data_4TWD # _model_server_result.job_id 1mTJlCUTvUeO4l5Z7nK0QQ _model_server_result.datetime_utc '2024-11-04 22:43:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4twd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":401}' # _entry.id 4TWD # _exptl.entry_id 4TWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Memantine _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.28 _cell.angle_gamma 90 _cell.entry_id 4TWD _cell.length_a 105.482 _cell.length_b 265.284 _cell.length_c 111.098 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA Pentameric 5 author_and_software_defined_assembly 1 PISA Pentameric 5 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O,P 1 1 F,G,H,I,J,Q,R,S,T,U,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N # _chem_comp.formula 'C12 H21 N' _chem_comp.formula_weight 179.302 _chem_comp.id 377 _chem_comp.mon_nstd_flag . _chem_comp.name Memantine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C02 377 sing 1 n n C09 C02 377 sing 2 n n C09 C05 377 sing 3 n n C02 C07 377 sing 4 n n C02 C06 377 sing 5 n n C05 C11 377 sing 6 n n C05 C10 377 sing 7 n n C07 C04 377 sing 8 n n C11 C04 377 sing 9 n n C06 C03 377 sing 10 n n C10 C03 377 sing 11 n n C04 N01 377 sing 12 n n C04 C08 377 sing 13 n n C03 C08 377 sing 14 n n C03 C13 377 sing 15 n n C10 H1 377 sing 16 n n C10 H2 377 sing 17 n n C11 H3 377 sing 18 n n C11 H4 377 sing 19 n n N01 H5 377 sing 20 n n N01 H6 377 sing 21 n n C05 H8 377 sing 22 n n C06 H9 377 sing 23 n n C06 H10 377 sing 24 n n C07 H11 377 sing 25 n n C07 H12 377 sing 26 n n C08 H13 377 sing 27 n n C08 H14 377 sing 28 n n C09 H15 377 sing 29 n n C09 H16 377 sing 30 n n C12 H17 377 sing 31 n n C12 H18 377 sing 32 n n C12 H19 377 sing 33 n n C13 H20 377 sing 34 n n C13 H21 377 sing 35 n n C13 H22 377 sing 36 n n # _atom_sites.entry_id 4TWD _atom_sites.fract_transf_matrix[1][1] 0.00948 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003503 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00377 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 377 A 1 401 401 377 MEM . L 2 377 A 1 402 401 377 MEM . M 2 377 B 1 401 401 377 MEM . N 2 377 C 1 401 401 377 MEM . O 2 377 C 1 402 401 377 MEM . P 2 377 E 1 401 401 377 MEM . Q 2 377 F 1 401 401 377 MEM . R 2 377 F 1 402 401 377 MEM . S 2 377 G 1 401 401 377 MEM . T 2 377 H 1 401 401 377 MEM . U 2 377 H 1 402 401 377 MEM . V 2 377 J 1 401 401 377 MEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 377 . . . M 2 -114.257 -68.291 -61.61 1 109.52 ? C10 377 401 B 1 HETATM 2 C C11 377 . . . M 2 -112.159 -68.592 -62.799 1 107.93 ? C11 377 401 B 1 HETATM 3 N N01 377 . . . M 2 -110.457 -70.057 -61.882 1 105.19 ? N01 377 401 B 1 HETATM 4 C C02 377 . . . M 2 -113.913 -70.788 -62.961 1 102.41 ? C02 377 401 B 1 HETATM 5 C C03 377 . . . M 2 -114.005 -69.581 -60.88 1 109.3 ? C03 377 401 B 1 HETATM 6 C C04 377 . . . M 2 -111.883 -69.862 -62.04 1 105.93 ? C04 377 401 B 1 HETATM 7 C C05 377 . . . M 2 -113.625 -68.352 -62.955 1 105.95 ? C05 377 401 B 1 HETATM 8 C C06 377 . . . M 2 -114.551 -70.772 -61.617 1 103.34 ? C06 377 401 B 1 HETATM 9 C C07 377 . . . M 2 -112.448 -71.027 -62.795 1 101.94 ? C07 377 401 B 1 HETATM 10 C C08 377 . . . M 2 -112.529 -69.753 -60.688 1 108.04 ? C08 377 401 B 1 HETATM 11 C C09 377 . . . M 2 -114.217 -69.506 -63.674 1 106.25 ? C09 377 401 B 1 HETATM 12 C C12 377 . . . M 2 -114.478 -71.845 -63.819 1 108.3 ? C12 377 401 B 1 HETATM 13 C C13 377 . . . M 2 -114.678 -69.484 -59.556 1 115.71 ? C13 377 401 B 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 13 #