data_4TVG
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_model_server_result.job_id            xc11oR2NzIc1pE48Yx4bCA 
_model_server_result.datetime_utc      '2024-11-13 17:35:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tvg 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":101}' 
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_entry.id    4TVG 
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_exptl.entry_id    4TVG 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4TVG 
_cell.length_a            28.548 
_cell.length_b            65.273 
_cell.length_c            91.503 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 4TVG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
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_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4TVG 
_atom_sites.fract_transf_matrix[1][1]    0.035029 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010929 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 K97 A 1 101 4 K97 K97 . 
E 4 GOL B 1 101 1 GOL GOL . 
F 5 HOH A 1 201 30 HOH HOH . 
F 5 HOH A 2 202 11 HOH HOH . 
F 5 HOH A 3 203 9 HOH HOH . 
F 5 HOH A 4 204 39 HOH HOH . 
F 5 HOH A 5 205 32 HOH HOH . 
F 5 HOH A 6 206 28 HOH HOH . 
F 5 HOH A 7 207 13 HOH HOH . 
F 5 HOH A 8 208 35 HOH HOH . 
F 5 HOH A 9 209 49 HOH HOH . 
F 5 HOH A 10 210 12 HOH HOH . 
F 5 HOH A 11 211 8 HOH HOH . 
F 5 HOH A 12 212 15 HOH HOH . 
F 5 HOH A 13 213 18 HOH HOH . 
F 5 HOH A 14 214 19 HOH HOH . 
F 5 HOH A 15 215 20 HOH HOH . 
F 5 HOH A 16 216 21 HOH HOH . 
F 5 HOH A 17 217 22 HOH HOH . 
F 5 HOH A 18 218 26 HOH HOH . 
F 5 HOH A 19 219 44 HOH HOH . 
F 5 HOH A 20 220 47 HOH HOH . 
F 5 HOH A 21 221 50 HOH HOH . 
F 5 HOH A 22 222 51 HOH HOH . 
G 5 HOH B 1 201 2 HOH HOH . 
G 5 HOH B 2 202 31 HOH HOH . 
G 5 HOH B 3 203 17 HOH HOH . 
G 5 HOH B 4 204 6 HOH HOH . 
G 5 HOH B 5 205 36 HOH HOH . 
G 5 HOH B 6 206 37 HOH HOH . 
G 5 HOH B 7 207 29 HOH HOH . 
G 5 HOH B 8 208 38 HOH HOH . 
G 5 HOH B 9 209 16 HOH HOH . 
G 5 HOH B 10 210 45 HOH HOH . 
G 5 HOH B 11 211 14 HOH HOH . 
G 5 HOH B 12 212 46 HOH HOH . 
G 5 HOH B 13 213 48 HOH HOH . 
G 5 HOH B 14 214 5 HOH HOH . 
G 5 HOH B 15 215 3 HOH HOH . 
G 5 HOH B 16 216 7 HOH HOH . 
G 5 HOH B 17 217 10 HOH HOH . 
G 5 HOH B 18 218 23 HOH HOH . 
G 5 HOH B 19 219 24 HOH HOH . 
G 5 HOH B 20 220 27 HOH HOH . 
G 5 HOH B 21 221 34 HOH HOH . 
G 5 HOH B 22 222 40 HOH HOH . 
G 5 HOH B 23 223 41 HOH HOH . 
G 5 HOH B 24 224 42 HOH HOH . 
G 5 HOH B 25 225 43 HOH HOH . 
H 5 HOH C 1 101 25 HOH HOH . 
H 5 HOH C 2 102 33 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -6.78 16.066 7.966 1 43.6 ? C1 GOL 101 B 1 
HETATM 2 O O1 GOL . . . E 4 -7.856 17.009 7.792 1 44.27 ? O1 GOL 101 B 1 
HETATM 3 C C2 GOL . . . E 4 -5.465 16.748 7.608 1 42.58 ? C2 GOL 101 B 1 
HETATM 4 O O2 GOL . . . E 4 -4.737 17.058 8.794 1 39.4 ? O2 GOL 101 B 1 
HETATM 5 C C3 GOL . . . E 4 -4.609 15.889 6.694 1 46.55 ? C3 GOL 101 B 1 
HETATM 6 O O3 GOL . . . E 4 -3.601 16.723 6.082 1 50.07 ? O3 GOL 101 B 1 
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_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
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