data_4TXR # _model_server_result.job_id 3lAX3zYKguxBQ7zxBpjmBA _model_server_result.datetime_utc '2024-11-04 23:06:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4txr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":201}' # _entry.id 4TXR # _exptl.entry_id 4TXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.39 _cell.angle_gamma 90 _cell.entry_id 4TXR _cell.length_a 34.197 _cell.length_b 60.567 _cell.length_c 52.048 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 4TXR _atom_sites.fract_transf_matrix[1][1] 0.029242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000197 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019213 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ACT A 1 201 4 ACT ACT . E 5 EDO A 1 202 2 EDO EDO . F 5 EDO A 1 203 3 EDO EDO . G 5 EDO A 1 204 6 EDO EDO . H 5 EDO A 1 205 7 EDO EDO . I 5 EDO A 1 206 19 EDO EDO . J 5 EDO A 1 207 20 EDO EDO . K 5 EDO A 1 208 21 EDO EDO . L 5 EDO A 1 209 31 EDO EDO . M 5 EDO C 1 201 16 EDO EDO . N 6 HOH B 1 201 252 HOH HOH . N 6 HOH B 2 202 225 HOH HOH . N 6 HOH B 3 203 75 HOH HOH . N 6 HOH B 4 204 84 HOH HOH . N 6 HOH B 5 205 168 HOH HOH . N 6 HOH B 6 206 245 HOH HOH . N 6 HOH B 7 207 128 HOH HOH . N 6 HOH B 8 208 40 HOH HOH . N 6 HOH B 9 209 117 HOH HOH . N 6 HOH B 10 210 157 HOH HOH . N 6 HOH B 11 211 202 HOH HOH . N 6 HOH B 12 212 181 HOH HOH . N 6 HOH B 13 213 77 HOH HOH . N 6 HOH B 14 214 144 HOH HOH . N 6 HOH B 15 215 67 HOH HOH . N 6 HOH B 16 216 273 HOH HOH . N 6 HOH B 17 217 167 HOH HOH . N 6 HOH B 18 218 194 HOH HOH . N 6 HOH B 19 219 236 HOH HOH . N 6 HOH B 20 220 209 HOH HOH . N 6 HOH B 21 221 249 HOH HOH . O 6 HOH A 1 301 211 HOH HOH . O 6 HOH A 2 302 268 HOH HOH . O 6 HOH A 3 303 149 HOH HOH . O 6 HOH A 4 304 220 HOH HOH . O 6 HOH A 5 305 85 HOH HOH . O 6 HOH A 6 306 86 HOH HOH . O 6 HOH A 7 307 197 HOH HOH . O 6 HOH A 8 308 34 HOH HOH . O 6 HOH A 9 309 98 HOH HOH . O 6 HOH A 10 310 41 HOH HOH . O 6 HOH A 11 311 183 HOH HOH . O 6 HOH A 12 312 63 HOH HOH . O 6 HOH A 13 313 198 HOH HOH . O 6 HOH A 14 314 115 HOH HOH . O 6 HOH A 15 315 76 HOH HOH . O 6 HOH A 16 316 233 HOH HOH . O 6 HOH A 17 317 60 HOH HOH . O 6 HOH A 18 318 70 HOH HOH . O 6 HOH A 19 319 52 HOH HOH . O 6 HOH A 20 320 83 HOH HOH . O 6 HOH A 21 321 8 HOH HOH . O 6 HOH A 22 322 38 HOH HOH . O 6 HOH A 23 323 122 HOH HOH . O 6 HOH A 24 324 259 HOH HOH . O 6 HOH A 25 325 49 HOH HOH . O 6 HOH A 26 326 4 HOH HOH . O 6 HOH A 27 327 65 HOH HOH . O 6 HOH A 28 328 188 HOH HOH . O 6 HOH A 29 329 199 HOH HOH . O 6 HOH A 30 330 108 HOH HOH . O 6 HOH A 31 331 9 HOH HOH . O 6 HOH A 32 332 93 HOH HOH . O 6 HOH