data_4TVY # _model_server_result.job_id 6AhTCgOa54PgBYMKnoO1gw _model_server_result.datetime_utc '2025-01-02 17:44:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tvy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4TVY # _exptl.entry_id 4TVY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.336 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(3,7-dihydroxy-10H-phenoxazin-2-yl)pentanamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TVY _cell.length_a 79.117 _cell.length_b 89.951 _cell.length_c 108.89 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TVY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C17 H18 N2 O4' _chem_comp.formula_weight 314.336 _chem_comp.id 37R _chem_comp.mon_nstd_flag . _chem_comp.name 5-(3,7-dihydroxy-10H-phenoxazin-2-yl)pentanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O16 C12 37R sing 1 n n C17 C12 37R doub 2 n y C17 C8 37R sing 3 n y C12 C13 37R sing 4 n y O7 C8 37R sing 5 n n O7 C6 37R sing 6 n n C8 C9 37R doub 7 n y C1 C6 37R doub 8 n y C1 C2 37R sing 9 n y C6 C11 37R sing 10 n y C13 C15 37R sing 11 n n C13 C14 37R doub 12 n y O15 C2 37R sing 13 n n C2 C3 37R doub 14 n y C9 C14 37R sing 15 n y C9 N10 37R sing 16 n n C15 C16 37R sing 17 n n C16 C42 37R sing 18 n n C11 N10 37R sing 19 n n C11 C4 37R doub 20 n y C3 C4 37R sing 21 n y C42 C43 37R sing 22 n n C43 C44 37R sing 23 n n C44 O46 37R doub 24 n n C44 N45 37R sing 25 n n O15 H2 37R sing 26 n n C1 H1 37R sing 27 n n C17 H17 37R sing 28 n n O16 HO16 37R sing 29 n n C3 H3 37R sing 30 n n C4 H4 37R sing 31 n n N10 H5 37R sing 32 n n C14 H14 37R sing 33 n n C15 H152 37R sing 34 n n C15 H151 37R sing 35 n n C16 H161 37R sing 36 n n C16 H162 37R sing 37 n n C42 H422 37R sing 38 n n C42 H421 37R sing 39 n n C43 H432 37R sing 40 n n C43 H431 37R sing 41 n n N45 H451 37R sing 42 n n N45 H452 37R sing 43 n n # _atom_sites.entry_id 4TVY _atom_sites.fract_transf_matrix[1][1] 0.01264 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 37R A 1 401 1 37R Ram . D 2 37R A 1 402 1 37R RFb . E 2 37R B 1 401 1 37R RFb . F 2 37R B 1 402 1 37R Ram . G 3 HOH A 1 501 45 HOH HOH . G 3 HOH A 2 502 17 HOH HOH . G 3 HOH A 3 503 163 HOH HOH . G 3 HOH A 4 504 110 HOH HOH . G 3 HOH A 5 505 144 HOH HOH . G 3 HOH A 6 506 103 HOH HOH . G 3 HOH A 7 507 162 HOH HOH . G 3 HOH A 8 508 127 HOH HOH . G 3 HOH A 9 509 100 HOH HOH . G 3 HOH A 10 510 69 HOH HOH . G 3 HOH A 11 511 168 HOH HOH . G 3 HOH A 12 512 52 HOH HOH . G 3 HOH A 13 513 148 HOH HOH . G 3 HOH A 14 514 166 HOH HOH . G 3 HOH A 15 515 2 HOH HOH . G 3 HOH A 16 516 4 HOH HOH . G 3 HOH A 17 517 5 HOH HOH . G 3 HOH A 18 518 8 HOH HOH . G 3 HOH A 19 519 9 HOH HOH . G 3 HOH A 20 520 10 HOH HOH . G 3 HOH A 21 521 11 HOH HOH . G 3 HOH A 22 522 13 HOH HOH . G 3 HOH A 23 523 15 HOH HOH . G 3 HOH A 24 524 18 HOH HOH . G 3 HOH A 25 525 19 HOH HOH . G 3 HOH A 26 526 20 HOH HOH . G 3 HOH A 27 527 25 HOH HOH . G 3 HOH A 28 528 26 HOH HOH . G 3 HOH A 29 529 27 HOH HOH . G 3 HOH A 30 530 29 HOH HOH . G 3 HOH A 31 531 30 HOH HOH . G 3 HOH A 32 532 31 HOH HOH . G 3 HOH A 33 533 32 HOH HOH . G 3 HOH A 34 534 34 HOH HOH . G 3 HOH A 35 535 36 HOH HOH . G 3 HOH A 36 536 37 HOH HOH . G 3 HOH A 37 537 38 HOH HOH . G 3 HOH A 38 538 39 HOH HOH . G 3 HOH A 39 539 40 HOH HOH . G 3 HOH A 40 540 41 HOH HOH . G 3 HOH A 41 541 42 HOH HOH . G 3 HOH A 42 542 43 HOH HOH . G 3 HOH A 43 543 44 HOH HOH . G 3 HOH A 44 544 47 HOH HOH . G 3 HOH A 45 545 49 HOH HOH . G 3 HOH A 46 546 53 HOH HOH . G 3 HOH A 47 547 57 HOH HOH . G 3 HOH A 48 548 58 HOH HOH . G 3 HOH A 49 549 59 HOH HOH . G 3 HOH A 50 550 68 HOH HOH . G 3 HOH A 51 551 75 HOH HOH . G 3 HOH A 52 552 76 HOH HOH . G 3 HOH A 53 553 78 HOH HOH . G 3 HOH A 54 554 85 HOH HOH . G 3 HOH A 55 555 89 HOH HOH . G 3 HOH A 56 556 90 HOH HOH . G 3 HOH A 57 557 91 HOH HOH . G 3 HOH A 58 558 94 HOH HOH . G 3 HOH A 59 559 97 HOH HOH . G 3 HOH A 60 560 98 HOH HOH . G 3 HOH A 61 561 99 HOH HOH . G 3 HOH A 62 562 102 HOH HOH . G 3 HOH A 63 563 105 HOH HOH . G 3 HOH A 64 564 106 HOH HOH . G 3 HOH A 65 565 108 HOH HOH . G 3 HOH A 66 566 111 HOH HOH . G 3 HOH A 67 567 112 HOH HOH . G 3 HOH A 68 568 114 HOH HOH . G 3 HOH A 69 569 117 HOH HOH . G 3 HOH A 70 570 122 HOH HOH . G 3 HOH A 71 571 124 HOH HOH . G 3 HOH A 72 572 126 HOH HOH . G 3 HOH A 73 573 128 HOH HOH . G 3 HOH A 74 574 131 HOH HOH . G 3 HOH A 75 575 136 HOH HOH . G 3 HOH A 76 576 140 HOH HOH . G 3 HOH A 77 577 157 HOH HOH . G 3 HOH A 78 578 158 HOH HOH . G 3 HOH A 79 579 160 HOH HOH . G 3 HOH A 80 580 169 HOH HOH . H 3 HOH B 1 501 7 HOH HOH . H 3 HOH B 2 502 104 HOH HOH . H 3 HOH B 3 503 113 HOH HOH . H 3 HOH B 4 504 35 HOH HOH . H 3 HOH B 5 505 84 HOH HOH . H 3 HOH B 6 506 63 HOH HOH . H 3 HOH B 7 507 46 HOH HOH . H 3 HOH B 8 508 152 HOH HOH . H 3 HOH B 9 509 139 HOH HOH . H 3 HOH B 10 510 6 HOH HOH . H 3 HOH B 11 511 125 HOH HOH . H 3 HOH B 12 512 132 HOH HOH . H 3 HOH B 13 513 93 HOH HOH . H 3 HOH B 14 514 60 HOH HOH . H 3 HOH B 15 515 146 HOH HOH . H 3 HOH B 16 516 165 HOH HOH . H 3 HOH B 17 517 119 HOH HOH . H 3 HOH B 18 518 80 HOH HOH . H 3 HOH B 19 519 54 HOH HOH . H 3 HOH B 20 520 118 HOH HOH . H 3 HOH B 21 521 14 HOH HOH . H 3 HOH B 22 522 120 HOH HOH . H 3 HOH B 23 523 138 HOH HOH . H 3 HOH B 24 524 121 HOH HOH . H 3 HOH B 25 525 92 HOH HOH . H 3 HOH B 26 526 149 HOH HOH . H 3 HOH B 27 527 64 HOH HOH . H 3 HOH B 28 528 147 HOH HOH . H 3 HOH B 29 529 159 HOH HOH . H 3 HOH B 30 530 88 HOH HOH . H 3 HOH B 31 531 79 HOH HOH . H 3 HOH B 32 532 115 HOH HOH . H 3 HOH B 33 533 1 HOH HOH . H 3 HOH B 34 534 3 HOH HOH . H 3 HOH B 35 535 12 HOH HOH . H 3 HOH B 36 536 16 HOH HOH . H 3 HOH B 37 537 21 HOH HOH . H 3 HOH B 38 538 23 HOH HOH . H 3 HOH B 39 539 24 HOH HOH . H 3 HOH B 40 540 28 HOH HOH . H 3 HOH B 41 541 33 HOH HOH . H 3 HOH B 42 542 50 HOH HOH . H 3 HOH B 43 543 51 HOH HOH . H 3 HOH B 44 544 55 HOH HOH . H 3 HOH B 45 545 56 HOH HOH . H 3 HOH B 46 546 61 HOH HOH . H 3 HOH B 47 547 62 HOH HOH . H 3 HOH B 48 548 65 HOH HOH . H 3 HOH B 49 549 66 HOH HOH . H 3 HOH B 50 550 67 HOH HOH . H 3 HOH B 51 551 70 HOH HOH . H 3 HOH B 52 552 71 HOH HOH . H 3 HOH B 53 553 73 HOH HOH . H 3 HOH B 54 554 74 HOH HOH . H 3 HOH B 55 555 77 HOH HOH . H 3 HOH B 56 556 81 HOH HOH . H 3 HOH B 57 557 82 HOH HOH . H 3 HOH B 58 558 83 HOH HOH . H 3 HOH B 59 559 87 HOH HOH . H 3 HOH B 60 560 95 HOH HOH . H 3 HOH B 61 561 96 HOH HOH . H 3 HOH B 62 562 101 HOH HOH . H 3 HOH B 63 563 107 HOH HOH . H 3 HOH B 64 564 109 HOH HOH . H 3 HOH B 65 565 116 HOH HOH . H 3 HOH B 66 566 123 HOH HOH . H 3 HOH B 67 567 129 HOH HOH . H 3 HOH B 68 568 130 HOH HOH . H 3 HOH B 69 569 133 HOH HOH . H 3 HOH B 70 570 134 HOH HOH . H 3 HOH B 71 571 135 HOH HOH . H 3 HOH B 72 572 137 HOH HOH . H 3 HOH B 73 573 141 HOH HOH . H 3 HOH B 74 574 142 HOH HOH . H 3 HOH B 75 575 150 HOH HOH . H 3 HOH B 76 576 151 HOH HOH . H 3 HOH B 77 577 153 HOH HOH . H 3 HOH B 78 578 161 HOH HOH . H 3 HOH B 79 579 164 HOH HOH . H 3 HOH B 80 580 173 HOH HOH . H 3 HOH B 81 581 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O15 37R . . . D 2 -20.275 6.127 -11.778 1 44.52 ? O15 37R 402 A 1 HETATM 2 C C2 37R . . . D 2 -19.94 6.562 -10.535 1 41.89 ? C2 37R 402 A 1 HETATM 3 C C1 37R . . . D 2 -20.073 7.926 -10.201 1 40.1 ? C1 37R 402 A 1 HETATM 4 C C6 37R . . . D 2 -19.721 8.36 -8.924 1 41.45 ? C6 37R 402 A 1 HETATM 5 O O7 37R . . . D 2 -19.829 9.683 -8.529 1 42.95 ? O7 37R 402 A 1 HETATM 6 C C8 37R . . . D 2 -19.432 10.031 -7.243 1 48.01 ? C8 37R 402 A 1 HETATM 7 C C17 37R . . . D 2 -19.489 11.349 -6.779 1 50.76 ? C17 37R 402 A 1 HETATM 8 C C12 37R . . . D 2 -19.093 11.674 -5.473 1 56.54 ? C12 37R 402 A 1 HETATM 9 O O16 37R . . . D 2 -19.17 12.864 -5.086 1 65.91 ? O16 37R 402 A 1 HETATM 10 C C3 37R . . . D 2 -19.478 5.613 -9.624 1 39.97 ? C3 37R 402 A 1 HETATM 11 C C4 37R . . . D 2 -19.097 6.008 -8.346 1 45.59 ? C4 37R 402 A 1 HETATM 12 C C11 37R . . . D 2 -19.196 7.346 -7.953 1 44.57 ? C11 37R 402 A 1 HETATM 13 N N10 37R . . . D 2 -18.807 7.705 -6.702 1 44.24 ? N10 37R 402 A 1 HETATM 14 C C9 37R . . . D 2 -18.9 8.996 -6.292 1 48.53 ? C9 37R 402 A 1 HETATM 15 C C14 37R . . . D 2 -18.515 9.368 -4.999 1 49.15 ? C14 37R 402 A 1 HETATM 16 C C13 37R . . . D 2 -18.608 10.708 -4.581 1 54.49 ? C13 37R 402 A 1 HETATM 17 C C15 37R . . . D 2 -18.178 11.077 -3.166 1 52.89 ? C15 37R 402 A 1 HETATM 18 C C16 37R . . . D 2 -19.345 11.382 -2.221 1 54.06 ? C16 37R 402 A 1 HETATM 19 H H2 37R . . . D 2 -20.578 6.875 -12.31 1 53.42 ? H2 37R 402 A 1 HETATM 20 H H1 37R . . . D 2 -20.455 8.63 -10.929 1 48.12 ? H1 37R 402 A 1 HETATM 21 H H17 37R . . . D 2 -19.86 12.129 -7.433 1 60.91 ? H17 37R 402 A 1 HETATM 22 H HO16 37R . . . D 2 -19.519 13.414 -5.801 1 79.09 ? HO16 37R 402 A 1 HETATM 23 H H3 37R . . . D 2 -19.382 4.576 -9.923 1 47.96 ? H3 37R 402 A 1 HETATM 24 H H4 37R . . . D 2 -18.713 5.272 -7.65 1 54.71 ? H4 37R 402 A 1 HETATM 25 H H14 37R . . . D 2 -18.146 8.616 -4.312 1 58.98 ? H14 37R 402 A 1 HETATM 26 H H152 37R . . . D 2 -17.524 11.95 -3.213 1 63.47 ? H152 37R 402 A 1 HETATM 27 H H151 37R . . . D 2 -17.593 10.255 -2.75 1 63.47 ? H151 37R 402 A 1 HETATM 28 H H161 37R . . . D 2 -18.968 11.628 -1.263 1 64.87 ? H161 37R 402 A 1 HETATM 29 H H162 37R . . . D 2 -19.97 10.531 -2.146 1 64.87 ? H162 37R 402 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #