data_4TWT # _model_server_result.job_id RuY7wXakat_KWgKiFcsLEw _model_server_result.datetime_utc '2025-03-12 05:48:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4twt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":103}' # _entry.id 4TWT # _exptl.entry_id 4TWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 210.27 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2,4,6-trimethylbenzene-1,3,5-triyl)trimethanol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TWT _cell.length_a 78.444 _cell.length_b 78.444 _cell.length_c 230.375 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA Trimeric 3 software_defined_assembly 1 PISA Trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,O,P,Q 1 1 D,E,F,L,M,N,R,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? disulf ? disulf2 B SG CYS 69 B CYS 69 1_555 B SG CYS 101 B CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? disulf ? disulf3 E SG CYS 69 C CYS 69 1_555 E SG CYS 101 C CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf4 F SG CYS 69 D CYS 69 1_555 F SG CYS 101 D CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 C SG CYS 2 E CYS 2 1_555 K CAK 38A . E 38A 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.661 ? covale ? covale2 C SG CYS 5 E CYS 5 1_555 K CAJ 38A . E 38A 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.683 ? covale ? covale3 C SG CYS 11 E CYS 11 1_555 K CAL 38A . E 38A 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.664 ? covale ? covale4 D SG CYS 2 F CYS 2 1_555 L CAK 38A . F 38A 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.6 ? covale ? covale5 D SG CYS 5 F CYS 5 1_555 L CAJ 38A . F 38A 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.649 ? covale ? covale6 D SG CYS 11 F CYS 11 1_555 L CAL 38A . F 38A 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.625 ? # _chem_comp.formula 'C12 H18 O3' _chem_comp.formula_weight 210.27 _chem_comp.id 38A _chem_comp.mon_nstd_flag . _chem_comp.name (2,4,6-trimethylbenzene-1,3,5-triyl)trimethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAH CAF 38A sing 1 n n CAL CAE 38A sing 2 n n CAF CAE 38A doub 3 n y CAF CAA 38A sing 4 n y CAE CAD 38A sing 5 n y CAJ CAA 38A sing 6 n n CAA CAB 38A doub 7 n y CAD CAI 38A sing 8 n n CAD CAC 38A doub 9 n y CAB CAC 38A sing 10 n y CAB CAG 38A sing 11 n n CAC CAK 38A sing 12 n n CAK H1 38A sing 13 n n CAK H2 38A sing 14 n n CAG H4 38A sing 15 n n CAG H5 38A sing 16 n n CAG H6 38A sing 17 n n CAI H7 38A sing 18 n n CAI H8 38A sing 19 n n CAI H9 38A sing 20 n n CAL H10 38A sing 21 n n CAL H11 38A sing 22 n n CAH H13 38A sing 23 n n CAH H14 38A sing 24 n n CAH H15 38A sing 25 n n CAJ H16 38A sing 26 n n CAJ H17 38A sing 27 n n CAJ O1 38A sing 28 n n CAL O2 38A sing 29 n n CAK O4 38A sing 30 n n O1 H3 38A sing 31 n n O2 H12 38A sing 32 n n O4 H18 38A sing 33 n n # _atom_sites.entry_id 4TWT _atom_sites.fract_transf_matrix[1][1] 0.012748 _atom_sites.fract_transf_matrix[1][2] 0.00736 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL B 1 201 5 GOL GOL . H 3 GOL B 1 202 6 GOL GOL . I 3 GOL E 1 101 1 GOL GOL . J 3 GOL E 1 102 2 GOL GOL . K 4 38A E 1 103 1 38A MNE . L 4 38A F 1 101 1 38A MNE . M 3 GOL C 1 201 3 GOL GOL . N 3 GOL D 1 201 4 GOL GOL . O 5 HOH A 1 201 33 HOH HOH . O 5 HOH A 2 202 49 HOH HOH . O 5 HOH A 3 203 2 HOH HOH . O 5 HOH A 4 204 7 HOH HOH . O 5 HOH A 5 205 21 HOH HOH . O 5 HOH A 6 206 25 HOH HOH . O 5 HOH A 7 207 26 HOH HOH . O 5 HOH A 8 208 38 HOH HOH . O 5 HOH A 9 209 43 HOH HOH . O 5 HOH A 10 210 50 HOH HOH . O 5 HOH A 11 211 54 HOH HOH . O 5 HOH A 12 212 56 HOH HOH . O 5 HOH A 13 213 67 HOH HOH . P 5 HOH B 1 301 29 HOH HOH . P 5 HOH B 2 302 34 HOH HOH . P 5 HOH B 3 303 71 HOH HOH . P 5 HOH B 4 304 3 HOH HOH . P 5 HOH B 5 305 13 HOH HOH . P 5 HOH B 6 306 51 HOH HOH . P 5 HOH B 7 307 62 HOH HOH . P 5 HOH B 8 308 73 HOH HOH . P 5 HOH B 9 309 75 HOH HOH . Q 5 HOH E 1 201 27 HOH HOH . Q 5 HOH E 2 202 42 HOH HOH . R 5 HOH F 1 201 44 HOH HOH . S 5 HOH C 1 301 17 HOH HOH . S 5 HOH C 2 302 12 HOH HOH . S 5 HOH C 3 303 32 HOH HOH . S 5 HOH C 4 304 37 HOH HOH . S 5 HOH C 5 305 52 HOH HOH . S 5 HOH C 6 306 60 HOH HOH . S 5 HOH C 7 307 70 HOH HOH . S 5 HOH C 8 308 74 HOH HOH . T 5 HOH D 1 301 31 HOH HOH . T 5 HOH D 2 302 47 HOH HOH . T 5 HOH D 3 303 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAK 38A . . . K 4 -11.559 69.647 231.26 1 50.45 ? CAK 38A 103 E 1 HETATM 2 C CAC 38A . . . K 4 -11.394 70.901 230.439 1 52.82 ? CAC 38A 103 E 1 HETATM 3 C CAB 38A . . . K 4 -10.141 71.504 230.354 1 50.51 ? CAB 38A 103 E 1 HETATM 4 C CAG 38A . . . K 4 -8.981 70.854 231.054 1 50.32 ? CAG 38A 103 E 1 HETATM 5 C CAD 38A . . . K 4 -12.493 71.493 229.811 1 59.03 ? CAD 38A 103 E 1 HETATM 6 C CAI 38A . . . K 4 -13.858 70.855 229.891 1 59.78 ? CAI 38A 103 E 1 HETATM 7 C CAE 38A . . . K 4 -12.341 72.677 229.105 1 57 ? CAE 38A 103 E 1 HETATM 8 C CAL 38A . . . K 4 -13.596 73.274 228.5 1 56.44 ? CAL 38A 103 E 1 HETATM 9 C CAF 38A . . . K 4 -11.081 73.283 229.032 1 55.92 ? CAF 38A 103 E 1 HETATM 10 C CAH 38A . . . K 4 -10.928 74.555 228.244 1 57.28 ? CAH 38A 103 E 1 HETATM 11 C CAA 38A . . . K 4 -9.97 72.708 229.664 1 57.03 ? CAA 38A 103 E 1 HETATM 12 C CAJ 38A . . . K 4 -8.601 73.41 229.631 1 65.24 ? CAJ 38A 103 E 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #