data_4TW6 # _model_server_result.job_id vkQWBa6S--H13GX4JaZFAw _model_server_result.datetime_utc '2024-11-26 07:29:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4tw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 4TW6 # _exptl.entry_id 4TW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TW6 _cell.length_a 44.995 _cell.length_b 48.552 _cell.length_c 56.666 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D NA NA . A NA 203 1_555 E O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc2 D NA NA . A NA 203 1_555 E O HOH . A HOH 394 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc3 D NA NA . A NA 203 1_555 E O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 230 n n C1 C2 GOL sing 231 n n C1 H11 GOL sing 232 n n C1 H12 GOL sing 233 n n O1 HO1 GOL sing 234 n n C2 O2 GOL sing 235 n n C2 C3 GOL sing 236 n n C2 H2 GOL sing 237 n n O2 HO2 GOL sing 238 n n C3 O3 GOL sing 239 n n C3 H31 GOL sing 240 n n C3 H32 GOL sing 241 n n O3 HO3 GOL sing 242 n n # _atom_sites.entry_id 4TW6 _atom_sites.fract_transf_matrix[1][1] 0.022225 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017647 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 37L A 1 201 1 37L DRG . C 3 GOL A 1 202 1 GOL GOL . D 4 NA A 1 203 1 NA NA . E 5 HOH A 1 301 75 HOH HOH . E 5 HOH A 2 302 168 HOH HOH . E 5 HOH A 3 303 113 HOH HOH . E 5 HOH A 4 304 96 HOH HOH . E 5 HOH A 5 305 164 HOH HOH . E 5 HOH A 6 306 156 HOH HOH . E 5 HOH A 7 307 72 HOH HOH . E 5 HOH A 8 308 111 HOH HOH . E 5 HOH A 9 309 97 HOH HOH . E 5 HOH A 10 310 99 HOH HOH . E 5 HOH A 11 311 67 HOH HOH . E 5 HOH A 12 312 24 HOH HOH . E 5 HOH A 13 313 176 HOH HOH . E 5 HOH A 14 314 108 HOH HOH . E 5 HOH A 15 315 68 HOH HOH . E 5 HOH A 16 316 121 HOH HOH . E 5 HOH A 17 317 35 HOH HOH . E 5 HOH A 18 318 77 HOH HOH . E 5 HOH A 19 319 145 HOH HOH . E 5 HOH A 20 320 71 HOH HOH . E 5 HOH A 21 321 54 HOH HOH . E 5 HOH A 22 322 50 HOH HOH . E 5 HOH A 23 323 127 HOH HOH . E 5 HOH A 24 324 171 HOH HOH . E 5 HOH A 25 325 51 HOH HOH . E 5 HOH A 26 326 194 HOH HOH . E 5 HOH A 27 327 14 HOH HOH . E 5 HOH A 28 328 34 HOH HOH . E 5 HOH A 29 329 28 HOH HOH . E 5 HOH A 30 330 116 HOH HOH . E 5 HOH A 31 331 22 HOH HOH . E 5 HOH A 32 332 109 HOH HOH . E 5 HOH A 33 333 114 HOH HOH . E 5 HOH A 34 334 56 HOH HOH . E 5 HOH A 35 335 132 HOH HOH . E 5 HOH A 36 336 10 HOH HOH . E 5 HOH A 37 337 148 HOH HOH . E 5 HOH A 38 338 5 HOH HOH . E 5 HOH A 39 339 32 HOH HOH . E 5 HOH A 40 340 78 HOH HOH . E 5 HOH A 41 341 20 HOH HOH . E 5 HOH A 42 342 95 HOH HOH . E 5 HOH A 43 343 158 HOH HOH . E 5 HOH A 44 344 190 HOH HOH . E 5 HOH A 45 345 183 HOH HOH . E 5 HOH A 46 346 83 HOH HOH . E 5 HOH A 47 347 128 HOH HOH . E 5 HOH A 48 348 201 HOH HOH . E 5 HOH A 49 349 41 HOH HOH . E 5 HOH A 50 350 11 HOH HOH . E 5 HOH A 51 351 193 HOH HOH . E 5 HOH A 52 352 138 HOH HOH . E 5 HOH A 53 353 23 HOH HOH . E 5 HOH A 54 354 2 HOH HOH . E 5 HOH A 55 355 46 HOH HOH . E 5 HOH A 56 356 126 HOH HOH . E 5 HOH A 57 357 89 HOH HOH . E 5 HOH A 58 358 55 HOH HOH . E 5 HOH A 59 359 36 HOH HOH . E 5 HOH A 60 360 26 HOH HOH . E 5 HOH A 61 361 198 HOH HOH . E 5 HOH A 62 362 52 HOH HOH . E 5 HOH A 63 363 76 HOH HOH . E 5 HOH A 64 364 150 HOH HOH . E 5 HOH A 65 365 29 HOH HOH . E 5 HOH A 66 366 175 HOH HOH . E 5 HOH A 67 367 8 HOH HOH . E 5 HOH A 68 368 53 HOH HOH . E 5 HOH A 69 369 70 HOH HOH . E 5 HOH A 70 370 125 HOH HOH . E 5 HOH A 71 371 42 HOH HOH . E 5 HOH A 72 372 17 HOH HOH . E 5 HOH A 73 373 38 HOH HOH . E 5 HOH A 74 374 119 HOH HOH . E 5 HOH A 75 375 45 HOH HOH . E 5 HOH A 76 376 43 HOH HOH . E 5 HOH A 77 377 87 HOH HOH . E 5 HOH A 78 378 73 HOH HOH . E 5 HOH A 79 379 139 HOH HOH . E 5 HOH A 80 380 152 HOH HOH . E 5 HOH A 81 381 166 HOH HOH . E 5 HOH A 82 382 59 HOH HOH . E 5 HOH A 83 383 196 HOH HOH . E 5 HOH A 84 384 122 HOH HOH . E 5 HOH A 85 385 94 HOH HOH . E 5 HOH A 86 386 141 HOH HOH . E 5 HOH A 87 387 178 HOH HOH . E 5 HOH A 88 388 135 HOH HOH . E 5 HOH A 89 389 133 HOH HOH . E 5 HOH A 90 390 154 HOH HOH . E 5 HOH A 91 391 104 HOH HOH . E 5 HOH A 92 392 106 HOH HOH . E 5 HOH A 93 393 86 HOH HOH . E 5 HOH A 94 394 1 HOH HOH . E 5 HOH A 95 395 142 HOH HOH . E 5 HOH A 96 396 93 HOH HOH . E 5 HOH A 97 397 105 HOH HOH . E 5 HOH A 98 398 102 HOH HOH . E 5 HOH A 99 399 27 HOH HOH . E 5 HOH A 100 400 130 HOH HOH . E 5 HOH A 101 401 199 HOH HOH . E 5 HOH A 102 402 48 HOH HOH . E 5 HOH A 103 403 92 HOH HOH . E 5 HOH A 104 404 39 HOH HOH . E 5 HOH A 105 405 31 HOH HOH . E 5 HOH A 106 406 134 HOH HOH . E 5 HOH A 107 407 81 HOH HOH . E 5 HOH A 108 408 205 HOH HOH . E 5 HOH A 109 409 30 HOH HOH . E 5 HOH A 110 410 197 HOH HOH . E 5 HOH A 111 411 131 HOH HOH . E 5 HOH A 112 412 184 HOH HOH . E 5 HOH A 113 413 202 HOH HOH . E 5 HOH A 114 414 129 HOH HOH . E 5 HOH A 115 415 117 HOH HOH . E 5 HOH A 116 416 118 HOH HOH . E 5 HOH A 117 417 136 HOH HOH . E 5 HOH A 118 418 98 HOH HOH . E 5 HOH A 119 419 3 HOH HOH . E 5 HOH A 120 420 4 HOH HOH . E 5 HOH A 121 421 6 HOH HOH . E 5 HOH A 122 422 7 HOH HOH . E 5 HOH A 123 423 9 HOH HOH . E 5 HOH A 124 424 12 HOH HOH . E 5 HOH A 125 425 13 HOH HOH . E 5 HOH A 126 426 15 HOH HOH . E 5 HOH A 127 427 16 HOH HOH . E 5 HOH A 128 428 18 HOH HOH . E 5 HOH A 129 429 19 HOH HOH . E 5 HOH A 130 430 21 HOH HOH . E 5 HOH A 131 431 25 HOH HOH . E 5 HOH A 132 432 37 HOH HOH . E 5 HOH A 133 433 40 HOH HOH . E 5 HOH A 134 434 44 HOH HOH . E 5 HOH A 135 435 47 HOH HOH . E 5 HOH A 136 436 49 HOH HOH . E 5 HOH A 137 437 57 HOH HOH . E 5 HOH A 138 438 58 HOH HOH . E 5 HOH A 139 439 60 HOH HOH . E 5 HOH A 140 440 61 HOH HOH . E 5 HOH A 141 441 62 HOH HOH . E 5 HOH A 142 442 63 HOH HOH . E 5 HOH A 143 443 64 HOH HOH . E 5 HOH A 144 444 65 HOH HOH . E 5 HOH A 145 445 66 HOH HOH . E 5 HOH A 146 446 69 HOH HOH . E 5 HOH A 147 447 74 HOH HOH . E 5 HOH A 148 448 79 HOH HOH . E 5 HOH A 149 449 80 HOH HOH . E 5 HOH A 150 450 82 HOH HOH . E 5 HOH A 151 451 84 HOH HOH . E 5 HOH A 152 452 85 HOH HOH . E 5 HOH A 153 453 88 HOH HOH . E 5 HOH A 154 454 90 HOH HOH . E 5 HOH A 155 455 100 HOH HOH . E 5 HOH A 156 456 101 HOH HOH . E 5 HOH A 157 457 103 HOH HOH . E 5 HOH A 158 458 107 HOH HOH . E 5 HOH A 159 459 110 HOH HOH . E 5 HOH A 160 460 112 HOH HOH . E 5 HOH A 161 461 115 HOH HOH . E 5 HOH A 162 462 120 HOH HOH . E 5 HOH A 163 463 124 HOH HOH . E 5 HOH A 164 464 137 HOH HOH . E 5 HOH A 165 465 140 HOH HOH . E 5 HOH A 166 466 144 HOH HOH . E 5 HOH A 167 467 146 HOH HOH . E 5 HOH A 168 468 149 HOH HOH . E 5 HOH A 169 469 151 HOH HOH . E 5 HOH A 170 470 153 HOH HOH . E 5 HOH A 171 471 155 HOH HOH . E 5 HOH A 172 472 159 HOH HOH . E 5 HOH A 173 473 161 HOH HOH . E 5 HOH A 174 474 162 HOH HOH . E 5 HOH A 175 475 163 HOH HOH . E 5 HOH A 176 476 165 HOH HOH . E 5 HOH A 177 477 169 HOH HOH . E 5 HOH A 178 478 174 HOH HOH . E 5 HOH A 179 479 177 HOH HOH . E 5 HOH A 180 480 179 HOH HOH . E 5 HOH A 181 481 180 HOH HOH . E 5 HOH A 182 482 182 HOH HOH . E 5 HOH A 183 483 185 HOH HOH . E 5 HOH A 184 484 186 HOH HOH . E 5 HOH A 185 485 187 HOH HOH . E 5 HOH A 186 486 188 HOH HOH . E 5 HOH A 187 487 189 HOH HOH . E 5 HOH A 188 488 191 HOH HOH . E 5 HOH A 189 489 195 HOH HOH . E 5 HOH A 190 490 200 HOH HOH . E 5 HOH A 191 491 203 HOH HOH . E 5 HOH A 192 492 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -1.106 11.3 -13.419 1 15.59 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 3 -1.28 12.538 -14.055 1 13.44 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 3 -0.404 11.233 -12.151 1 17.01 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 3 -1.242 11.859 -11.204 1 24.15 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 3 0.871 11.958 -12.037 1 17.54 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 3 1.828 11.441 -13.049 1 17.38 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #