data_4TWB
#
_model_server_result.job_id            c2ghXkfsVW6rXAg9jgdnbA 
_model_server_result.datetime_utc      '2024-10-28 02:34:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4twb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    4TWB 
#
_exptl.entry_id    4TWB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.91 
_cell.angle_gamma         90 
_cell.entry_id            4TWB 
_cell.length_a            80.217 
_cell.length_b            92.846 
_cell.length_c            138.338 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TWB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA Dimeric 2 author_and_software_defined_assembly 1 
PISA Dimeric 2 author_and_software_defined_assembly 2 
PISA Dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J,S,T 1 1 
C,D,K,L,M,N,U,V 2 1 
E,F,O,P,Q,R,W,X 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 P N N 
? 2 Q N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     4TWB 
_atom_sites.fract_transf_matrix[1][1]    0.012466 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000198 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00723 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 AMP A 1 301 301 AMP AMP . 
H 3 SO4 A 1 302 302 SO4 SO4 . 
I 2 AMP A 1 303 301 AMP AMP . 
J 3 SO4 B 1 301 302 SO4 SO4 . 
K 2 AMP C 1 301 301 AMP AMP . 
L 3 SO4 C 1 302 302 SO4 SO4 . 
M 2 AMP C 1 303 301 AMP AMP . 
N 3 SO4 D 1 301 302 SO4 SO4 . 
O 3 SO4 E 1 301 302 SO4 SO4 . 
P 2 AMP E 1 302 301 AMP AMP . 
Q 2 AMP F 1 301 301 AMP AMP . 
R 3 SO4 F 1 302 302 SO4 SO4 . 
S 4 HOH A 1 401 402 HOH HOH . 
S 4 HOH A 2 402 404 HOH HOH . 
S 4 HOH A 3 403 405 HOH HOH . 
S 4 HOH A 4 404 403 HOH HOH . 
T 4 HOH B 1 401 403 HOH HOH . 
T 4 HOH B 2 402 402 HOH HOH . 
T 4 HOH B 3 403 404 HOH HOH . 
T 4 HOH B 4 404 405 HOH HOH . 
U 4 HOH C 1 401 402 HOH HOH . 
U 4 HOH C 2 402 404 HOH HOH . 
U 4 HOH C 3 403 405 HOH HOH . 
U 4 HOH C 4 404 403 HOH HOH . 
V 4 HOH D 1 401 403 HOH HOH . 
V 4 HOH D 2 402 402 HOH HOH . 
V 4 HOH D 3 403 404 HOH HOH . 
V 4 HOH D 4 404 405 HOH HOH . 
W 4 HOH E 1 401 402 HOH HOH . 
W 4 HOH E 2 402 404 HOH HOH . 
W 4 HOH E 3 403 405 HOH HOH . 
W 4 HOH E 4 404 403 HOH HOH . 
X 4 HOH F 1 401 403 HOH HOH . 
X 4 HOH F 2 402 402 HOH HOH . 
X 4 HOH F 3 403 404 HOH HOH . 
X 4 HOH F 4 404 405 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . G 2 33.837 16.703 29.727 1 171.79 ? P AMP 301 A 1 
HETATM 2 O O1P AMP . . . G 2 33.045 16.508 28.453 1 141.93 ? O1P AMP 301 A 1 
HETATM 3 O O2P AMP . . . G 2 33.633 18.042 30.405 1 132.28 ? O2P AMP 301 A 1 
HETATM 4 O O3P AMP . . . G 2 33.806 15.506 30.652 1 128.45 ? O3P AMP 301 A 1 
HETATM 5 O O5' AMP . . . G 2 35.366 16.743 29.223 1 144.96 ? O5' AMP 301 A 1 
HETATM 6 C C5' AMP . . . G 2 36.338 15.889 29.823 1 121.64 ? C5' AMP 301 A 1 
HETATM 7 C C4' AMP . . . G 2 37.517 16.72 30.315 1 115.95 ? C4' AMP 301 A 1 
HETATM 8 O O4' AMP . . . G 2 37.107 17.544 31.416 1 99.01 ? O4' AMP 301 A 1 
HETATM 9 C C3' AMP . . . G 2 38.659 15.83 30.792 1 109.43 ? C3' AMP 301 A 1 
HETATM 10 O O3' AMP . . . G 2 39.832 16.083 30.006 1 94.69 ? O3' AMP 301 A 1 
HETATM 11 C C2' AMP . . . G 2 38.863 16.18 32.262 1 107.04 ? C2' AMP 301 A 1 
HETATM 12 O O2' AMP . . . G 2 40.251 16.308 32.618 1 99.83 ? O2' AMP 301 A 1 
HETATM 13 C C1' AMP . . . G 2 38.081 17.479 32.463 1 93.18 ? C1' AMP 301 A 1 
HETATM 14 N N9 AMP . . . G 2 37.465 17.548 33.822 1 77.2 ? N9 AMP 301 A 1 
HETATM 15 C C8 AMP . . . G 2 37.355 16.53 34.712 1 59.18 ? C8 AMP 301 A 1 
HETATM 16 N N7 AMP . . . G 2 36.755 16.932 35.864 1 44.41 ? N7 AMP 301 A 1 
HETATM 17 C C5 AMP . . . G 2 36.486 18.248 35.725 1 44.62 ? C5 AMP 301 A 1 
HETATM 18 C C6 AMP . . . G 2 35.867 19.305 36.561 1 40.29 ? C6 AMP 301 A 1 
HETATM 19 N N6 AMP . . . G 2 35.408 19.012 37.802 1 43.97 ? N6 AMP 301 A 1 
HETATM 20 N N1 AMP . . . G 2 35.766 20.561 36.044 1 57.64 ? N1 AMP 301 A 1 
HETATM 21 C C2 AMP . . . G 2 36.212 20.857 34.802 1 58.35 ? C2 AMP 301 A 1 
HETATM 22 N N3 AMP . . . G 2 36.791 19.954 33.981 1 51.88 ? N3 AMP 301 A 1 
HETATM 23 C C4 AMP . . . G 2 36.959 18.657 34.383 1 68.88 ? C4 AMP 301 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           223 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           23 
#