 12 HOH HOH . 
D 4 HOH X 51 351 15 HOH HOH . 
D 4 HOH X 52 352 14 HOH HOH . 
D 4 HOH X 53 353 46 HOH HOH . 
D 4 HOH X 54 354 2 HOH HOH . 
D 4 HOH X 55 355 2 HOH HOH . 
D 4 HOH X 56 356 7 HOH HOH . 
D 4 HOH X 57 357 41 HOH HOH . 
D 4 HOH X 58 358 39 HOH HOH . 
D 4 HOH X 59 359 23 HOH HOH . 
D 4 HOH X 60 360 32 HOH HOH . 
D 4 HOH X 61 361 1 HOH HOH . 
D 4 HOH X 62 362 10 HOH HOH . 
D 4 HOH X 63 363 20 HOH HOH . 
D 4 HOH X 64 364 1 HOH HOH . 
D 4 HOH X 65 365 14 HOH HOH . 
D 4 HOH X 66 366 4 HOH HOH . 
D 4 HOH X 67 367 29 HOH HOH . 
D 4 HOH X 68 368 55 HOH HOH . 
D 4 HOH X 69 369 25 HOH HOH . 
D 4 HOH X 70 370 44 HOH HOH . 
D 4 HOH X 71 371 49 HOH HOH . 
D 4 HOH X 72 372 4 HOH HOH . 
D 4 HOH X 73 373 5 HOH HOH . 
D 4 HOH X 74 374 5 HOH HOH . 
D 4 HOH X 75 375 3 HOH HOH . 
D 4 HOH X 76 376 40 HOH HOH . 
D 4 HOH X 77 377 39 HOH HOH . 
D 4 HOH X 78 378 37 HOH HOH . 
D 4 HOH X 79 379 16 HOH HOH . 
D 4 HOH X 80 380 7 HOH HOH . 
D 4 HOH X 81 381 1 HOH HOH . 
D 4 HOH X 82 382 2 HOH HOH . 
D 4 HOH X 83 383 4 HOH HOH . 
D 4 HOH X 84 384 9 HOH HOH . 
D 4 HOH X 85 385 17 HOH HOH . 
D 4 HOH X 86 386 19 HOH HOH . 
D 4 HOH X 87 387 22 HOH HOH . 
D 4 HOH X 88 388 23 HOH HOH . 
D 4 HOH X 89 389 24 HOH HOH . 
D 4 HOH X 90 390 26 HOH HOH . 
D 4 HOH X 91 391 30 HOH HOH . 
D 4 HOH X 92 392 32 HOH HOH . 
D 4 HOH X 93 393 33 HOH HOH . 
D 4 HOH X 94 394 34 HOH HOH . 
D 4 HOH X 95 395 35 HOH HOH . 
D 4 HOH X 96 396 37 HOH HOH . 
D 4 HOH X 97 397 41 HOH HOH . 
D 4 HOH X 98 398 42 HOH HOH . 
D 4 HOH X 99 399 50 HOH HOH . 
D 4 HOH X 100 400 53 HOH HOH . 
D 4 HOH X 101 401 54 HOH HOH . 
D 4 HOH X 102 402 3 HOH HOH . 
D 4 HOH X 103 403 5 HOH HOH . 
D 4 HOH X 104 404 6 HOH HOH . 
D 4 HOH X 105 405 8 HOH HOH . 
D 4 HOH X 106 406 10 HOH HOH . 
D 4 HOH X 107 407 11 HOH HOH . 
D 4 HOH X 108 408 12 HOH HOH . 
D 4 HOH X 109 409 16 HOH HOH . 
D 4 HOH X 110 410 19 HOH HOH . 
D 4 HOH X 111 411 21 HOH HOH . 
D 4 HOH X 112 412 22 HOH HOH . 
D 4 HOH X 113 413 26 HOH HOH . 
D 4 HOH X 114 414 27 HOH HOH . 
D 4 HOH X 115 415 33 HOH HOH . 
D 4 HOH X 116 416 35 HOH HOH . 
D 4 HOH X 117 417 40 HOH HOH . 
D 4 HOH X 118 418 42 HOH HOH . 
D 4 HOH X 119 419 45 HOH HOH . 
D 4 HOH X 120 420 48 HOH HOH . 
D 4 HOH X 121 421 3 HOH HOH . 
D 4 HOH X 122 422 6 HOH HOH . 
D 4 HOH X 123 423 8 HOH HOH . 
D 4 HOH X 124 424 9 HOH HOH . 
D 4 HOH X 125 425 10 HOH HOH . 
D 4 HOH X 126 426 11 HOH HOH . 
D 4 HOH X 127 427 13 HOH HOH . 
D 4 HOH X 128 428 6 HOH HOH . 
D 4 HOH X 129 429 12 HOH HOH . 
D 4 HOH X 130 430 14 HOH HOH . 
D 4 HOH X 131 431 16 HOH HOH . 
D 4 HOH X 132 432 19 HOH HOH . 
D 4 HOH X 133 433 22 HOH HOH . 
D 4 HOH X 134 434 3 HOH HOH . 
D 4 HOH X 135 435 5 HOH HOH . 
D 4 HOH X 136 436 6 HOH HOH . 
D 4 HOH X 137 437 9 HOH HOH . 
D 4 HOH X 138 438 10 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . B 2 -6.765 31.559 6.723 1 23.21 ? PA NDP 201 X 1 
HETATM 2 O O1A NDP . . . B 2 -6.9 30.304 5.956 1 23.5 ? O1A NDP 201 X 1 
HETATM 3 O O2A NDP . . . B 2 -5.468 32.22 6.461 1 23.73 ? O2A NDP 201 X 1 
HETATM 4 O O5B NDP . . . B 2 -7.924 32.632 6.369 1 27.31 ? O5B NDP 201 X 1 
HETATM 5 C C5B NDP . . . B 2 -9.298 32.324 6.506 1 22.72 ? C5B NDP 201 X 1 
HETATM 6 C C4B NDP . . . B 2 -10.079 33.388 5.755 1 20.78 ? C4B NDP 201 X 1 
HETATM 7 O O4B NDP . . . B 2 -9.819 33.265 4.378 1 24.14 ? O4B NDP 201 X 1 
HETATM 8 C C3B NDP . . . B 2 -11.596 33.265 5.851 1 27.22 ? C3B NDP 201 X 1 
HETATM 9 O O3B NDP . . . B 2 -12.103 33.812 7.05 1 22.38 ? O3B NDP 201 X 1 
HETATM 10 C C2B NDP . . . B 2 -12.026 34.03 4.609 1 24.61 ? C2B NDP 201 X 1 
HETATM 11 O O2B NDP . . . B 2 -11.846 35.422 4.775 1 25.57 ? O2B NDP 201 X 1 
HETATM 12 C C1B NDP . . . B 2 -10.97 33.608 3.617 1 24.61 ? C1B NDP 201 X 1 
HETATM 13 N N9A NDP . . . B 2 -11.495 32.447 2.888 1 24.65 ? N9A NDP 201 X 1 
HETATM 14 C C8A NDP . . . B 2 -11.109 31.135 3.013 1 27.14 ? C8A NDP 201 X 1 
HETATM 15 N N7A NDP . . . B 2 -11.831 30.392 2.146 1 30.06 ? N7A NDP 201 X 1 
HETATM 16 C C5A NDP . . . B 2 -12.678 31.215 1.481 1 30.17 ? C5A NDP 201 X 1 
HETATM 17 C C6A NDP . . . B 2 -13.636 30.991 0.504 1 31.92 ? C6A NDP 201 X 1 
HETATM 18 N N6A NDP . . . B 2 -13.847 29.757 0.054 1 36.57 ? N6A NDP 201 X 1 
HETATM 19 N N1A NDP . . . B 2 -14.361 32.052 -0.007 1 28.04 ? N1A NDP 201 X 1 
HETATM 20 C C2A NDP . . . B 2 -14.142 33.334 0.459 1 29.89 ? C2A NDP 201 X 1 
HETATM 21 N N3A NDP . . . B 2 -13.195 33.549 1.442 1 34.07 ? N3A NDP 201 X 1 
HETATM 22 C C4A NDP . . . B 2 -12.479 32.506 1.941 1 31.18 ? C4A NDP 201 X 1 
HETATM 23 O O3 NDP . . . B 2 -7.055 31.327 8.288 1 28.49 ? O3 NDP 201 X 1 
HETATM 24 P PN NDP . . . B 2 -6.905 30.132 9.36 1 25.79 ? PN NDP 201 X 1 
HETATM 25 O O1N NDP . . . B 2 -7.382 30.69 10.648 1 26.99 ? O1N NDP 201 X 1 
HETATM 26 O O2N NDP . . . B 2 -7.568 28.936 8.787 1 28.22 ? O2N NDP 201 X 1 
HETATM 27 O O5D NDP . . . B 2 -5.292 29.913 9.465 1 26.94 ? O5D NDP 201 X 1 
HETATM 28 C C5D NDP . . . B 2 -4.46 30.906 10.058 1 23.09 ? C5D NDP 201 X 1 
HETATM 29 C C4D NDP . . . B 2 -3.255 30.301 10.779 1 25.78 ? C4D NDP 201 X 1 
HETATM 30 O O4D NDP . . . B 2 -2.409 29.537 9.911 1 25.17 ? O4D NDP 201 X 1 
HETATM 31 C C3D NDP . . . B 2 -2.354 31.371 11.372 1 29.14 ? C3D NDP 201 X 1 
HETATM 32 O O3D NDP . . . B 2 -1.945 30.891 12.637 1 20.51 ? O3D NDP 201 X 1 
HETATM 33 C C2D NDP . . . B 2 -1.15 31.418 10.442 1 22.16 ? C2D NDP 201 X 1 
HETATM 34 O O2D NDP . . . B 2 -0.002 31.78 11.15 1 21.53 ? O2D NDP 201 X 1 
HETATM 35 C C1D NDP . . . B 2 -1.048 29.966 10.005 1 26.32 ? C1D NDP 201 X 1 
HETATM 36 N N1N NDP . . . B 2 -0.264 29.699 8.763 1 20.96 ? N1N NDP 201 X 1 
HETATM 37 C C2N NDP . . . B 2 0.791 28.829 8.831 1 22.73 ? C2N NDP 201 X 1 
HETATM 38 C C3N NDP . . . B 2 1.553 28.508 7.705 1 26.33 ? C3N NDP 201 X 1 
HETATM 39 C C7N NDP . . . B 2 2.665 27.5 7.814 1 22.48 ? C7N NDP 201 X 1 
HETATM 40 O O7N NDP . . . B 2 3.18 26.92 6.641 1 23.01 ? O7N NDP 201 X 1 
HETATM 41 N N7N NDP . . . B 2 3.137 27.158 9.02 1 22.88 ? N7N NDP 201 X 1 
HETATM 42 C C4N NDP . . . B 2 1.236 29.075 6.473 1 22.85 ? C4N NDP 201 X 1 
HETATM 43 C C5N NDP . . . B 2 0.16 29.965 6.416 1 24.09 ? C5N NDP 201 X 1 
HETATM 44 C C6N NDP . . . B 2 -0.58 30.264 7.56 1 23.93 ? C6N NDP 201 X 1 
HETATM 45 P P2B NDP . . . B 2 -13.047 36.403 5.252 1 25.26 ? P2B NDP 201 X 1 
HETATM 46 O O1X NDP . . . B 2 -13.41 35.963 6.657 1 22.03 ? O1X NDP 201 X 1 
HETATM 47 O O2X NDP . . . B 2 -12.468 37.803 5.244 1 24.35 ? O2X NDP 201 X 1 
HETATM 48 O O3X NDP . . . B 2 -14.223 36.215 4.318 1 26 ? O3X NDP 201 X 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           48 
#