A 33 333 57 HOH HOH . O 6 HOH A 34 334 36 HOH HOH . O 6 HOH A 35 335 140 HOH HOH . O 6 HOH A 36 336 114 HOH HOH . O 6 HOH A 37 337 147 HOH HOH . O 6 HOH A 38 338 3 HOH HOH . O 6 HOH A 39 339 182 HOH HOH . O 6 HOH A 40 340 16 HOH HOH . O 6 HOH A 41 341 143 HOH HOH . O 6 HOH A 42 342 62 HOH HOH . O 6 HOH A 43 343 50 HOH HOH . O 6 HOH A 44 344 145 HOH HOH . O 6 HOH A 45 345 21 HOH HOH . O 6 HOH A 46 346 46 HOH HOH . O 6 HOH A 47 347 210 HOH HOH . O 6 HOH A 48 348 35 HOH HOH . O 6 HOH A 49 349 151 HOH HOH . O 6 HOH A 50 350 172 HOH HOH . O 6 HOH A 51 351 289 HOH HOH . O 6 HOH A 52 352 234 HOH HOH . O 6 HOH A 53 353 139 HOH HOH . O 6 HOH A 54 354 130 HOH HOH . O 6 HOH A 55 355 174 HOH HOH . O 6 HOH A 56 356 207 HOH HOH . O 6 HOH A 57 357 18 HOH HOH . O 6 HOH A 58 358 270 HOH HOH . O 6 HOH A 59 359 187 HOH HOH . O 6 HOH A 60 360 31 HOH HOH . O 6 HOH A 61 361 216 HOH HOH . O 6 HOH A 62 362 253 HOH HOH . O 6 HOH A 63 363 81 HOH HOH . O 6 HOH A 64 364 94 HOH HOH . O 6 HOH A 65 365 148 HOH HOH . O 6 HOH A 66 366 113 HOH HOH . O 6 HOH A 67 367 138 HOH HOH . O 6 HOH A 68 368 73 HOH HOH . O 6 HOH A 69 369 163 HOH HOH . O 6 HOH A 70 370 109 HOH HOH . O 6 HOH A 71 371 286 HOH HOH . O 6 HOH A 72 372 88 HOH HOH . O 6 HOH A 73 373 175 HOH HOH . O 6 HOH A 74 374 20 HOH HOH . O 6 HOH A 75 375 256 HOH HOH . O 6 HOH A 76 376 14 HOH HOH . O 6 HOH A 77 377 285 HOH HOH . O 6 HOH A 78 378 39 HOH HOH . O 6 HOH A 79 379 80 HOH HOH . O 6 HOH A 80 380 231 HOH HOH . O 6 HOH A 81 381 222 HOH HOH . O 6 HOH A 82 382 158 HOH HOH . O 6 HOH A 83 383 66 HOH HOH . O 6 HOH A 84 384 22 HOH HOH . O 6 HOH A 85 385 166 HOH HOH . O 6 HOH A 86 386 176 HOH HOH . O 6 HOH A 87 387 141 HOH HOH . O 6 HOH A 88 388 78 HOH HOH . O 6 HOH A 89 389 235 HOH HOH . O 6 HOH A 90 390 274 HOH HOH . O 6 HOH A 91 391 153 HOH HOH . O 6 HOH A 92 392 56 HOH HOH . O 6 HOH A 93 393 23 HOH HOH . O 6 HOH A 94 394 129 HOH HOH . O 6 HOH A 95 395 171 HOH HOH . O 6 HOH A 96 396 6 HOH HOH . O 6 HOH A 97 397 164 HOH HOH . O 6 HOH A 98 398 180 HOH HOH . O 6 HOH A 99 399 118 HOH HOH . O 6 HOH A 100 400 179 HOH HOH . O 6 HOH A 101 401 212 HOH HOH . O 6 HOH A 102 402 107 HOH HOH . O 6 HOH A 103 403 12 HOH HOH . O 6 HOH A 104 404 61 HOH HOH . O 6 HOH A 105 405 68 HOH HOH . O 6 HOH A 106 406 184 HOH HOH . O 6 HOH A 107 407 134 HOH HOH . O 6 HOH A 108 408 161 HOH HOH . O 6 HOH A 109 409 178 HOH HOH . O 6 HOH A 110 410 26 HOH HOH . O 6 HOH A 111 411 24 HOH HOH . O 6 HOH A 112 412 242 HOH HOH . O 6 HOH A 113 413 136 HOH HOH . O 6 HOH A 114 414 230 HOH HOH . O 6 HOH A 115 415 19 HOH HOH . O 6 HOH A 116 416 218 HOH HOH . O 6 HOH A 117 417 243 HOH HOH . O 6 HOH A 118 418 196 HOH HOH . O 6 HOH A 119 419 74 HOH HOH . O 6 HOH A 120 420 204 HOH HOH . O 6 HOH A 121 421 162 HOH HOH . O 6 HOH A 122 422 124 HOH HOH . O 6 HOH A 123 423 30 HOH HOH . O 6 HOH A 124 424 7 HOH HOH . O 6 HOH A 125 425 280 HOH HOH . O 6 HOH A 126 426 165 HOH HOH . O 6 HOH A 127 427 189 HOH HOH . O 6 HOH A 128 428 240 HOH HOH . O 6 HOH A 129 429 244 HOH HOH . O 6 HOH A 130 430 290 HOH HOH . O 6 HOH A 131 431 241 HOH HOH . O 6 HOH A 132 432 104 HOH HOH . O 6 HOH A 133 433 120 HOH HOH . O 6 HOH A 134 434 267 HOH HOH . O 6 HOH A 135 435 193 HOH HOH . O 6 HOH A 136 436 87 HOH HOH . O 6 HOH A 137 437 227 HOH HOH . O 6 HOH A 138 438 173 HOH HOH . O 6 HOH A 139 439 154 HOH HOH . O 6 HOH A 140 440 232 HOH HOH . O 6 HOH A 141 441 90 HOH HOH . O 6 HOH A 142 442 123 HOH HOH . O 6 HOH A 143 443 208 HOH HOH . O 6 HOH A 144 444 55 HOH HOH . O 6 HOH A 145 445 284 HOH HOH . O 6 HOH A 146 446 177 HOH HOH . O 6 HOH A 147 447 32 HOH HOH . O 6 HOH A 148 448 15 HOH HOH . O 6 HOH A 149 449 43 HOH HOH . O 6 HOH A 150 450 269 HOH HOH . O 6 HOH A 151 451 101 HOH HOH . O 6 HOH A 152 452 247 HOH HOH . O 6 HOH A 153 453 226 HOH HOH . O 6 HOH A 154 454 229 HOH HOH . O 6 HOH A 155 455 48 HOH HOH . O 6 HOH A 156 456 170 HOH HOH . O 6 HOH A 157 457 265 HOH HOH . O 6 HOH A 158 458 44 HOH HOH . O 6 HOH A 159 459 53 HOH HOH . O 6 HOH A 160 460 33 HOH HOH . O 6 HOH A 161 461 160 HOH HOH . O 6 HOH A 162 462 99 HOH HOH . O 6 HOH A 163 463 254 HOH HOH . O 6 HOH A 164 464 82 HOH HOH . O 6 HOH A 165 465 195 HOH HOH . O 6 HOH A 166 466 203 HOH HOH . O 6 HOH A 167 467 132 HOH HOH . O 6 HOH A 168 468 71 HOH HOH . O 6 HOH A 169 469 282 HOH HOH . O 6 HOH A 170 470 288 HOH HOH . O 6 HOH A 171 471 91 HOH HOH . O 6 HOH A 172 472 276 HOH HOH . O 6 HOH A 173 473 255 HOH HOH . O 6 HOH A 174 474 272 HOH HOH . O 6 HOH A 175 475 205 HOH HOH . O 6 HOH A 176 476 191 HOH HOH . O 6 HOH A 177 477 224 HOH HOH . O 6 HOH A 178 478 261 HOH HOH . O 6 HOH A 179 479 258 HOH HOH . O 6 HOH A 180 480 287 HOH HOH . O 6 HOH A 181 481 156 HOH HOH . O 6 HOH A 182 482 102 HOH HOH . O 6 HOH A 183 483 27 HOH HOH . O 6 HOH A 184 484 95 HOH HOH . O 6 HOH A 185 485 251 HOH HOH . O 6 HOH A 186 486 45 HOH HOH . O 6 HOH A 187 487 239 HOH HOH . O 6 HOH A 188 488 246 HOH HOH . O 6 HOH A 189 489 92 HOH HOH . O 6 HOH A 190 490 206 HOH HOH . O 6 HOH A 191 491 263 HOH HOH . P 6 HOH C 1 301 217 HOH HOH . P 6 HOH C 2 302 150 HOH HOH . P 6 HOH C 3 303 72 HOH HOH . P 6 HOH C 4 304 79 HOH HOH . P 6 HOH C 5 305 121 HOH HOH . P 6 HOH C 6 306 221 HOH HOH . P 6 HOH C 7 307 125 HOH HOH . P 6 HOH C 8 308 133 HOH HOH . P 6 HOH C 9 309 264 HOH HOH . P 6 HOH C 10 310 260 HOH HOH . P 6 HOH C 11 311 10 HOH HOH . P 6 HOH C 12 312 110 HOH HOH . P 6 HOH C 13 313 17 HOH HOH . P 6 HOH C 14 314 262 HOH HOH . P 6 HOH C 15 315 137 HOH HOH . P 6 HOH C 16 316 105 HOH HOH . P 6 HOH C 17 317 169 HOH HOH . P 6 HOH C 18 318 106 HOH HOH . P 6 HOH C 19 319 5 HOH HOH . P 6 HOH C 20 320 135 HOH HOH . P 6 HOH C 21 321 64 HOH HOH . P 6 HOH C 22 322 11 HOH HOH . P 6 HOH C 23 323 13 HOH HOH . P 6 HOH C 24 324 28 HOH HOH . P 6 HOH C 25 325 190 HOH HOH . P 6 HOH C 26 326 213 HOH HOH . P 6 HOH C 27 327 97 HOH HOH . P 6 HOH C 28 328 58 HOH HOH . P 6 HOH C 29 329 37 HOH HOH . P 6 HOH C 30 330 219 HOH HOH . P 6 HOH C 31 331 2 HOH HOH . P 6 HOH C 32 332 1 HOH HOH . P 6 HOH C 33 333 69 HOH HOH . P 6 HOH C 34 334 111 HOH HOH . P 6 HOH C 35 335 59 HOH HOH . P 6 HOH C 36 336 192 HOH HOH . P 6 HOH C 37 337 112 HOH HOH . P 6 HOH C 38 338 25 HOH HOH . P 6 HOH C 39 339 146 HOH HOH . P 6 HOH C 40 340 29 HOH HOH . P 6 HOH C 41 341 51 HOH HOH . P 6 HOH C 42 342 215 HOH HOH . P 6 HOH C 43 343 131 HOH HOH . P 6 HOH C 44 344 89 HOH HOH . P 6 HOH C 45 345 103 HOH HOH . P 6 HOH C 46 346 42 HOH HOH . P 6 HOH C 47 347 214 HOH HOH . P 6 HOH C 48 348 142 HOH HOH . P 6 HOH C 49 349 228 HOH HOH . P 6 HOH C 50 350 96 HOH HOH . P 6 HOH C 51 351 152 HOH HOH . P 6 HOH C 52 352 248 HOH HOH . P 6 HOH C 53 353 278 HOH HOH . P 6 HOH C 54 354 275 HOH HOH . P 6 HOH C 55 355 116 HOH HOH . P 6 HOH C 56 356 119 HOH HOH . P 6 HOH C 57 357 127 HOH HOH . P 6 HOH C 58 358 291 HOH HOH . P 6 HOH C 59 359 257 HOH HOH . P 6 HOH C 60 360 155 HOH HOH . P 6 HOH C 61 361 200 HOH HOH . P 6 HOH C 62 362 223 HOH HOH . P 6 HOH C 63 363 100 HOH HOH . P 6 HOH C 64 364 47 HOH HOH . P 6 HOH C 65 365 54 HOH HOH . P 6 HOH C 66 366 126 HOH HOH . P 6 HOH C 67 367 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . M 5 8.904 13.275 21.435 1 42.99 ? C1 EDO 201 C 1 HETATM 2 O O1 EDO . . . M 5 7.622 13.682 21.927 1 42.63 ? O1 EDO 201 C 1 HETATM 3 C C2 EDO . . . M 5 9.418 12.103 22.262 1 42.81 ? C2 EDO 201 C 1 HETATM 4 O O2 EDO . . . M 5 10.85 12.102 22.267 1 43.03 ? O2 EDO 201 C 1 HETATM 5 H H11 EDO . . . M 5 9.606 14.109 21.5 1 51.59 ? H11 EDO 201 C 1 HETATM 6 H H12 EDO . . . M 5 8.821 12.979 20.387 1 51.59 ? H12 EDO 201 C 1 HETATM 7 H HO1 EDO . . . M 5 7.296 14.425 21.402 1 51.15 ? HO1 EDO 201 C 1 HETATM 8 H H21 EDO . . . M 5 9.046 12.184 23.286 1 51.37 ? H21 EDO 201 C 1 HETATM 9 H H22 EDO . . . M 5 9.051 11.166 21.84 1 51.37 ? H22 EDO 201 C 1 HETATM 10 H HO2 EDO . . . M 5 11.17 11.357 22.793 1 51.64 ? HO2 EDO 201 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #