data_4TUV
#
_model_server_result.job_id            B-USJugyP9eY2wUj4LmE-A 
_model_server_result.datetime_utc      '2024-11-28 01:20:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tuv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    4TUV 
#
_exptl.entry_id    4TUV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4TUV 
_cell.length_a            165.8 
_cell.length_b            165.8 
_cell.length_c            75.86 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TUV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 317 A CYS 317 1_555 B FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc2 B FE HEM . A HEM 401 1_555 C N1 CPZ . A CPZ 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 149 n n 
CHA C4D HEM doub 150 n n 
CHA HHA HEM sing 151 n n 
CHB C4A HEM sing 152 n n 
CHB C1B HEM doub 153 n n 
CHB HHB HEM sing 154 n n 
CHC C4B HEM sing 155 n n 
CHC C1C HEM doub 156 n n 
CHC HHC HEM sing 157 n n 
CHD C4C HEM doub 158 n n 
CHD C1D HEM sing 159 n n 
CHD HHD HEM sing 160 n n 
C1A C2A HEM doub 161 n y 
C1A NA HEM sing 162 n y 
C2A C3A HEM sing 163 n y 
C2A CAA HEM sing 164 n n 
C3A C4A HEM doub 165 n y 
C3A CMA HEM sing 166 n n 
C4A NA HEM sing 167 n y 
CMA HMA HEM sing 168 n n 
CMA HMAA HEM sing 169 n n 
CMA HMAB HEM sing 170 n n 
CAA CBA HEM sing 171 n n 
CAA HAA HEM sing 172 n n 
CAA HAAA HEM sing 173 n n 
CBA CGA HEM sing 174 n n 
CBA HBA HEM sing 175 n n 
CBA HBAA HEM sing 176 n n 
CGA O1A HEM doub 177 n n 
CGA O2A HEM sing 178 n n 
C1B C2B HEM sing 179 n n 
C1B NB HEM sing 180 n n 
C2B C3B HEM doub 181 n n 
C2B CMB HEM sing 182 n n 
C3B C4B HEM sing 183 n n 
C3B CAB HEM sing 184 n n 
C4B NB HEM doub 185 n n 
CMB HMB HEM sing 186 n n 
CMB HMBA HEM sing 187 n n 
CMB HMBB HEM sing 188 n n 
CAB CBB HEM doub 189 n n 
CAB HAB HEM sing 190 n n 
CBB HBB HEM sing 191 n n 
CBB HBBA HEM sing 192 n n 
C1C C2C HEM sing 193 n y 
C1C NC HEM sing 194 n y 
C2C C3C HEM doub 195 n y 
C2C CMC HEM sing 196 n n 
C3C C4C HEM sing 197 n y 
C3C CAC HEM sing 198 n n 
C4C NC HEM sing 199 n y 
CMC HMC HEM sing 200 n n 
CMC HMCA HEM sing 201 n n 
CMC HMCB HEM sing 202 n n 
CAC CBC HEM doub 203 n n 
CAC HAC HEM sing 204 n n 
CBC HBC HEM sing 205 n n 
CBC HBCA HEM sing 206 n n 
C1D C2D HEM sing 207 n n 
C1D ND HEM doub 208 n n 
C2D C3D HEM doub 209 n n 
C2D CMD HEM sing 210 n n 
C3D C4D HEM sing 211 n n 
C3D CAD HEM sing 212 n n 
C4D ND HEM sing 213 n n 
CMD HMD HEM sing 214 n n 
CMD HMDA HEM sing 215 n n 
CMD HMDB HEM sing 216 n n 
CAD CBD HEM sing 217 n n 
CAD HAD HEM sing 218 n n 
CAD HADA HEM sing 219 n n 
CBD CGD HEM sing 220 n n 
CBD HBD HEM sing 221 n n 
CBD HBDA HEM sing 222 n n 
CGD O1D HEM doub 223 n n 
CGD O2D HEM sing 224 n n 
O2A H2A HEM sing 225 n n 
O2D H2D HEM sing 226 n n 
FE NA HEM sing 227 n n 
FE NB HEM sing 228 n n 
FE NC HEM sing 229 n n 
FE ND HEM sing 230 n n 
#
_atom_sites.entry_id                     4TUV 
_atom_sites.fract_transf_matrix[1][1]    0.006031 
_atom_sites.fract_transf_matrix[1][2]    0.003482 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006964 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013182 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 401 410 HEM HEM . 
C 3 CPZ A 1 402 500 CPZ CPZ . 
D 4 HOH A 1 501 68 HOH HOH . 
D 4 HOH A 2 502 33 HOH HOH . 
D 4 HOH A 3 503 36 HOH HOH . 
D 4 HOH A 4 504 4 HOH HOH . 
D 4 HOH A 5 505 59 HOH HOH . 
D 4 HOH A 6 506 29 HOH HOH . 
D 4 HOH A 7 507 1 HOH HOH . 
D 4 HOH A 8 508 73 HOH HOH . 
D 4 HOH A 9 509 71 HOH HOH . 
D 4 HOH A 10 510 66 HOH HOH . 
D 4 HOH A 11 511 65 HOH HOH . 
D 4 HOH A 12 512 51 HOH HOH . 
D 4 HOH A 13 513 63 HOH HOH . 
D 4 HOH A 14 514 67 HOH HOH . 
D 4 HOH A 15 515 62 HOH HOH . 
D 4 HOH A 16 516 61 HOH HOH . 
D 4 HOH A 17 517 58 HOH HOH . 
D 4 HOH A 18 518 2 HOH HOH . 
D 4 HOH A 19 519 3 HOH HOH . 
D 4 HOH A 20 520 5 HOH HOH . 
D 4 HOH A 21 521 6 HOH HOH . 
D 4 HOH A 22 522 7 HOH HOH . 
D 4 HOH A 23 523 8 HOH HOH . 
D 4 HOH A 24 524 9 HOH HOH . 
D 4 HOH A 25 525 10 HOH HOH . 
D 4 HOH A 26 526 11 HOH HOH . 
D 4 HOH A 27 527 12 HOH HOH . 
D 4 HOH A 28 528 13 HOH HOH . 
D 4 HOH A 29 529 14 HOH HOH . 
D 4 HOH A 30 530 15 HOH HOH . 
D 4 HOH A 31 531 16 HOH HOH . 
D 4 HOH A 32 532 17 HOH HOH . 
D 4 HOH A 33 533 18 HOH HOH . 
D 4 HOH A 34 534 19 HOH HOH . 
D 4 HOH A 35 535 20 HOH HOH . 
D 4 HOH A 36 536 21 HOH HOH . 
D 4 HOH A 37 537 22 HOH HOH . 
D 4 HOH A 38 538 23 HOH HOH . 
D 4 HOH A 39 539 24 HOH HOH . 
D 4 HOH A 40 540 25 HOH HOH . 
D 4 HOH A 41 541 26 HOH HOH . 
D 4 HOH A 42 542 28 HOH HOH . 
D 4 HOH A 43 543 30 HOH HOH . 
D 4 HOH A 44 544 32 HOH HOH . 
D 4 HOH A 45 545 34 HOH HOH . 
D 4 HOH A 46 546 35 HOH HOH . 
D 4 HOH A 47 547 37 HOH HOH . 
D 4 HOH A 48 548 38 HOH HOH . 
D 4 HOH A 49 549 39 HOH HOH . 
D 4 HOH A 50 550 40 HOH HOH . 
D 4 HOH A 51 551 41 HOH HOH . 
D 4 HOH A 52 552 42 HOH HOH . 
D 4 HOH A 53 553 43 HOH HOH . 
D 4 HOH A 54 554 44 HOH HOH . 
D 4 HOH A 55 555 45 HOH HOH . 
D 4 HOH A 56 556 47 HOH HOH . 
D 4 HOH A 57 557 48 HOH HOH . 
D 4 HOH A 58 558 49 HOH HOH . 
D 4 HOH A 59 559 53 HOH HOH . 
D 4 HOH A 60 560 54 HOH HOH . 
D 4 HOH A 61 561 55 HOH HOH . 
D 4 HOH A 62 562 57 HOH HOH . 
D 4 HOH A 63 563 60 HOH HOH . 
D 4 HOH A 64 564 69 HOH HOH . 
D 4 HOH A 65 565 70 HOH HOH . 
D 4 HOH A 66 566 72 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHB HEM . . . B 2 -15.143 -55.314 -7.672 1 44.11 ? CHB HEM 401 A 1 
HETATM 2 C CHC HEM . . . B 2 -13.969 -58.118 -3.92 1 39.47 ? CHC HEM 401 A 1 
HETATM 3 C CHD HEM . . . B 2 -18.213 -60.339 -4.474 1 36.72 ? CHD HEM 401 A 1 
HETATM 4 C C1A HEM . . . B 2 -18.577 -56.141 -7.893 1 34.29 ? C1A HEM 401 A 1 
HETATM 5 C C2A HEM . . . B 2 -18.494 -55.087 -8.871 1 39.17 ? C2A HEM 401 A 1 
HETATM 6 C C3A HEM . . . B 2 -17.226 -54.681 -8.89 1 40.05 ? C3A HEM 401 A 1 
HETATM 7 C C4A HEM . . . B 2 -16.484 -55.469 -7.926 1 39.28 ? C4A HEM 401 A 1 
HETATM 8 C CMA HEM . . . B 2 -16.633 -53.576 -9.777 1 34.44 ? CMA HEM 401 A 1 
HETATM 9 C CAA HEM . . . B 2 -19.662 -54.548 -9.725 1 33.97 ? CAA HEM 401 A 1 
HETATM 10 C CBA HEM . . . B 2 -20.042 -55.535 -10.828 1 30.66 ? CBA HEM 401 A 1 
HETATM 11 C CGA HEM . . . B 2 -21.178 -54.973 -11.645 1 37.77 ? CGA HEM 401 A 1 
HETATM 12 O O1A HEM . . . B 2 -21.676 -53.865 -11.318 1 41.44 ? O1A HEM 401 A 1 
HETATM 13 O O2A HEM . . . B 2 -21.593 -55.624 -12.637 1 42.19 ? O2A HEM 401 A 1 
HETATM 14 C C1B HEM . . . B 2 -14.443 -55.888 -6.645 1 39.62 ? C1B HEM 401 A 1 
HETATM 15 C C2B HEM . . . B 2 -13.084 -55.552 -6.27 1 39.62 ? C2B HEM 401 A 1 
HETATM 16 C C3B HEM . . . B 2 -12.76 -56.348 -5.239 1 37.37 ? C3B HEM 401 A 1 
HETATM 17 C C4B HEM . . . B 2 -13.902 -57.186 -4.934 1 37.52 ? C4B HEM 401 A 1 
HETATM 18 C CMB HEM . . . B 2 -12.219 -54.482 -6.982 1 35.84 ? CMB HEM 401 A 1 
HETATM 19 C CAB HEM . . . B 2 -11.45 -56.408 -4.429 1 38.08 ? CAB HEM 401 A 1 
HETATM 20 C CBB HEM . . . B 2 -10.524 -55.443 -4.458 1 45.45 ? CBB HEM 401 A 1 
HETATM 21 C C1C HEM . . . B 2 -15.035 -58.953 -3.711 1 39.89 ? C1C HEM 401 A 1 
HETATM 22 C C2C HEM . . . B 2 -15.181 -59.935 -2.646 1 38.93 ? C2C HEM 401 A 1 
HETATM 23 C C3C HEM . . . B 2 -16.375 -60.531 -2.834 1 36.09 ? C3C HEM 401 A 1 
HETATM 24 C C4C HEM . . . B 2 -16.991 -59.958 -4.004 1 36.11 ? C4C HEM 401 A 1 
HETATM 25 C CMC HEM . . . B 2 -14.154 -60.207 -1.517 1 36.57 ? CMC HEM 401 A 1 
HETATM 26 C CAC HEM . . . B 2 -17.087 -61.663 -2.06 1 33.28 ? CAC HEM 401 A 1 
HETATM 27 C CBC HEM . . . B 2 -16.497 -62.516 -1.226 1 39.65 ? CBC HEM 401 A 1 
HETATM 28 C C1D HEM . . . B 2 -19.065 -59.615 -5.263 1 33.9 ? C1D HEM 401 A 1 
HETATM 29 C C2D HEM . . . B 2 -20.473 -59.901 -5.433 1 34.41 ? C2D HEM 401 A 1 
HETATM 30 C C3D HEM . . . B 2 -20.956 -58.992 -6.276 1 38.28 ? C3D HEM 401 A 1 
HETATM 31 C C4D HEM . . . B 2 -19.883 -58.124 -6.674 1 36.98 ? C4D HEM 401 A 1 
HETATM 32 C CMD HEM . . . B 2 -21.288 -61.026 -4.755 1 32.96 ? CMD HEM 401 A 1 
HETATM 33 C CAD HEM . . . B 2 -22.393 -58.858 -6.767 1 31.37 ? CAD HEM 401 A 1 
HETATM 34 C CBD HEM . . . B 2 -23.081 -57.767 -5.955 1 32.34 ? CBD HEM 401 A 1 
HETATM 35 C CGD HEM . . . B 2 -24.474 -57.536 -6.512 1 35.58 ? CGD HEM 401 A 1 
HETATM 36 O O1D HEM . . . B 2 -24.803 -58.039 -7.62 1 34.74 ? O1D HEM 401 A 1 
HETATM 37 O O2D HEM . . . B 2 -25.267 -56.833 -5.851 1 38 ? O2D HEM 401 A 1 
HETATM 38 N NA HEM . . . B 2 -17.337 -56.362 -7.322 1 31.33 ? NA HEM 401 A 1 
HETATM 39 N NB HEM . . . B 2 -14.918 -56.881 -5.818 1 36.34 ? NB HEM 401 A 1 
HETATM 40 N NC HEM . . . B 2 -16.158 -59.001 -4.531 1 38.02 ? NC HEM 401 A 1 
HETATM 41 N ND HEM . . . B 2 -18.719 -58.527 -6.044 1 36.71 ? ND HEM 401 A 1 
HETATM 42 FE FE HEM . . . B 2 -16.799 -57.682 -5.83 1 37.26 ? FE HEM 401 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           42 
#