data_4TVX # _model_server_result.job_id uxFjT3ZQNpmEo9_MllOngw _model_server_result.datetime_utc '2024-12-27 03:48:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tvx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":601}' # _entry.id 4TVX # _exptl.entry_id 4TVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TVX _cell.length_a 200.851 _cell.length_b 214.541 _cell.length_c 217.383 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dodecameric 12 author_defined_assembly 1 ? dodecameric 12 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,M,N,O,P,Q,R,S,T,V,W,Y 1 1 C,D,E,F,G,H,I,J,K,L,U,X,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 Y N N ? 7 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 W SG CYS 140 U CYS 140 1_555 W SG CYS 250 U CYS 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? disulf ? disulf2 W SG CYS 143 U CYS 143 1_555 W SG CYS 250 U CYS 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? covale ? covale1 U O3' G 60 L G 60 1_555 U P 23G 61 L 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale2 V O3' G 60 X G 60 1_555 V P 23G 61 X 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.602 ? metalc ? metalc1 W SG CYS 140 U CYS 140 1_555 Y ZN ZN . U ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc2 W SG CYS 143 U CYS 143 1_555 Y ZN ZN . U ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc3 W N CYS 253 U CYS 253 1_555 Y ZN ZN . U ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 W SG CYS 253 U CYS 253 1_555 Y ZN ZN . U ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc5 X SG CYS 140 I CYS 140 1_555 Z ZN ZN . I ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc6 X SG CYS 143 I CYS 143 1_555 Z ZN ZN . I ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc7 X SG CYS 250 I CYS 250 1_555 Z ZN ZN . I ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc8 X SG CYS 253 I CYS 253 1_555 Z ZN ZN . I ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? hydrog WATSON-CRICK hydrog1 U N3 C 46 L C 46 1_555 U N1 23G 61 L 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 U N4 C 46 L C 46 1_555 U O6 23G 61 L 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 U O2 C 46 L C 46 1_555 U N2 23G 61 L 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 U N3 C 47 L C 47 1_555 U N1 G 60 L G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 U N4 C 47 L C 47 1_555 U O6 G 60 L G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 U O2 C 47 L C 47 1_555 U N2 G 60 L G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-G PAIR' hydrog7 U N4 C 48 L C 48 1_555 U O6 G 59 L G 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 U N3 C 49 L C 49 1_555 U N1 G 58 L G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 U N4 C 49 L C 49 1_555 U O6 G 58 L G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 U O2 C 49 L C 49 1_555 U N2 G 58 L G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'G-C PAIR' hydrog11 U N1 G 50 L G 50 1_555 U N3 C 57 L C 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 U N3 C 51 L C 51 1_555 U N1 G 56 L G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 U N4 C 51 L C 51 1_555 U O6 G 56 L G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 U O2 C 51 L C 51 1_555 U N2 G 56 L G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'G-A MISPAIR' hydrog15 U O6 G 52 L G 52 1_555 U N6 A 55 L A 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 V N3 C 46 X C 46 1_555 V N1 23G 61 X 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 V N4 C 46 X C 46 1_555 V O6 23G 61 X 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 V O2 C 46 X C 46 1_555 V N2 23G 61 X 23G 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 V N3 C 47 X C 47 1_555 V N1 G 60 X G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 V N4 C 47 X C 47 1_555 V O6 G 60 X G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 V O2 C 47 X C 47 1_555 V N2 G 60 X G 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 V N3 C 48 X C 48 1_555 V N1 G 59 X G 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 V N4 C 48 X C 48 1_555 V O6 G 59 X G 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 V O2 C 48 X C 48 1_555 V N2 G 59 X G 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 V N3 C 49 X C 49 1_555 V N1 G 58 X G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 V N4 C 49 X C 49 1_555 V O6 G 58 X G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 V O2 C 49 X C 49 1_555 V N2 G 58 X G 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 V N1 G 50 X G 50 1_555 V N3 C 57 X C 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 V N2 G 50 X G 50 1_555 V O2 C 57 X C 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 V O6 G 50 X G 50 1_555 V N4 C 57 X C 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 V N3 C 51 X C 51 1_555 V N1 G 56 X G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 V N4 C 51 X C 51 1_555 V O6 G 56 X G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 V O2 C 51 X C 51 1_555 V N2 G 56 X G 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4TVX _atom_sites.fract_transf_matrix[1][1] 0.004979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Y 7 ZN U 1 601 503 ZN ZN . Z 7 ZN I 1 601 503 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Z _atom_site.label_entity_id 7 _atom_site.Cartn_x 38.081 _atom_site.Cartn_y -82.37 _atom_site.Cartn_z 27.904 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 181.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id I _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 133 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 134 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #