data_4TVJ
#
_model_server_result.job_id            4oufCTg3HO1t0tVfbU5xvQ 
_model_server_result.datetime_utc      '2024-10-18 16:26:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tvj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":603}' 
#
_entry.id    4TVJ 
#
_exptl.entry_id    4TVJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.96 
_cell.angle_gamma         90 
_cell.entry_id            4TVJ 
_cell.length_a            58.083 
_cell.length_b            134.123 
_cell.length_c            58.348 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TVJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? Monomeric 1 author_and_software_defined_assembly 1 
? Monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 188 n n 
C1 C2 GOL sing 189 n n 
C1 H11 GOL sing 190 n n 
C1 H12 GOL sing 191 n n 
O1 HO1 GOL sing 192 n n 
C2 O2 GOL sing 193 n n 
C2 C3 GOL sing 194 n n 
C2 H2 GOL sing 195 n n 
O2 HO2 GOL sing 196 n n 
C3 O3 GOL sing 197 n n 
C3 H31 GOL sing 198 n n 
C3 H32 GOL sing 199 n n 
O3 HO3 GOL sing 200 n n 
#
_atom_sites.entry_id                     4TVJ 
_atom_sites.fract_transf_matrix[1][1]    0.017217 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00914 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007456 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019404 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 09L A 1 601 1 09L 09L . 
D 3 GOL A 1 602 1 GOL GOL . 
E 3 GOL A 1 603 3 GOL GOL . 
F 2 09L B 1 601 2 09L 09L . 
G 3 GOL B 1 602 2 GOL GOL . 
H 4 HOH A 1 701 19 HOH HOH . 
H 4 HOH A 2 702 179 HOH HOH . 
H 4 HOH A 3 703 97 HOH HOH . 
H 4 HOH A 4 704 182 HOH HOH . 
H 4 HOH A 5 705 260 HOH HOH . 
H 4 HOH A 6 706 64 HOH HOH . 
H 4 HOH A 7 707 103 HOH HOH . 
H 4 HOH A 8 708 77 HOH HOH . 
H 4 HOH A 9 709 198 HOH HOH . 
H 4 HOH A 10 710 118 HOH HOH . 
H 4 HOH A 11 711 174 HOH HOH . 
H 4 HOH A 12 712 84 HOH HOH . 
H 4 HOH A 13 713 15 HOH HOH . 
H 4 HOH A 14 714 207 HOH HOH . 
H 4 HOH A 15 715 214 HOH HOH . 
H 4 HOH A 16 716 49 HOH HOH . 
H 4 HOH A 17 717 185 HOH HOH . 
H 4 HOH A 18 718 240 HOH HOH . 
H 4 HOH A 19 719 204 HOH HOH . 
H 4 HOH A 20 720 250 HOH HOH . 
H 4 HOH A 21 721 244 HOH HOH . 
H 4 HOH A 22 722 1 HOH HOH . 
H 4 HOH A 23 723 5 HOH HOH . 
H 4 HOH A 24 724 6 HOH HOH . 
H 4 HOH A 25 725 7 HOH HOH . 
H 4 HOH A 26 726 8 HOH HOH . 
H 4 HOH A 27 727 9 HOH HOH . 
H 4 HOH A 28 728 10 HOH HOH . 
H 4 HOH A 29 729 11 HOH HOH . 
H 4 HOH A 30 730 12 HOH HOH . 
H 4 HOH A 31 731 17 HOH HOH . 
H 4 HOH A 32 732 24 HOH HOH . 
H 4 HOH A 33 733 25 HOH HOH . 
H 4 HOH A 34 734 26 HOH HOH . 
H 4 HOH A 35 735 28 HOH HOH . 
H 4 HOH A 36 736 31 HOH HOH . 
H 4 HOH A 37 737 35 HOH HOH . 
H 4 HOH A 38 738 36 HOH HOH . 
H 4 HOH A 39 739 39 HOH HOH . 
H 4 HOH A 40 740 42 HOH HOH . 
H 4 HOH A 41 741 44 HOH HOH . 
H 4 HOH A 42 742 45 HOH HOH . 
H 4 HOH A 43 743 46 HOH HOH . 
H 4 HOH A 44 744 47 HOH HOH . 
H 4 HOH A 45 745 48 HOH HOH . 
H 4 HOH A 46 746 51 HOH HOH . 
H 4 HOH A 47 747 52 HOH HOH . 
H 4 HOH A 48 748 54 HOH HOH . 
H 4 HOH A 49 749 55 HOH HOH . 
H 4 HOH A 50 750 56 HOH HOH . 
H 4 HOH A 51 751 57 HOH HOH . 
H 4 HOH A 52 752 58 HOH HOH . 
H 4 HOH A 53 753 59 HOH HOH . 
H 4 HOH A 54 754 61 HOH HOH . 
H 4 HOH A 55 755 63 HOH HOH . 
H 4 HOH A 56 756 66 HOH HOH . 
H 4 HOH A 57 757 68 HOH HOH . 
H 4 HOH A 58 758 70 HOH HOH . 
H 4 HOH A 59 759 71 HOH HOH . 
H 4 HOH A 60 760 72 HOH HOH . 
H 4 HOH A 61 761 73 HOH HOH . 
H 4 HOH A 62 762 75 HOH HOH . 
H 4 HOH A 63 763 76 HOH HOH . 
H 4 HOH A 64 764 78 HOH HOH . 
H 4 HOH A 65 765 81 HOH HOH . 
H 4 HOH A 66 766 82 HOH HOH . 
H 4 HOH A 67 767 83 HOH HOH . 
H 4 HOH A 68 768 86 HOH HOH . 
H 4 HOH A 69 769 87 HOH HOH . 
H 4 HOH A 70 770 89 HOH HOH . 
H 4 HOH A 71 771 90 HOH HOH . 
H 4 HOH A 72 772 91 HOH HOH . 
H 4 HOH A 73 773 93 HOH HOH . 
H 4 HOH A 74 774 94 HOH HOH . 
H 4 HOH A 75 775 98 HOH HOH . 
H 4 HOH A 76 776 99 HOH HOH . 
H 4 HOH A 77 777 101 HOH HOH . 
H 4 HOH A 78 778 105 HOH HOH . 
H 4 HOH A 79 779 106 HOH HOH . 
H 4 HOH A 80 780 107 HOH HOH . 
H 4 HOH A 81 781 108 HOH HOH . 
H 4 HOH A 82 782 110 HOH HOH . 
H 4 HOH A 83 783 111 HOH HOH . 
H 4 HOH A 84 784 112 HOH HOH . 
H 4 HOH A 85 785 113 HOH HOH . 
H 4 HOH A 86 786 114 HOH HOH . 
H 4 HOH A 87 787 119 HOH HOH . 
H 4 HOH A 88 788 120 HOH HOH . 
H 4 HOH A 89 789 122 HOH HOH . 
H 4 HOH A 90 790 126 HOH HOH . 
H 4 HOH A 91 791 127 HOH HOH . 
H 4 HOH A 92 792 130 HOH HOH . 
H 4 HOH A 93 793 132 HOH HOH . 
H 4 HOH A 94 794 133 HOH HOH . 
H 4 HOH A 95 795 134 HOH HOH . 
H 4 HOH A 96 796 135 HOH HOH . 
H 4 HOH A 97 797 137 HOH HOH . 
H 4 HOH A 98 798 140 HOH HOH . 
H 4 HOH A 99 799 141 HOH HOH . 
H 4 HOH A 100 800 145 HOH HOH . 
H 4 HOH A 101 801 151 HOH HOH . 
H 4 HOH A 102 802 155 HOH HOH . 
H 4 HOH A 103 803 156 HOH HOH . 
H 4 HOH A 104 804 157 HOH HOH . 
H 4 HOH A 105 805 158 HOH HOH . 
H 4 HOH A 106 806 160 HOH HOH . 
H 4 HOH A 107 807 161 HOH HOH . 
H 4 HOH A 108 808 162 HOH HOH . 
H 4 HOH A 109 809 163 HOH HOH . 
H 4 HOH A 110 810 164 HOH HOH . 
H 4 HOH A 111 811 165 HOH HOH . 
H 4 HOH A 112 812 166 HOH HOH . 
H 4 HOH A 113 813 167 HOH HOH . 
H 4 HOH A 114 814 172 HOH HOH . 
H 4 HOH A 115 815 176 HOH HOH . 
H 4 HOH A 116 816 178 HOH HOH . 
H 4 HOH A 117 817 180 HOH HOH . 
H 4 HOH A 118 818 183 HOH HOH . 
H 4 HOH A 119 819 184 HOH HOH . 
H 4 HOH A 120 820 187 HOH HOH . 
H 4 HOH A 121 821 188 HOH HOH . 
H 4 HOH A 122 822 189 HOH HOH . 
H 4 HOH A 123 823 190 HOH HOH . 
H 4 HOH A 124 824 191 HOH HOH . 
H 4 HOH A 125 825 193 HOH HOH . 
H 4 HOH A 126 826 194 HOH HOH . 
H 4 HOH A 127 827 195 HOH HOH . 
H 4 HOH A 128 828 196 HOH HOH . 
H 4 HOH A 129 829 197 HOH HOH . 
H 4 HOH A 130 830 201 HOH HOH . 
H 4 HOH A 131 831 206 HOH HOH . 
H 4 HOH A 132 832 209 HOH HOH . 
H 4 HOH A 133 833 210 HOH HOH . 
H 4 HOH A 134 834 213 HOH HOH . 
H 4 HOH A 135 835 217 HOH HOH . 
H 4 HOH A 136 836 220 HOH HOH . 
H 4 HOH A 137 837 222 HOH HOH . 
H 4 HOH A 138 838 223 HOH HOH . 
H 4 HOH A 139 839 225 HOH HOH . 
H 4 HOH A 140 840 228 HOH HOH . 
H 4 HOH A 141 841 231 HOH HOH . 
H 4 HOH A 142 842 232 HOH HOH . 
H 4 HOH A 143 843 235 HOH HOH . 
H 4 HOH A 144 844 238 HOH HOH . 
H 4 HOH A 145 845 239 HOH HOH . 
H 4 HOH A 146 846 243 HOH HOH . 
H 4 HOH A 147 847 245 HOH HOH . 
H 4 HOH A 148 848 247 HOH HOH . 
H 4 HOH A 149 849 248 HOH HOH . 
H 4 HOH A 150 850 252 HOH HOH . 
H 4 HOH A 151 851 253 HOH HOH . 
H 4 HOH A 152 852 256 HOH HOH . 
H 4 HOH A 153 853 257 HOH HOH . 
H 4 HOH A 154 854 258 HOH HOH . 
H 4 HOH A 155 855 259 HOH HOH . 
H 4 HOH A 156 856 261 HOH HOH . 
H 4 HOH A 157 857 263 HOH HOH . 
H 4 HOH A 158 858 265 HOH HOH . 
H 4 HOH A 159 859 266 HOH HOH . 
H 4 HOH A 160 860 267 HOH HOH . 
I 4 HOH B 1 701 146 HOH HOH . 
I 4 HOH B 2 702 43 HOH HOH . 
I 4 HOH B 3 703 255 HOH HOH . 
I 4 HOH B 4 704 236 HOH HOH . 
I 4 HOH B 5 705 50 HOH HOH . 
I 4 HOH B 6 706 14 HOH HOH . 
I 4 HOH B 7 707 203 HOH HOH . 
I 4 HOH B 8 708 30 HOH HOH . 
I 4 HOH B 9 709 229 HOH HOH . 
I 4 HOH B 10 710 234 HOH HOH . 
I 4 HOH B 11 711 27 HOH HOH . 
I 4 HOH B 12 712 230 HOH HOH . 
I 4 HOH B 13 713 100 HOH HOH . 
I 4 HOH B 14 714 2 HOH HOH . 
I 4 HOH B 15 715 3 HOH HOH . 
I 4 HOH B 16 716 4 HOH HOH . 
I 4 HOH B 17 717 13 HOH HOH . 
I 4 HOH B 18 718 16 HOH HOH . 
I 4 HOH B 19 719 18 HOH HOH . 
I 4 HOH B 20 720 20 HOH HOH . 
I 4 HOH B 21 721 21 HOH HOH . 
I 4 HOH B 22 722 22 HOH HOH . 
I 4 HOH B 23 723 23 HOH HOH . 
I 4 HOH B 24 724 29 HOH HOH . 
I 4 HOH B 25 725 32 HOH HOH . 
I 4 HOH B 26 726 33 HOH HOH . 
I 4 HOH B 27 727 34 HOH HOH . 
I 4 HOH B 28 728 37 HOH HOH . 
I 4 HOH B 29 729 38 HOH HOH . 
I 4 HOH B 30 730 40 HOH HOH . 
I 4 HOH B 31 731 41 HOH HOH . 
I 4 HOH B 32 732 53 HOH HOH . 
I 4 HOH B 33 733 60 HOH HOH . 
I 4 HOH B 34 734 62 HOH HOH . 
I 4 HOH B 35 735 65 HOH HOH . 
I 4 HOH B 36 736 67 HOH HOH . 
I 4 HOH B 37 737 69 HOH HOH . 
I 4 HOH B 38 738 74 HOH HOH . 
I 4 HOH B 39 739 79 HOH HOH . 
I 4 HOH B 40 740 80 HOH HOH . 
I 4 HOH B 41 741 85 HOH HOH . 
I 4 HOH B 42 742 88 HOH HOH . 
I 4 HOH B 43 743 92 HOH HOH . 
I 4 HOH B 44 744 95 HOH HOH . 
I 4 HOH B 45 745 96 HOH HOH . 
I 4 HOH B 46 746 102 HOH HOH . 
I 4 HOH B 47 747 104 HOH HOH . 
I 4 HOH B 48 748 109 HOH HOH . 
I 4 HOH B 49 749 115 HOH HOH . 
I 4 HOH B 50 750 116 HOH HOH . 
I 4 HOH B 51 751 117 HOH HOH . 
I 4 HOH B 52 752 121 HOH HOH . 
I 4 HOH B 53 753 123 HOH HOH . 
I 4 HOH B 54 754 124 HOH HOH . 
I 4 HOH B 55 755 125 HOH HOH . 
I 4 HOH B 56 756 128 HOH HOH . 
I 4 HOH B 57 757 129 HOH HOH . 
I 4 HOH B 58 758 131 HOH HOH . 
I 4 HOH B 59 759 136 HOH HOH . 
I 4 HOH B 60 760 138 HOH HOH . 
I 4 HOH B 61 761 139 HOH HOH . 
I 4 HOH B 62 762 142 HOH HOH . 
I 4 HOH B 63 763 143 HOH HOH . 
I 4 HOH B 64 764 144 HOH HOH . 
I 4 HOH B 65 765 147 HOH HOH . 
I 4 HOH B 66 766 148 HOH HOH . 
I 4 HOH B 67 767 149 HOH HOH . 
I 4 HOH B 68 768 150 HOH HOH . 
I 4 HOH B 69 769 152 HOH HOH . 
I 4 HOH B 70 770 153 HOH HOH . 
I 4 HOH B 71 771 154 HOH HOH . 
I 4 HOH B 72 772 159 HOH HOH . 
I 4 HOH B 73 773 168 HOH HOH . 
I 4 HOH B 74 774 169 HOH HOH . 
I 4 HOH B 75 775 170 HOH HOH . 
I 4 HOH B 76 776 171 HOH HOH . 
I 4 HOH B 77 777 173 HOH HOH . 
I 4 HOH B 78 778 175 HOH HOH . 
I 4 HOH B 79 779 177 HOH HOH . 
I 4 HOH B 80 780 181 HOH HOH . 
I 4 HOH B 81 781 186 HOH HOH . 
I 4 HOH B 82 782 192 HOH HOH . 
I 4 HOH B 83 783 199 HOH HOH . 
I 4 HOH B 84 784 200 HOH HOH . 
I 4 HOH B 85 785 202 HOH HOH . 
I 4 HOH B 86 786 205 HOH HOH . 
I 4 HOH B 87 787 208 HOH HOH . 
I 4 HOH B 88 788 211 HOH HOH . 
I 4 HOH B 89 789 212 HOH HOH . 
I 4 HOH B 90 790 215 HOH HOH . 
I 4 HOH B 91 791 216 HOH HOH . 
I 4 HOH B 92 792 218 HOH HOH . 
I 4 HOH B 93 793 219 HOH HOH . 
I 4 HOH B 94 794 221 HOH HOH . 
I 4 HOH B 95 795 224 HOH HOH . 
I 4 HOH B 96 796 226 HOH HOH . 
I 4 HOH B 97 797 227 HOH HOH . 
I 4 HOH B 98 798 233 HOH HOH . 
I 4 HOH B 99 799 237 HOH HOH . 
I 4 HOH B 100 800 241 HOH HOH . 
I 4 HOH B 101 801 242 HOH HOH . 
I 4 HOH B 102 802 246 HOH HOH . 
I 4 HOH B 103 803 249 HOH HOH . 
I 4 HOH B 104 804 251 HOH HOH . 
I 4 HOH B 105 805 254 HOH HOH . 
I 4 HOH B 106 806 262 HOH HOH . 
I 4 HOH B 107 807 264 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 21.587 -1.279 13.046 1 30.27 ? C1 GOL 603 A 1 
HETATM 2 O O1 GOL . . . E 3 21.224 -2.325 13.906 1 26.62 ? O1 GOL 603 A 1 
HETATM 3 C C2 GOL . . . E 3 22.825 -0.559 13.571 1 30.75 ? C2 GOL 603 A 1 
HETATM 4 O O2 GOL . . . E 3 22.588 0.842 13.785 1 32.68 ? O2 GOL 603 A 1 
HETATM 5 C C3 GOL . . . E 3 23.915 -0.792 12.555 1 31.35 ? C3 GOL 603 A 1 
HETATM 6 O O3 GOL . . . E 3 24.953 0.128 12.727 1 31.85 ? O3 GOL 603 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#