data_4TU5 # _model_server_result.job_id bsyE9IS9WUA1oL2BjY2YbQ _model_server_result.datetime_utc '2024-11-23 21:34:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tu5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4TU5 # _exptl.entry_id 4TU5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 373.451 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-ethyl-5-{(3S)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TU5 _cell.length_a 79.529 _cell.length_b 79.529 _cell.length_c 109.581 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TU5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N5 O' _chem_comp.formula_weight 373.451 _chem_comp.id 06W _chem_comp.mon_nstd_flag . _chem_comp.name 6-ethyl-5-{(3S)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 06W doub 1 n y C6 N1 06W sing 2 n y N3 C2 06W sing 3 n y C2 NAH 06W sing 4 n n C4 N3 06W doub 5 n y CAI C4 06W sing 6 n n C4 C5 06W sing 7 n y CAK C5 06W sing 8 n n C5 C6 06W doub 9 n y C6 NAJ 06W sing 10 n n CAU CAA 06W doub 11 n y CAY CAA 06W sing 12 n y CAA HAA 06W sing 13 n n NAH HNAH 06W sing 14 n n NAH HNAA 06W sing 15 n n CAI CAZ 06W sing 16 n n CAI HAI 06W sing 17 n n CAI HAIA 06W sing 18 n n NAJ HNAJ 06W sing 19 n n NAJ HNAB 06W sing 20 n n CAL CAK 06W trip 21 n n CAM CAL 06W sing 22 n n CAN CAM 06W sing 23 n n CAM CAO 06W sing 24 n n CAM HAM 06W sing 25 n n CAN HAN 06W sing 26 n n CAN HANA 06W sing 27 n n CAN HANB 06W sing 28 n n CAT CAO 06W doub 29 n y CAO CAP 06W sing 30 n y CAP CAQ 06W doub 31 n y CAP HAP 06W sing 32 n n CAR CAQ 06W sing 33 n y CAQ OBA 06W sing 34 n n CAS CAR 06W doub 35 n y CAR HAR 06W sing 36 n n CAU CAS 06W sing 37 n n CAT CAS 06W sing 38 n y CAT HAT 06W sing 39 n n CAV CAU 06W sing 40 n y CAW CAV 06W doub 41 n y CAV HAV 06W sing 42 n n CAW NAX 06W sing 43 n y CAW HAW 06W sing 44 n n NAX CAY 06W doub 45 n y CAY HAY 06W sing 46 n n CAZ HAZ 06W sing 47 n n CAZ HAZA 06W sing 48 n n CAZ HAZB 06W sing 49 n n OBA CBB 06W sing 50 n n CBB HBB 06W sing 51 n n CBB HBBA 06W sing 52 n n CBB HBBB 06W sing 53 n n # _atom_sites.entry_id 4TU5 _atom_sites.fract_transf_matrix[1][1] 0.012574 _atom_sites.fract_transf_matrix[1][2] 0.00726 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009126 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP X 1 201 207 NDP NAP . C 3 06W X 1 202 1 06W DRG . D 4 HOH X 1 301 9 HOH HOH . D 4 HOH X 2 302 31 HOH HOH . D 4 HOH X 3 303 20 HOH HOH . D 4 HOH X 4 304 8 HOH HOH . D 4 HOH X 5 305 24 HOH HOH . D 4 HOH X 6 306 21 HOH HOH . D 4 HOH X 7 307 3 HOH HOH . D 4 HOH X 8 308 8 HOH HOH . D 4 HOH X 9 309 2 HOH HOH . D 4 HOH X 10 310 18 HOH HOH . D 4 HOH X 11 311 14 HOH HOH . D 4 HOH X 12 312 11 HOH HOH . D 4 HOH X 13 313 2 HOH HOH . D 4 HOH X 14 314 15 HOH HOH . D 4 HOH X 15 315 8 HOH HOH . D 4 HOH X 16 316 7 HOH HOH . D 4 HOH X 17 317 25 HOH HOH . D 4 HOH X 18 318 18 HOH HOH . D 4 HOH X 19 319 45 HOH HOH . D 4 HOH X 20 320 38 HOH HOH . D 4 HOH X 21 321 4 HOH HOH . D 4 HOH X 22 322 36 HOH HOH . D 4 HOH X 23 323 28 HOH HOH . D 4 HOH X 24 324 30 HOH HOH . D 4 HOH X 25 325 11 HOH HOH . D 4 HOH X 26 326 10 HOH HOH . D 4 HOH X 27 327 28 HOH HOH . D 4 HOH X 28 328 1 HOH HOH . D 4 HOH X 29 329 18 HOH HOH . D 4 HOH X 30 330 11 HOH HOH . D 4 HOH X 31 331 29 HOH HOH . D 4 HOH X 32 332 13 HOH HOH . D 4 HOH X 33 333 15 HOH HOH . D 4 HOH X 34 334 43 HOH HOH . D 4 HOH X 35 335 13 HOH HOH . D 4 HOH X 36 336 15 HOH HOH . D 4 HOH X 37 337 17 HOH HOH . D 4 HOH X 38 338 38 HOH HOH . D 4 HOH X 39 339 27 HOH HOH . D 4 HOH X 40 340 7 HOH HOH . D 4 HOH X 41 341 12 HOH HOH . D 4 HOH X 42 342 52 HOH HOH . D 4 HOH X 43 343 13 HOH HOH . D 4 HOH X 44 344 23 HOH HOH . D 4 HOH X 45 345 1 HOH HOH . D 4 HOH X 46 346 31 HOH HOH . D 4 HOH X 47 347 36 HOH HOH . D 4 HOH X 48 348 7 HOH HOH . D 4 HOH X 49 349 21 HOH HOH . D 4 HOH X 50 350 12 HOH HOH . D 4 HOH X 51 351 15 HOH HOH . D 4 HOH X 52 352 14 HOH HOH . D 4 HOH X 53 353 46 HOH HOH . D 4 HOH X 54 354 2 HOH HOH . D 4 HOH X 55 355 2 HOH HOH . D 4 HOH X 56 356 7 HOH HOH . D 4 HOH X 57 357 41 HOH HOH . D 4 HOH X 58 358 39 HOH HOH . D 4 HOH X 59 359 23 HOH HOH . D 4 HOH X 60 360 32 HOH HOH . D 4 HOH X 61 361 1 HOH HOH . D 4 HOH X 62 362 10 HOH HOH . D 4 HOH X 63 363 20 HOH HOH . D 4 HOH X 64 364 1 HOH HOH . D 4 HOH X 65 365 14 HOH HOH . D 4 HOH X 66 366 4 HOH HOH . D 4 HOH X 67 367 29 HOH HOH . D 4 HOH X 68 368 55 HOH HOH . D 4 HOH X 69 369 25 HOH HOH . D 4 HOH X 70 370 44 HOH HOH . D 4 HOH X 71 371 49 HOH HOH . D 4 HOH X 72 372 4 HOH HOH . D 4 HOH X 73 373 5 HOH HOH . D 4 HOH X 74 374 5 HOH HOH . D 4 HOH X 75 375 3 HOH HOH . D 4 HOH X 76 376 40 HOH HOH . D 4 HOH X 77 377 39 HOH HOH . D 4 HOH X 78 378 37 HOH HOH . D 4 HOH X 79 379 16 HOH HOH . D 4 HOH X 80 380 7 HOH HOH . D 4 HOH X 81 381 1 HOH HOH . D 4 HOH X 82 382 2 HOH HOH . D 4 HOH X 83 383 4 HOH HOH . D 4 HOH X 84 384 9 HOH HOH . D 4 HOH X 85 385 17 HOH HOH . D 4 HOH X 86 386 19 HOH HOH . D 4 HOH X 87 387 22 HOH HOH . D 4 HOH X 88 388 23 HOH HOH . D 4 HOH X 89 389 24 HOH HOH . D 4 HOH X 90 390 26 HOH HOH . D 4 HOH X 91 391 30 HOH HOH . D 4 HOH X 92 392 32 HOH HOH . D 4 HOH X 93 393 33 HOH HOH . D 4 HOH X 94 394 34 HOH HOH . D 4 HOH X 95 395 35 HOH HOH . D 4 HOH X 96 396 37 HOH HOH . D 4 HOH X 97 397 41 HOH HOH . D 4 HOH X 98 398 42 HOH HOH . D 4 HOH X 99 399 50 HOH HOH . D 4 HOH X 100 400 53 HOH HOH . D 4 HOH X 101 401 54 HOH HOH . D 4 HOH X 102 402 3 HOH HOH . D 4 HOH X 103 403 5 HOH HOH . D 4 HOH X 104 404 6 HOH HOH . D 4 HOH X 105 405 8 HOH HOH . D 4 HOH X 106 406 10 HOH HOH . D 4 HOH X 107 407 11 HOH HOH . D 4 HOH X 108 408 12 HOH HOH . D 4 HOH X 109 409 16 HOH HOH . D 4 HOH X 110 410 19 HOH HOH . D 4 HOH X 111 411 21 HOH HOH . D 4 HOH X 112 412 22 HOH HOH . D 4 HOH X 113 413 26 HOH HOH . D 4 HOH X 114 414 27 HOH HOH . D 4 HOH X 115 415 33 HOH HOH . D 4 HOH X 116 416 35 HOH HOH . D 4 HOH X 117 417 40 HOH HOH . D 4 HOH X 118 418 42 HOH HOH . D 4 HOH X 119 419 45 HOH HOH . D 4 HOH X 120 420 48 HOH HOH . D 4 HOH X 121 421 3 HOH HOH . D 4 HOH X 122 422 6 HOH HOH . D 4 HOH X 123 423 8 HOH HOH . D 4 HOH X 124 424 9 HOH HOH . D 4 HOH X 125 425 10 HOH HOH . D 4 HOH X 126 426 11 HOH HOH . D 4 HOH X 127 427 13 HOH HOH . D 4 HOH X 128 428 6 HOH HOH . D 4 HOH X 129 429 12 HOH HOH . D 4 HOH X 130 430 14 HOH HOH . D 4 HOH X 131 431 16 HOH HOH . D 4 HOH X 132 432 19 HOH HOH . D 4 HOH X 133 433 22 HOH HOH . D 4 HOH X 134 434 3 HOH HOH . D 4 HOH X 135 435 5 HOH HOH . D 4 HOH X 136 436 6 HOH HOH . D 4 HOH X 137 437 9 HOH HOH . D 4 HOH X 138 438 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 06W . . . C 3 5.406 27.607 3.973 1 21.85 ? N1 06W 202 X 1 HETATM 2 C C2 06W . . . C 3 6.582 27.479 4.588 1 20.45 ? C2 06W 202 X 1 HETATM 3 N N3 06W . . . C 3 7.001 28.421 5.468 1 22.87 ? N3 06W 202 X 1 HETATM 4 C C4 06W . . . C 3 6.245 29.505 5.76 1 21.97 ? C4 06W 202 X 1 HETATM 5 C C5 06W . . . C 3 5.024 29.647 5.133 1 22.3 ? C5 06W 202 X 1 HETATM 6 C C6 06W . . . C 3 4.625 28.667 4.236 1 21.6 ? C6 06W 202 X 1 HETATM 7 C CAA 06W . . . C 3 6.93 35.49 6.577 1 57.98 ? CAA 06W 202 X 1 HETATM 8 N NAH 06W . . . C 3 7.332 26.407 4.304 1 24.23 ? NAH 06W 202 X 1 HETATM 9 C CAI 06W . . . C 3 6.666 30.473 6.674 1 25.49 ? CAI 06W 202 X 1 HETATM 10 N NAJ 06W . . . C 3 3.445 28.822 3.65 1 17.79 ? NAJ 06W 202 X 1 HETATM 11 C CAK 06W . . . C 3 4.215 30.764 5.397 1 27.46 ? CAK 06W 202 X 1 HETATM 12 C CAL 06W . . . C 3 3.499 31.713 5.61 1 28.33 ? CAL 06W 202 X 1 HETATM 13 C CAM 06W . . . C 3 2.599 32.856 5.856 1 26.54 ? CAM 06W 202 X 1 HETATM 14 C CAN 06W . . . C 3 2.328 33.018 7.361 1 24.66 ? CAN 06W 202 X 1 HETATM 15 C CAO 06W . . . C 3 3.15 34.024 5.367 1 34.46 ? CAO 06W 202 X 1 HETATM 16 C CAP 06W . . . C 3 2.375 34.802 4.509 1 37.94 ? CAP 06W 202 X 1 HETATM 17 C CAQ 06W . . . C 3 2.869 35.993 4.001 1 40.2 ? CAQ 06W 202 X 1 HETATM 18 C CAR 06W . . . C 3 4.149 36.409 4.365 1 44.88 ? CAR 06W 202 X 1 HETATM 19 C CAS 06W . . . C 3 4.933 35.633 5.217 1 48.26 ? CAS 06W 202 X 1 HETATM 20 C CAT 06W . . . C 3 4.429 34.439 5.746 1 35.72 ? CAT 06W 202 X 1 HETATM 21 C CAU 06W . . . C 3 6.186 36.121 5.579 1 52.34 ? CAU 06W 202 X 1 HETATM 22 C CAV 06W . . . C 3 6.649 37.3 4.996 1 50.06 ? CAV 06W 202 X 1 HETATM 23 C CAW 06W . . . C 3 7.885 37.824 5.36 1 58.17 ? CAW 06W 202 X 1 HETATM 24 N NAX 06W . . . C 3 8.65 37.177 6.346 1 60.43 ? NAX 06W 202 X 1 HETATM 25 C CAY 06W . . . C 3 8.166 36.009 6.955 1 58.66 ? CAY 06W 202 X 1 HETATM 26 C CAZ 06W . . . C 3 7.724 31.376 6.032 1 31.87 ? CAZ 06W 202 X 1 HETATM 27 O OBA 06W . . . C 3 2.094 36.73 3.151 1 43.13 ? OBA 06W 202 X 1 HETATM 28 C CBB 06W . . . C 3 2.749 37.936 2.711 1 44.48 ? CBB 06W 202 X 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #