data_4TUZ # _model_server_result.job_id utKSSFYYOW70066J5N_Ecg _model_server_result.datetime_utc '2024-11-30 15:46:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tuz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":603}' # _entry.id 4TUZ # _exptl.entry_id 4TUZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.59 _cell.angle_gamma 90 _cell.entry_id 4TUZ _cell.length_a 55.96 _cell.length_b 83.43 _cell.length_c 58.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 83 A GLU 380 1_555 A N CSO 84 A CSO 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CSO 84 A CSO 381 1_555 A N ALA 85 A ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C LYS 232 A LYS 529 1_555 A N CSO 233 A CSO 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CSO 233 A CSO 530 1_555 A N LYS 234 A LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 B C GLU 83 B GLU 380 1_555 B N CSO 84 B CSO 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 B C CSO 84 B CSO 381 1_555 B N ALA 85 B ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 B C LYS 119 B LYS 416 1_555 B N CSO 120 B CSO 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 B C CSO 120 B CSO 417 1_555 B N VAL 121 B VAL 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 B C LYS 232 B LYS 529 1_555 B N CSO 233 B CSO 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 B C CSO 233 B CSO 530 1_555 B N LYS 234 B LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 145 n n C1 C2 EDO sing 146 n n C1 H11 EDO sing 147 n n C1 H12 EDO sing 148 n n O1 HO1 EDO sing 149 n n C2 O2 EDO sing 150 n n C2 H21 EDO sing 151 n n C2 H22 EDO sing 152 n n O2 HO2 EDO sing 153 n n # _atom_sites.entry_id 4TUZ _atom_sites.fract_transf_matrix[1][1] 0.01787 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006011 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011986 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 36J A 1 601 1 36J DRG . F 5 GOL A 1 602 3 GOL GOL . G 6 EDO A 1 603 4 EDO EDO . H 5 GOL A 1 604 5 GOL GOL . I 4 36J B 1 601 1 36J DRG . J 6 EDO B 1 602 1 EDO EDO . K 5 GOL B 1 603 2 GOL GOL . L 5 GOL B 1 604 6 GOL GOL . M 7 HOH A 1 701 241 HOH HOH . M 7 HOH A 2 702 129 HOH HOH . M 7 HOH A 3 703 248 HOH HOH . M 7 HOH A 4 704 117 HOH HOH . M 7 HOH A 5 705 253 HOH HOH . M 7 HOH A 6 706 165 HOH HOH . M 7 HOH A 7 707 193 HOH HOH . M 7 HOH A 8 708 61 HOH HOH . M 7 HOH A 9 709 303 HOH HOH . M 7 HOH A 10 710 176 HOH HOH . M 7 HOH A 11 711 149 HOH HOH . M 7 HOH A 12 712 263 HOH HOH . M 7 HOH A 13 713 68 HOH HOH . M 7 HOH A 14 714 275 HOH HOH . M 7 HOH A 15 715 216 HOH HOH . M 7 HOH A 16 716 252 HOH HOH . M 7 HOH A 17 717 169 HOH HOH . M 7 HOH A 18 718 70 HOH HOH . M 7 HOH A 19 719 51 HOH HOH . M 7 HOH A 20 720 245 HOH HOH . M 7 HOH A 21 721 133 HOH HOH . M 7 HOH A 22 722 47 HOH HOH . M 7 HOH A 23 723 177 HOH HOH . M 7 HOH A 24 724 93 HOH HOH . M 7 HOH A 25 725 40 HOH HOH . M 7 HOH A 26 726 171 HOH HOH . M 7 HOH A 27 727 146 HOH HOH . M 7 HOH A 28 728 31 HOH HOH . M 7 HOH A 29 729 235 HOH HOH . M 7 HOH A 30 730 208 HOH HOH . M 7 HOH A 31 731 310 HOH HOH . M 7 HOH A 32 732 276 HOH HOH . M 7 HOH A 33 733 238 HOH HOH . M 7 HOH A 34 734 172 HOH HOH . M 7 HOH A 35 735 96 HOH HOH . M 7 HOH A 36 736 89 HOH HOH . M 7 HOH A 37 737 106 HOH HOH . M 7 HOH A 38 738 236 HOH HOH . M 7 HOH A 39 739 25 HOH HOH . M 7 HOH A 40 740 71 HOH HOH . M 7 HOH A 41 741 99 HOH HOH . M 7 HOH A 42 742 209 HOH HOH . M 7 HOH A 43 743 196 HOH HOH . M 7 HOH A 44 744 87 HOH HOH . M 7 HOH A 45 745 120 HOH HOH . M 7 HOH A 46 746 168 HOH HOH . M 7 HOH A 47 747 4 HOH HOH . M 7 HOH A 48 748 161 HOH HOH . M 7 HOH A 49 749 63 HOH HOH . M 7 HOH A 50 750 299 HOH HOH . M 7 HOH A 51 751 72 HOH HOH . M 7 HOH A 52 752 115 HOH HOH . M 7 HOH A 53 753 256 HOH HOH . M 7 HOH A 54 754 67 HOH HOH . M 7 HOH A 55 755 164 HOH HOH . M 7 HOH A 56 756 223 HOH HOH . M 7 HOH A 57 757 43 HOH HOH . M 7 HOH A 58 758 246 HOH HOH . M 7 HOH A 59 759 121 HOH HOH . M 7 HOH A 60 760 151 HOH HOH . M 7 HOH A 61 761 100 HOH HOH . M 7 HOH A 62 762 143 HOH HOH . M 7 HOH A 63 763 52 HOH HOH . M 7 HOH A 64 764 167 HOH HOH . M 7 HOH A 65 765 94 HOH HOH . M 7 HOH A 66 766 86 HOH HOH . M 7 HOH A 67 767 91 HOH HOH . M 7 HOH A 68 768 311 HOH HOH . M 7 HOH A 69 769 300 HOH HOH . M 7 HOH A 70 770 92 HOH HOH . M 7 HOH A 71 771 82 HOH HOH . M 7 HOH A 72 772 15 HOH HOH . M 7 HOH A 73 773 83 HOH HOH . M 7 HOH A 74 774 265 HOH HOH . M 7 HOH A 75 775 59 HOH HOH . M 7 HOH A 76 776 194 HOH HOH . M 7 HOH A 77 777 84 HOH HOH . M 7 HOH A 78 778 122 HOH HOH . M 7 HOH A 79 779 261 HOH HOH . M 7 HOH A 80 780 6 HOH HOH . M 7 HOH A 81 781 175 HOH HOH . M 7 HOH A 82 782 190 HOH HOH . M 7 HOH A 83 783 88 HOH HOH . M 7 HOH A 84 784 163 HOH HOH . M 7 HOH A 85 785 139 HOH HOH . M 7 HOH A 86 786 54 HOH HOH . M 7 HOH A 87 787 21 HOH HOH . M 7 HOH A 88 788 153 HOH HOH . M 7 HOH A 89 789 237 HOH HOH . M 7 HOH A 90 790 197 HOH HOH . M 7 HOH A 91 791 127 HOH HOH . M 7 HOH A 92 792 187 HOH HOH . M 7 HOH A 93 793 181 HOH HOH . M 7 HOH A 94 794 66 HOH HOH . M 7 HOH A 95 795 69 HOH HOH . M 7 HOH A 96 796 217 HOH HOH . M 7 HOH A 97 797 114 HOH HOH . M 7 HOH A 98 798 119 HOH HOH . M 7 HOH A 99 799 302 HOH HOH . M 7 HOH A 100 800 279 HOH HOH . M 7 HOH A 101 801 211 HOH HOH . M 7 HOH A 102 802 317 HOH HOH . M 7 HOH A 103 803 258 HOH HOH . M 7 HOH A 104 804 107 HOH HOH . M 7 HOH A 105 805 234 HOH HOH . M 7 HOH A 106 806 242 HOH HOH . M 7 HOH A 107 807 29 HOH HOH . M 7 HOH A 108 808 301 HOH HOH . M 7 HOH A 109 809 240 HOH HOH . M 7 HOH A 110 810 244 HOH HOH . M 7 HOH A 111 811 156 HOH HOH . M 7 HOH A 112 812 53 HOH HOH . M 7 HOH A 113 813 255 HOH HOH . M 7 HOH A 114 814 132 HOH HOH . M 7 HOH A 115 815 195 HOH HOH . M 7 HOH A 116 816 30 HOH HOH . M 7 HOH A 117 817 130 HOH HOH . M 7 HOH A 118 818 183 HOH HOH . M 7 HOH A 119 819 123 HOH HOH . M 7 HOH A 120 820 219 HOH HOH . M 7 HOH A 121 821 328 HOH HOH . M 7 HOH A 122 822 268 HOH HOH . M 7 HOH A 123 823 186 HOH HOH . M 7 HOH A 124 824 262 HOH HOH . M 7 HOH A 125 825 222 HOH HOH . M 7 HOH A 126 826 207 HOH HOH . M 7 HOH A 127 827 254 HOH HOH . M 7 HOH A 128 828 203 HOH HOH . M 7 HOH A 129 829 257 HOH HOH . M 7 HOH A 130 830 269 HOH HOH . M 7 HOH A 131 831 212 HOH HOH . M 7 HOH A 132 832 309 HOH HOH . M 7 HOH A 133 833 271 HOH HOH . M 7 HOH A 134 834 270 HOH HOH . M 7 HOH A 135 835 200 HOH HOH . M 7 HOH A 136 836 215 HOH HOH . M 7 HOH A 137 837 201 HOH HOH . M 7 HOH A 138 838 267 HOH HOH . M 7 HOH A 139 839 259 HOH HOH . M 7 HOH A 140 840 174 HOH HOH . M 7 HOH A 141 841 249 HOH HOH . M 7 HOH A 142 842 266 HOH HOH . M 7 HOH A 143 843 76 HOH HOH . M 7 HOH A 144 844 205 HOH HOH . M 7 HOH A 145 845 210 HOH HOH . M 7 HOH A 146 846 318 HOH HOH . M 7 HOH A 147 847 272 HOH HOH . M 7 HOH A 148 848 251 HOH HOH . M 7 HOH A 149 849 316 HOH HOH . M 7 HOH A 150 850 202 HOH HOH . M 7 HOH A 151 851 239 HOH HOH . M 7 HOH A 152 852 315 HOH HOH . M 7 HOH A 153 853 198 HOH HOH . M 7 HOH A 154 854 329 HOH HOH . M 7 HOH A 155 855 260 HOH HOH . N 7 HOH B 1 701 14 HOH HOH . N 7 HOH B 2 702 26 HOH HOH . N 7 HOH B 3 703 283 HOH HOH . N 7 HOH B 4 704 50 HOH HOH . N 7 HOH B 5 705 150 HOH HOH . N 7 HOH B 6 706 325 HOH HOH . N 7 HOH B 7 707 20 HOH HOH . N 7 HOH B 8 708 231 HOH HOH . N 7 HOH B 9 709 105 HOH HOH . N 7 HOH B 10 710 35 HOH HOH . N 7 HOH B 11 711 34 HOH HOH . N 7 HOH B 12 712 56 HOH HOH . N 7 HOH B 13 713 125 HOH HOH . N 7 HOH B 14 714 173 HOH HOH . N 7 HOH B 15 715 157 HOH HOH . N 7 HOH B 16 716 192 HOH HOH . N 7 HOH B 17 717 230 HOH HOH . N 7 HOH B 18 718 45 HOH HOH . N 7 HOH B 19 719 124 HOH HOH . N 7 HOH B 20 720 64 HOH HOH . N 7 HOH B 21 721 111 HOH HOH . N 7 HOH B 22 722 85 HOH HOH . N 7 HOH B 23 723 17 HOH HOH . N 7 HOH B 24 724 182 HOH HOH . N 7 HOH B 25 725 162 HOH HOH . N 7 HOH B 26 726 16 HOH HOH . N 7 HOH B 27 727 109 HOH HOH . N 7 HOH B 28 728 101 HOH HOH . N 7 HOH B 29 729 140 HOH HOH . N 7 HOH B 30 730 33 HOH HOH . N 7 HOH B 31 731 12 HOH HOH . N 7 HOH B 32 732 141 HOH HOH . N 7 HOH B 33 733 3 HOH HOH . N 7 HOH B 34 734 32 HOH HOH . N 7 HOH B 35 735 102 HOH HOH . N 7 HOH B 36 736 189 HOH HOH . N 7 HOH B 37 737 290 HOH HOH . N 7 HOH B 38 738 280 HOH HOH . N 7 HOH B 39 739 278 HOH HOH . N 7 HOH B 40 740 13 HOH HOH . N 7 HOH B 41 741 178 HOH HOH . N 7 HOH B 42 742 110 HOH HOH . N 7 HOH B 43 743 41 HOH HOH . N 7 HOH B 44 744 11 HOH HOH . N 7 HOH B 45 745 135 HOH HOH . N 7 HOH B 46 746 145 HOH HOH . N 7 HOH B 47 747 297 HOH HOH . N 7 HOH B 48 748 75 HOH HOH . N 7 HOH B 49 749 19 HOH HOH . N 7 HOH B 50 750 292 HOH HOH . N 7 HOH B 51 751 134 HOH HOH . N 7 HOH B 52 752 118 HOH HOH . N 7 HOH B 53 753 232 HOH HOH . N 7 HOH B 54 754 131 HOH HOH . N 7 HOH B 55 755 116 HOH HOH . N 7 HOH B 56 756 233 HOH HOH . N 7 HOH B 57 757 137 HOH HOH . N 7 HOH B 58 758 274 HOH HOH . N 7 HOH B 59 759 170 HOH HOH . N 7 HOH B 60 760 191 HOH HOH . N 7 HOH B 61 761 23 HOH HOH . N 7 HOH B 62 762 179 HOH HOH . N 7 HOH B 63 763 287 HOH HOH . N 7 HOH B 64 764 95 HOH HOH . N 7 HOH B 65 765 138 HOH HOH . N 7 HOH B 66 766 104 HOH HOH . N 7 HOH B 67 767 304 HOH HOH . N 7 HOH B 68 768 308 HOH HOH . N 7 HOH B 69 769 38 HOH HOH . N 7 HOH B 70 770 28 HOH HOH . N 7 HOH B 71 771 103 HOH HOH . N 7 HOH B 72 772 154 HOH HOH . N 7 HOH B 73 773 144 HOH HOH . N 7 HOH B 74 774 77 HOH HOH . N 7 HOH B 75 775 293 HOH HOH . N 7 HOH B 76 776 108 HOH HOH . N 7 HOH B 77 777 307 HOH HOH . N 7 HOH B 78 778 319 HOH HOH . N 7 HOH B 79 779 305 HOH HOH . N 7 HOH B 80 780 49 HOH HOH . N 7 HOH B 81 781 224 HOH HOH . N 7 HOH B 82 782 321 HOH HOH . N 7 HOH B 83 783 147 HOH HOH . N 7 HOH B 84 784 264 HOH HOH . N 7 HOH B 85 785 324 HOH HOH . N 7 HOH B 86 786 306 HOH HOH . N 7 HOH B 87 787 323 HOH HOH . N 7 HOH B 88 788 188 HOH HOH . N 7 HOH B 89 789 282 HOH HOH . N 7 HOH B 90 790 296 HOH HOH . N 7 HOH B 91 791 250 HOH HOH . N 7 HOH B 92 792 285 HOH HOH . N 7 HOH B 93 793 221 HOH HOH . N 7 HOH B 94 794 142 HOH HOH . N 7 HOH B 95 795 220 HOH HOH . N 7 HOH B 96 796 295 HOH HOH . N 7 HOH B 97 797 298 HOH HOH . N 7 HOH B 98 798 277 HOH HOH . N 7 HOH B 99 799 226 HOH HOH . N 7 HOH B 100 800 291 HOH HOH . N 7 HOH B 101 801 74 HOH HOH . N 7 HOH B 102 802 214 HOH HOH . N 7 HOH B 103 803 281 HOH HOH . N 7 HOH B 104 804 228 HOH HOH . N 7 HOH B 105 805 327 HOH HOH . N 7 HOH B 106 806 326 HOH HOH . N 7 HOH B 107 807 273 HOH HOH . N 7 HOH B 108 808 229 HOH HOH . O 7 HOH F 1 701 243 HOH HOH . P 7 HOH G 1 701 288 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 6 7.82 4.276 -5.501 1 48.82 ? C1 EDO 603 A 1 HETATM 2 O O1 EDO . . . G 6 8.694 3.142 -5.463 1 50.49 ? O1 EDO 603 A 1 HETATM 3 C C2 EDO . . . G 6 8.463 5.408 -4.71 1 44.79 ? C2 EDO 603 A 1 HETATM 4 O O2 EDO . . . G 6 9.809 5.589 -5.171 1 50.96 ? O2 EDO 603 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #