data_4TWN # _model_server_result.job_id 24ep9R5NohrV9gpRnZuPJg _model_server_result.datetime_utc '2024-11-04 23:24:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4twn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 4TWN # _exptl.entry_id 4TWN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 527.657 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.5 _cell.angle_gamma 90 _cell.entry_id 4TWN _cell.length_a 55.481 _cell.length_b 38.421 _cell.length_c 74.141 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TWN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C31 H37 N5 O3' _chem_comp.formula_weight 527.657 _chem_comp.id B96 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(5-TERT-BUTYL-2-P-TOLYL-2H-PYRAZOL-3-YL)-3-[4-(2-MORPHOLIN-4-YL-ETHOXY)-NAPHTHALEN-1-YL]-UREA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 B96 doub 70 n n C1 N2 B96 sing 71 n n C1 N9 B96 sing 72 n n N2 C3 B96 sing 73 n n N2 H2 B96 sing 74 n n C3 C4 B96 doub 75 n y C3 C8 B96 sing 76 n y C4 C5 B96 sing 77 n y C4 C31 B96 sing 78 n y C5 C6 B96 doub 79 n y C5 C34 B96 sing 80 n y C6 C7 B96 sing 81 n y C6 O41 B96 sing 82 n n C31 C32 B96 doub 83 n y C31 H31 B96 sing 84 n n C32 C33 B96 sing 85 n y C32 H32 B96 sing 86 n n C33 C34 B96 doub 87 n y C33 H33 B96 sing 88 n n C34 H34 B96 sing 89 n n C7 C8 B96 doub 90 n y C7 H7 B96 sing 91 n n C8 H8 B96 sing 92 n n N9 C10 B96 sing 93 n n N9 H9 B96 sing 94 n n C10 C14 B96 doub 95 n y C10 N11 B96 sing 96 n y C14 C13 B96 sing 97 n y C14 H14 B96 sing 98 n n C13 N12 B96 doub 99 n y C13 C16 B96 sing 100 n n N12 N11 B96 sing 101 n y N11 C15 B96 sing 102 n y C15 C20 B96 doub 103 n y C15 C24 B96 sing 104 n y C17 C16 B96 sing 105 n n C17 H171 B96 sing 106 n n C17 H172 B96 sing 107 n n C17 H173 B96 sing 108 n n C18 C16 B96 sing 109 n n C18 H181 B96 sing 110 n n C18 H182 B96 sing 111 n n C18 H183 B96 sing 112 n n C19 C16 B96 sing 113 n n C19 H191 B96 sing 114 n n C19 H192 B96 sing 115 n n C19 H193 B96 sing 116 n n C20 C21 B96 sing 117 n y C20 H20 B96 sing 118 n n C21 C22 B96 doub 119 n y C21 H21 B96 sing 120 n n C22 C23 B96 sing 121 n y C22 C25 B96 sing 122 n n C23 C24 B96 doub 123 n y C23 H23 B96 sing 124 n n C24 H24 B96 sing 125 n n C25 H251 B96 sing 126 n n C25 H252 B96 sing 127 n n C25 H253 B96 sing 128 n n O41 C42 B96 sing 129 n n C42 C43 B96 sing 130 n n C42 H421 B96 sing 131 n n C42 H422 B96 sing 132 n n C43 N44 B96 sing 133 n n C43 H431 B96 sing 134 n n C43 H432 B96 sing 135 n n N44 C45 B96 sing 136 n n N44 C49 B96 sing 137 n n C45 C46 B96 sing 138 n n C45 H451 B96 sing 139 n n C45 H452 B96 sing 140 n n C46 O47 B96 sing 141 n n C46 H461 B96 sing 142 n n C46 H462 B96 sing 143 n n O47 C48 B96 sing 144 n n C48 C49 B96 sing 145 n n C48 H481 B96 sing 146 n n C48 H482 B96 sing 147 n n C49 H491 B96 sing 148 n n C49 H492 B96 sing 149 n n # _atom_sites.entry_id 4TWN _atom_sites.fract_transf_matrix[1][1] 0.018024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B96 A 1 1001 1 B96 B96 . C 3 HOH A 1 1101 106 HOH HOH . C 3 HOH A 2 1102 112 HOH HOH . C 3 HOH A 3 1103 158 HOH HOH . C 3 HOH A 4 1104 78 HOH HOH . C 3 HOH A 5 1105 126 HOH HOH . C 3 HOH A 6 1106 49 HOH HOH . C 3 HOH A 7 1107 65 HOH HOH . C 3 HOH A 8 1108 48 HOH HOH . C 3 HOH A 9 1109 69 HOH HOH . C 3 HOH A 10 1110 77 HOH HOH . C 3 HOH A 11 1111 15 HOH HOH . C 3 HOH A 12 1112 144 HOH HOH . C 3 HOH A 13 1113 128 HOH HOH . C 3 HOH A 14 1114 8 HOH HOH . C 3 HOH A 15 1115 32 HOH HOH . C 3 HOH A 16 1116 37 HOH HOH . C 3 HOH A 17 1117 16 HOH HOH . C 3 HOH A 18 1118 72 HOH HOH . C 3 HOH A 19 1119 28 HOH HOH . C 3 HOH A 20 1120 162 HOH HOH . C 3 HOH A 21 1121 39 HOH HOH . C 3 HOH A 22 1122 66 HOH HOH . C 3 HOH A 23 1123 23 HOH HOH . C 3 HOH A 24 1124 110 HOH HOH . C 3 HOH A 25 1125 104 HOH HOH . C 3 HOH A 26 1126 40 HOH HOH . C 3 HOH A 27 1127 116 HOH HOH . C 3 HOH A 28 1128 113 HOH HOH . C 3 HOH A 29 1129 21 HOH HOH . C 3 HOH A 30 1130 134 HOH HOH . C 3 HOH A 31 1131 71 HOH HOH . C 3 HOH A 32 1132 109 HOH HOH . C 3 HOH A 33 1133 169 HOH HOH . C 3 HOH A 34 1134 43 HOH HOH . C 3 HOH A 35 1135 150 HOH HOH . C 3 HOH A 36 1136 132 HOH HOH . C 3 HOH A 37 1137 42 HOH HOH . C 3 HOH A 38 1138 55 HOH HOH . C 3 HOH A 39 1139 133 HOH HOH . C 3 HOH A 40 1140 135 HOH HOH . C 3 HOH A 41 1141 91 HOH HOH . C 3 HOH A 42 1142 95 HOH HOH . C 3 HOH A 43 1143 165 HOH HOH . C 3 HOH A 44 1144 123 HOH HOH . C 3 HOH A 45 1145 74 HOH HOH . C 3 HOH A 46 1146 118 HOH HOH . C 3 HOH A 47 1147 81 HOH HOH . C 3 HOH A 48 1148 70 HOH HOH . C 3 HOH A 49 1149 159 HOH HOH . C 3 HOH A 50 1150 117 HOH HOH . C 3 HOH A 51 1151 155 HOH HOH . C 3 HOH A 52 1152 80 HOH HOH . C 3 HOH A 53 1153 47 HOH HOH . C 3 HOH A 54 1154 101 HOH HOH . C 3 HOH A 55 1155 148 HOH HOH . C 3 HOH A 56 1156 83 HOH HOH . C 3 HOH A 57 1157 160 HOH HOH . C 3 HOH A 58 1158 153 HOH HOH . C 3 HOH A 59 1159 108 HOH HOH . C 3 HOH A 60 1160 171 HOH HOH . C 3 HOH A 61 1161 164 HOH HOH . C 3 HOH A 62 1162 151 HOH HOH . C 3 HOH A 63 1163 129 HOH HOH . C 3 HOH A 64 1164 149 HOH HOH . C 3 HOH A 65 1165 98 HOH HOH . C 3 HOH A 66 1166 36 HOH HOH . C 3 HOH A 67 1167 124 HOH HOH . C 3 HOH A 68 1168 174 HOH HOH . C 3 HOH A 69 1169 1 HOH HOH . C 3 HOH A 70 1170 2 HOH HOH . C 3 HOH A 71 1171 3 HOH HOH . C 3 HOH A 72 1172 4 HOH HOH . C 3 HOH A 73 1173 5 HOH HOH . C 3 HOH A 74 1174 6 HOH HOH . C 3 HOH A 75 1175 7 HOH HOH . C 3 HOH A 76 1176 9 HOH HOH . C 3 HOH A 77 1177 10 HOH HOH . C 3 HOH A 78 1178 11 HOH HOH . C 3 HOH A 79 1179 12 HOH HOH . C 3 HOH A 80 1180 13 HOH HOH . C 3 HOH A 81 1181 14 HOH HOH . C 3 HOH A 82 1182 17 HOH HOH . C 3 HOH A 83 1183 18 HOH HOH . C 3 HOH A 84 1184 19 HOH HOH . C 3 HOH A 85 1185 20 HOH HOH . C 3 HOH A 86 1186 22 HOH HOH . C 3 HOH A 87 1187 24 HOH HOH . C 3 HOH A 88 1188 25 HOH HOH . C 3 HOH A 89 1189 26 HOH HOH . C 3 HOH A 90 1190 27 HOH HOH . C 3 HOH A 91 1191 29 HOH HOH . C 3 HOH A 92 1192 30 HOH HOH . C 3 HOH A 93 1193 31 HOH HOH . C 3 HOH A 94 1194 33 HOH HOH . C 3 HOH A 95 1195 34 HOH HOH . C 3 HOH A 96 1196 35 HOH HOH . C 3 HOH A 97 1197 38 HOH HOH . C 3 HOH A 98 1198 41 HOH HOH . C 3 HOH A 99 1199 44 HOH HOH . C 3 HOH A 100 1200 45 HOH HOH . C 3 HOH A 101 1201 46 HOH HOH . C 3 HOH A 102 1202 50 HOH HOH . C 3 HOH A 103 1203 51 HOH HOH . C 3 HOH A 104 1204 52 HOH HOH . C 3 HOH A 105 1205 53 HOH HOH . C 3 HOH A 106 1206 54 HOH HOH . C 3 HOH A 107 1207 56 HOH HOH . C 3 HOH A 108 1208 57 HOH HOH . C 3 HOH A 109 1209 58 HOH HOH . C 3 HOH A 110 1210 59 HOH HOH . C 3 HOH A 111 1211 60 HOH HOH . C 3 HOH A 112 1212 61 HOH HOH . C 3 HOH A 113 1213 62 HOH HOH . C 3 HOH A 114 1214 63 HOH HOH . C 3 HOH A 115 1215 64 HOH HOH . C 3 HOH A 116 1216 67 HOH HOH . C 3 HOH A 117 1217 68 HOH HOH . C 3 HOH A 118 1218 73 HOH HOH . C 3 HOH A 119 1219 75 HOH HOH . C 3 HOH A 120 1220 76 HOH HOH . C 3 HOH A 121 1221 79 HOH HOH . C 3 HOH A 122 1222 82 HOH HOH . C 3 HOH A 123 1223 84 HOH HOH . C 3 HOH A 124 1224 85 HOH HOH . C 3 HOH A 125 1225 86 HOH HOH . C 3 HOH A 126 1226 87 HOH HOH . C 3 HOH A 127 1227 88 HOH HOH . C 3 HOH A 128 1228 89 HOH HOH . C 3 HOH A 129 1229 90 HOH HOH . C 3 HOH A 130 1230 92 HOH HOH . C 3 HOH A 131 1231 93 HOH HOH . C 3 HOH A 132 1232 94 HOH HOH . C 3 HOH A 133 1233 96 HOH HOH . C 3 HOH A 134 1234 97 HOH HOH . C 3 HOH A 135 1235 99 HOH HOH . C 3 HOH A 136 1236 100 HOH HOH . C 3 HOH A 137 1237 102 HOH HOH . C 3 HOH A 138 1238 103 HOH HOH . C 3 HOH A 139 1239 105 HOH HOH . C 3 HOH A 140 1240 107 HOH HOH . C 3 HOH A 141 1241 111 HOH HOH . C 3 HOH A 142 1242 114 HOH HOH . C 3 HOH A 143 1243 115 HOH HOH . C 3 HOH A 144 1244 119 HOH HOH . C 3 HOH A 145 1245 120 HOH HOH . C 3 HOH A 146 1246 121 HOH HOH . C 3 HOH A 147 1247 122 HOH HOH . C 3 HOH A 148 1248 125 HOH HOH . C 3 HOH A 149 1249 127 HOH HOH . C 3 HOH A 150 1250 130 HOH HOH . C 3 HOH A 151 1251 131 HOH HOH . C 3 HOH A 152 1252 136 HOH HOH . C 3 HOH A 153 1253 137 HOH HOH . C 3 HOH A 154 1254 138 HOH HOH . C 3 HOH A 155 1255 139 HOH HOH . C 3 HOH A 156 1256 140 HOH HOH . C 3 HOH A 157 1257 141 HOH HOH . C 3 HOH A 158 1258 142 HOH HOH . C 3 HOH A 159 1259 143 HOH HOH . C 3 HOH A 160 1260 145 HOH HOH . C 3 HOH A 161 1261 146 HOH HOH . C 3 HOH A 162 1262 147 HOH HOH . C 3 HOH A 163 1263 152 HOH HOH . C 3 HOH A 164 1264 154 HOH HOH . C 3 HOH A 165 1265 156 HOH HOH . C 3 HOH A 166 1266 157 HOH HOH . C 3 HOH A 167 1267 161 HOH HOH . C 3 HOH A 168 1268 163 HOH HOH . C 3 HOH A 169 1269 166 HOH HOH . C 3 HOH A 170 1270 167 HOH HOH . C 3 HOH A 171 1271 168 HOH HOH . C 3 HOH A 172 1272 170 HOH HOH . C 3 HOH A 173 1273 172 HOH HOH . C 3 HOH A 174 1274 173 HOH HOH . C 3 HOH A 175 1275 175 HOH HOH . C 3 HOH A 176 1276 176 HOH HOH . C 3 HOH A 177 1277 177 HOH HOH . C 3 HOH A 178 1278 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B96 . . . B 2 -0.087 -4.86 -16.198 1 21.13 ? C1 B96 1001 A 1 HETATM 2 O O1 B96 . . . B 2 -1.146 -5.282 -15.754 1 18.81 ? O1 B96 1001 A 1 HETATM 3 N N2 B96 . . . B 2 1.04 -5.579 -16.141 1 18.93 ? N2 B96 1001 A 1 HETATM 4 C C3 B96 . . . B 2 1.176 -6.866 -15.743 1 22.06 ? C3 B96 1001 A 1 HETATM 5 C C4 B96 . . . B 2 2.49 -7.227 -15.153 1 20.38 ? C4 B96 1001 A 1 HETATM 6 C C5 B96 . . . B 2 2.71 -8.612 -14.713 1 24.88 ? C5 B96 1001 A 1 HETATM 7 C C6 B96 . . . B 2 1.609 -9.573 -14.868 1 28.4 ? C6 B96 1001 A 1 HETATM 8 C C31 B96 . . . B 2 3.502 -6.297 -15.011 1 19.14 ? C31 B96 1001 A 1 HETATM 9 C C32 B96 . . . B 2 4.715 -6.704 -14.447 1 23.86 ? C32 B96 1001 A 1 HETATM 10 C C33 B96 . . . B 2 4.913 -8.021 -14.026 1 24.1 ? C33 B96 1001 A 1 HETATM 11 C C34 B96 . . . B 2 3.926 -8.988 -14.147 1 22.6 ? C34 B96 1001 A 1 HETATM 12 C C7 B96 . . . B 2 0.399 -9.178 -15.434 1 25.07 ? C7 B96 1001 A 1 HETATM 13 C C8 B96 . . . B 2 0.191 -7.851 -15.856 1 21.4 ? C8 B96 1001 A 1 HETATM 14 N N9 B96 . . . B 2 0.017 -3.645 -16.748 1 17.21 ? N9 B96 1001 A 1 HETATM 15 C C10 B96 . . . B 2 -0.967 -2.724 -16.591 1 15.89 ? C10 B96 1001 A 1 HETATM 16 C C14 B96 . . . B 2 -2.009 -2.58 -15.671 1 17.07 ? C14 B96 1001 A 1 HETATM 17 C C13 B96 . . . B 2 -2.626 -1.404 -16.085 1 16.87 ? C13 B96 1001 A 1 HETATM 18 N N12 B96 . . . B 2 -2.069 -0.804 -17.155 1 17.16 ? N12 B96 1001 A 1 HETATM 19 N N11 B96 . . . B 2 -1.022 -1.669 -17.435 1 20.52 ? N11 B96 1001 A 1 HETATM 20 C C15 B96 . . . B 2 -0.206 -1.372 -18.455 1 19.01 ? C15 B96 1001 A 1 HETATM 21 C C17 B96 . . . B 2 -4.196 0.474 -16.112 1 27.32 ? C17 B96 1001 A 1 HETATM 22 C C18 B96 . . . B 2 -4.971 -1.823 -15.46 1 27.73 ? C18 B96 1001 A 1 HETATM 23 C C19 B96 . . . B 2 -3.484 -0.5 -13.957 1 25.65 ? C19 B96 1001 A 1 HETATM 24 C C16 B96 . . . B 2 -3.827 -0.821 -15.402 1 19.39 ? C16 B96 1001 A 1 HETATM 25 C C20 B96 . . . B 2 0.205 -0.046 -18.633 1 23.31 ? C20 B96 1001 A 1 HETATM 26 C C21 B96 . . . B 2 1.05 0.356 -19.662 1 23.58 ? C21 B96 1001 A 1 HETATM 27 C C22 B96 . . . B 2 1.518 -0.594 -20.558 1 23.71 ? C22 B96 1001 A 1 HETATM 28 C C23 B96 . . . B 2 1.148 -1.92 -20.411 1 23.1 ? C23 B96 1001 A 1 HETATM 29 C C24 B96 . . . B 2 0.292 -2.286 -19.383 1 21.5 ? C24 B96 1001 A 1 HETATM 30 C C25 B96 . . . B 2 2.437 -0.204 -21.684 1 34.18 ? C25 B96 1001 A 1 HETATM 31 O O41 B96 . . . B 2 1.838 -10.848 -14.452 1 32.4 ? O41 B96 1001 A 1 HETATM 32 C C42 B96 . . . B 2 1.228 -11.925 -15.146 1 33.53 ? C42 B96 1001 A 1 HETATM 33 C C43 B96 . . . B 2 1.872 -13.207 -14.643 1 36.08 ? C43 B96 1001 A 1 HETATM 34 N N44 B96 . . . B 2 1.025 -13.753 -13.583 1 27.42 ? N44 B96 1001 A 1 HETATM 35 C C45 B96 . . . B 2 1.611 -15.03 -13.161 1 37.15 ? C45 B96 1001 A 1 HETATM 36 C C46 B96 . . . B 2 0.698 -15.717 -12.158 0.7 35.27 ? C46 B96 1001 A 1 HETATM 37 O O47 B96 . . . B 2 -0.574 -15.92 -12.768 0.18 28.5 ? O47 B96 1001 A 1 HETATM 38 C C48 B96 . . . B 2 -1.172 -14.675 -13.123 0.39 29.43 ? C48 B96 1001 A 1 HETATM 39 C C49 B96 . . . B 2 -0.303 -13.984 -14.158 0.86 36.15 ? C49 B96 1001 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 39 #