data_4TVA # _model_server_result.job_id h-q_L5dSyZkiP9AVIqsrtA _model_server_result.datetime_utc '2024-11-27 00:52:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tva # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4TVA # _exptl.entry_id 4TVA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TVA _cell.length_a 173.475 _cell.length_b 173.475 _cell.length_c 138.492 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TVA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 237 n n N H PHE sing 238 n n N H2 PHE sing 239 n n CA C PHE sing 240 n n CA CB PHE sing 241 n n CA HA PHE sing 242 n n C O PHE doub 243 n n C OXT PHE sing 244 n n CB CG PHE sing 245 n n CB HB2 PHE sing 246 n n CB HB3 PHE sing 247 n n CG CD1 PHE doub 248 n y CG CD2 PHE sing 249 n y CD1 CE1 PHE sing 250 n y CD1 HD1 PHE sing 251 n n CD2 CE2 PHE doub 252 n y CD2 HD2 PHE sing 253 n n CE1 CZ PHE doub 254 n y CE1 HE1 PHE sing 255 n n CE2 CZ PHE sing 256 n y CE2 HE2 PHE sing 257 n n CZ HZ PHE sing 258 n n OXT HXT PHE sing 259 n n # _atom_sites.entry_id 4TVA _atom_sites.fract_transf_matrix[1][1] 0.005765 _atom_sites.fract_transf_matrix[1][2] 0.003328 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PHE A 1 401 1 PHE PHE . D 4 PUY B 1 801 1 PUY PUY . E 5 HOH A 1 501 118 HOH HOH . E 5 HOH A 2 502 29 HOH HOH . E 5 HOH A 3 503 165 HOH HOH . E 5 HOH A 4 504 116 HOH HOH . E 5 HOH A 5 505 81 HOH HOH . E 5 HOH A 6 506 2 HOH HOH . E 5 HOH A 7 507 9 HOH HOH . E 5 HOH A 8 508 15 HOH HOH . E 5 HOH A 9 509 22 HOH HOH . E 5 HOH A 10 510 35 HOH HOH . E 5 HOH A 11 511 37 HOH HOH . E 5 HOH A 12 512 43 HOH HOH . E 5 HOH A 13 513 48 HOH HOH . E 5 HOH A 14 514 49 HOH HOH . E 5 HOH A 15 515 56 HOH HOH . E 5 HOH A 16 516 62 HOH HOH . E 5 HOH A 17 517 66 HOH HOH . E 5 HOH A 18 518 68 HOH HOH . E 5 HOH A 19 519 69 HOH HOH . E 5 HOH A 20 520 76 HOH HOH . E 5 HOH A 21 521 78 HOH HOH . E 5 HOH A 22 522 91 HOH HOH . E 5 HOH A 23 523 107 HOH HOH . E 5 HOH A 24 524 126 HOH HOH . E 5 HOH A 25 525 131 HOH HOH . E 5 HOH A 26 526 148 HOH HOH . E 5 HOH A 27 527 149 HOH HOH . E 5 HOH A 28 528 153 HOH HOH . E 5 HOH A 29 529 172 HOH HOH . F 5 HOH B 1 901 127 HOH HOH . F 5 HOH B 2 902 88 HOH HOH . F 5 HOH B 3 903 67 HOH HOH . F 5 HOH B 4 904 168 HOH HOH . F 5 HOH B 5 905 175 HOH HOH . F 5 HOH B 6 906 47 HOH HOH . F 5 HOH B 7 907 70 HOH HOH . F 5 HOH B 8 908 141 HOH HOH . F 5 HOH B 9 909 24 HOH HOH . F 5 HOH B 10 910 51 HOH HOH . F 5 HOH B 11 911 6 HOH HOH . F 5 HOH B 12 912 169 HOH HOH . F 5 HOH B 13 913 18 HOH HOH . F 5 HOH B 14 914 106 HOH HOH . F 5 HOH B 15 915 38 HOH HOH . F 5 HOH B 16 916 93 HOH HOH . F 5 HOH B 17 917 60 HOH HOH . F 5 HOH B 18 918 162 HOH HOH . F 5 HOH B 19 919 146 HOH HOH . F 5 HOH B 20 920 114 HOH HOH . F 5 HOH B 21 921 142 HOH HOH . F 5 HOH B 22 922 144 HOH HOH . F 5 HOH B 23 923 161 HOH HOH . F 5 HOH B 24 924 110 HOH HOH . F 5 HOH B 25 925 1 HOH HOH . F 5 HOH B 26 926 3 HOH HOH . F 5 HOH B 27 927 4 HOH HOH . F 5 HOH B 28 928 5 HOH HOH . F 5 HOH B 29 929 7 HOH HOH . F 5 HOH B 30 930 8 HOH HOH . F 5 HOH B 31 931 10 HOH HOH . F 5 HOH B 32 932 11 HOH HOH . F 5 HOH B 33 933 12 HOH HOH . F 5 HOH B 34 934 13 HOH HOH . F 5 HOH B 35 935 14 HOH HOH . F 5 HOH B 36 936 16 HOH HOH . F 5 HOH B 37 937 17 HOH HOH . F 5 HOH B 38 938 19 HOH HOH . F 5 HOH B 39 939 20 HOH HOH . F 5 HOH B 40 940 21 HOH HOH . F 5 HOH B 41 941 23 HOH HOH . F 5 HOH B 42 942 25 HOH HOH . F 5 HOH B 43 943 26 HOH HOH . F 5 HOH B 44 944 27 HOH HOH . F 5 HOH B 45 945 28 HOH HOH . F 5 HOH B 46 946 30 HOH HOH . F 5 HOH B 47 947 31 HOH HOH . F 5 HOH B 48 948 32 HOH HOH . F 5 HOH B 49 949 33 HOH HOH . F 5 HOH B 50 950 34 HOH HOH . F 5 HOH B 51 951 36 HOH HOH . F 5 HOH B 52 952 39 HOH HOH . F 5 HOH B 53 953 40 HOH HOH . F 5 HOH B 54 954 41 HOH HOH . F 5 HOH B 55 955 42 HOH HOH . F 5 HOH B 56 956 44 HOH HOH . F 5 HOH B 57 957 45 HOH HOH . F 5 HOH B 58 958 46 HOH HOH . F 5 HOH B 59 959 50 HOH HOH . F 5 HOH B 60 960 52 HOH HOH . F 5 HOH B 61 961 53 HOH HOH . F 5 HOH B 62 962 54 HOH HOH . F 5 HOH B 63 963 55 HOH HOH . F 5 HOH B 64 964 57 HOH HOH . F 5 HOH B 65 965 58 HOH HOH . F 5 HOH B 66 966 59 HOH HOH . F 5 HOH B 67 967 61 HOH HOH . F 5 HOH B 68 968 63 HOH HOH . F 5 HOH B 69 969 64 HOH HOH . F 5 HOH B 70 970 65 HOH HOH . F 5 HOH B 71 971 71 HOH HOH . F 5 HOH B 72 972 72 HOH HOH . F 5 HOH B 73 973 73 HOH HOH . F 5 HOH B 74 974 74 HOH HOH . F 5 HOH B 75 975 75 HOH HOH . F 5 HOH B 76 976 77 HOH HOH . F 5 HOH B 77 977 79 HOH HOH . F 5 HOH B 78 978 80 HOH HOH . F 5 HOH B 79 979 82 HOH HOH . F 5 HOH B 80 980 83 HOH HOH . F 5 HOH B 81 981 84 HOH HOH . F 5 HOH B 82 982 85 HOH HOH . F 5 HOH B 83 983 86 HOH HOH . F 5 HOH B 84 984 87 HOH HOH . F 5 HOH B 85 985 89 HOH HOH . F 5 HOH B 86 986 90 HOH HOH . F 5 HOH B 87 987 92 HOH HOH . F 5 HOH B 88 988 94 HOH HOH . F 5 HOH B 89 989 95 HOH HOH . F 5 HOH B 90 990 96 HOH HOH . F 5 HOH B 91 991 97 HOH HOH . F 5 HOH B 92 992 98 HOH HOH . F 5 HOH B 93 993 99 HOH HOH . F 5 HOH B 94 994 100 HOH HOH . F 5 HOH B 95 995 101 HOH HOH . F 5 HOH B 96 996 102 HOH HOH . F 5 HOH B 97 997 103 HOH HOH . F 5 HOH B 98 998 104 HOH HOH . F 5 HOH B 99 999 105 HOH HOH . F 5 HOH B 100 1000 108 HOH HOH . F 5 HOH B 101 1001 109 HOH HOH . F 5 HOH B 102 1002 111 HOH HOH . F 5 HOH B 103 1003 112 HOH HOH . F 5 HOH B 104 1004 113 HOH HOH . F 5 HOH B 105 1005 115 HOH HOH . F 5 HOH B 106 1006 117 HOH HOH . F 5 HOH B 107 1007 119 HOH HOH . F 5 HOH B 108 1008 120 HOH HOH . F 5 HOH B 109 1009 121 HOH HOH . F 5 HOH B 110 1010 122 HOH HOH . F 5 HOH B 111 1011 123 HOH HOH . F 5 HOH B 112 1012 124 HOH HOH . F 5 HOH B 113 1013 125 HOH HOH . F 5 HOH B 114 1014 128 HOH HOH . F 5 HOH B 115 1015 129 HOH HOH . F 5 HOH B 116 1016 130 HOH HOH . F 5 HOH B 117 1017 132 HOH HOH . F 5 HOH B 118 1018 133 HOH HOH . F 5 HOH B 119 1019 134 HOH HOH . F 5 HOH B 120 1020 135 HOH HOH . F 5 HOH B 121 1021 136 HOH HOH . F 5 HOH B 122 1022 137 HOH HOH . F 5 HOH B 123 1023 138 HOH HOH . F 5 HOH B 124 1024 139 HOH HOH . F 5 HOH B 125 1025 140 HOH HOH . F 5 HOH B 126 1026 143 HOH HOH . F 5 HOH B 127 1027 145 HOH HOH . F 5 HOH B 128 1028 147 HOH HOH . F 5 HOH B 129 1029 150 HOH HOH . F 5 HOH B 130 1030 151 HOH HOH . F 5 HOH B 131 1031 152 HOH HOH . F 5 HOH B 132 1032 154 HOH HOH . F 5 HOH B 133 1033 155 HOH HOH . F 5 HOH B 134 1034 156 HOH HOH . F 5 HOH B 135 1035 157 HOH HOH . F 5 HOH B 136 1036 158 HOH HOH . F 5 HOH B 137 1037 159 HOH HOH . F 5 HOH B 138 1038 160 HOH HOH . F 5 HOH B 139 1039 163 HOH HOH . F 5 HOH B 140 1040 164 HOH HOH . F 5 HOH B 141 1041 166 HOH HOH . F 5 HOH B 142 1042 167 HOH HOH . F 5 HOH B 143 1043 170 HOH HOH . F 5 HOH B 144 1044 171 HOH HOH . F 5 HOH B 145 1045 173 HOH HOH . F 5 HOH B 146 1046 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . C 3 19.889 62.415 19.458 1 65.68 ? N PHE 401 A 1 HETATM 2 C CA PHE . . . C 3 19.034 63.483 18.849 1 65.88 ? CA PHE 401 A 1 HETATM 3 C C PHE . . . C 3 17.539 63.245 19.04 1 67.01 ? C PHE 401 A 1 HETATM 4 O O PHE . . . C 3 16.761 64.069 18.497 1 68.21 ? O PHE 401 A 1 HETATM 5 C CB PHE . . . C 3 19.332 63.628 17.344 1 63.79 ? CB PHE 401 A 1 HETATM 6 C CG PHE . . . C 3 20.635 64.306 17.062 1 61.3 ? CG PHE 401 A 1 HETATM 7 C CD1 PHE . . . C 3 21.804 63.562 16.916 1 59.71 ? CD1 PHE 401 A 1 HETATM 8 C CD2 PHE . . . C 3 20.71 65.7 17.037 1 59.25 ? CD2 PHE 401 A 1 HETATM 9 C CE1 PHE . . . C 3 23.036 64.193 16.758 1 59.54 ? CE1 PHE 401 A 1 HETATM 10 C CE2 PHE . . . C 3 21.931 66.342 16.88 1 59.26 ? CE2 PHE 401 A 1 HETATM 11 C CZ PHE . . . C 3 23.102 65.589 16.74 1 59.7 ? CZ PHE 401 A 1 HETATM 12 O OXT PHE . . . C 3 17.167 62.251 19.716 1 66.97 ? OXT PHE 401 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #