data_4TY1 # _model_server_result.job_id E6k4nr3lBcWI1wjB6a221w _model_server_result.datetime_utc '2024-10-19 17:30:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ty1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4TY1 # _exptl.entry_id 4TY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 374.439 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-tert-butyl-5-[3-(4-cyclopropylpyrimidin-2-yl)-1H-indol-5-yl]-1,3,4-oxadiazol-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4TY1 _cell.length_a 95.081 _cell.length_b 95.081 _cell.length_c 80.842 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TY1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H22 N6 O' _chem_comp.formula_weight 374.439 _chem_comp.id 38W _chem_comp.mon_nstd_flag . _chem_comp.name N-tert-butyl-5-[3-(4-cyclopropylpyrimidin-2-yl)-1H-indol-5-yl]-1,3,4-oxadiazol-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 38W doub 1 n y C13 C14 38W sing 2 n y C12 C11 38W sing 3 n y N08 N07 38W sing 4 n y N08 C09 38W doub 5 n y N15 C14 38W sing 6 n y N15 C16 38W sing 7 n y C14 C27 38W doub 8 n y N07 C06 38W doub 9 n y C11 C09 38W sing 10 n n C11 C28 38W doub 11 n y C09 O10 38W sing 12 n y C16 C17 38W doub 13 n y C27 C28 38W sing 14 n y C27 C17 38W sing 15 n y C06 O10 38W sing 16 n y C06 N05 38W sing 17 n n C17 C18 38W sing 18 n n N05 C02 38W sing 19 n n C18 N19 38W doub 20 n y C18 N23 38W sing 21 n y N19 C20 38W sing 22 n y C02 C03 38W sing 23 n n C02 C04 38W sing 24 n n C02 C01 38W sing 25 n n N23 C22 38W doub 26 n y C20 C21 38W doub 27 n y C22 C21 38W sing 28 n y C22 C24 38W sing 29 n n C26 C25 38W sing 30 n n C26 C24 38W sing 31 n n C25 C24 38W sing 32 n n C01 H1 38W sing 33 n n C01 H2 38W sing 34 n n C01 H3 38W sing 35 n n C03 H4 38W sing 36 n n C03 H5 38W sing 37 n n C03 H6 38W sing 38 n n C04 H7 38W sing 39 n n C04 H8 38W sing 40 n n C04 H9 38W sing 41 n n N05 H10 38W sing 42 n n C12 H11 38W sing 43 n n C13 H12 38W sing 44 n n N15 H13 38W sing 45 n n C16 H14 38W sing 46 n n C20 H15 38W sing 47 n n C21 H16 38W sing 48 n n C24 H17 38W sing 49 n n C25 H18 38W sing 50 n n C25 H19 38W sing 51 n n C26 H20 38W sing 52 n n C26 H21 38W sing 53 n n C28 H22 38W sing 54 n n # _atom_sites.entry_id 4TY1 _atom_sites.fract_transf_matrix[1][1] 0.010517 _atom_sites.fract_transf_matrix[1][2] 0.006072 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012144 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 38W A 1 401 1 38W UNL . C 3 GOL A 1 402 2 GOL GOL . D 4 HOH A 1 501 19 HOH HOH . D 4 HOH A 2 502 14 HOH HOH . D 4 HOH A 3 503 35 HOH HOH . D 4 HOH A 4 504 34 HOH HOH . D 4 HOH A 5 505 16 HOH HOH . D 4 HOH A 6 506 22 HOH HOH . D 4 HOH A 7 507 4 HOH HOH . D 4 HOH A 8 508 15 HOH HOH . D 4 HOH A 9 509 1 HOH HOH . D 4 HOH A 10 510 2 HOH HOH . D 4 HOH A 11 511 3 HOH HOH . D 4 HOH A 12 512 5 HOH HOH . D 4 HOH A 13 513 6 HOH HOH . D 4 HOH A 14 514 7 HOH HOH . D 4 HOH A 15 515 8 HOH HOH . D 4 HOH A 16 516 9 HOH HOH . D 4 HOH A 17 517 10 HOH HOH . D 4 HOH A 18 518 11 HOH HOH . D 4 HOH A 19 519 12 HOH HOH . D 4 HOH A 20 520 13 HOH HOH . D 4 HOH A 21 521 17 HOH HOH . D 4 HOH A 22 522 18 HOH HOH . D 4 HOH A 23 523 20 HOH HOH . D 4 HOH A 24 524 21 HOH HOH . D 4 HOH A 25 525 23 HOH HOH . D 4 HOH A 26 526 24 HOH HOH . D 4 HOH A 27 527 25 HOH HOH . D 4 HOH A 28 528 26 HOH HOH . D 4 HOH A 29 529 27 HOH HOH . D 4 HOH A 30 530 28 HOH HOH . D 4 HOH A 31 531 29 HOH HOH . D 4 HOH A 32 532 30 HOH HOH . D 4 HOH A 33 533 31 HOH HOH . D 4 HOH A 34 534 32 HOH HOH . D 4 HOH A 35 535 33 HOH HOH . D 4 HOH A 36 536 36 HOH HOH . D 4 HOH A 37 537 37 HOH HOH . D 4 HOH A 38 538 38 HOH HOH . D 4 HOH A 39 539 39 HOH HOH . D 4 HOH A 40 540 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 38W . . . B 2 -19.436 29.035 3.656 1 29.93 ? C01 38W 401 A 1 HETATM 2 C C02 38W . . . B 2 -19.969 30.277 2.889 1 31.29 ? C02 38W 401 A 1 HETATM 3 C C03 38W . . . B 2 -21.451 30.539 3.21 1 31.66 ? C03 38W 401 A 1 HETATM 4 C C04 38W . . . B 2 -19.14 31.51 3.284 1 30.36 ? C04 38W 401 A 1 HETATM 5 N N05 38W . . . B 2 -19.854 30 1.478 1 30.89 ? N05 38W 401 A 1 HETATM 6 C C06 38W . . . B 2 -20.183 30.976 0.5 1 30.07 ? C06 38W 401 A 1 HETATM 7 N N07 38W . . . B 2 -20.056 30.791 -0.821 1 30.09 ? N07 38W 401 A 1 HETATM 8 N N08 38W . . . B 2 -20.453 31.917 -1.451 1 30.29 ? N08 38W 401 A 1 HETATM 9 C C09 38W . . . B 2 -20.845 32.798 -0.508 1 32.07 ? C09 38W 401 A 1 HETATM 10 O O10 38W . . . B 2 -20.666 32.224 0.722 1 32.63 ? O10 38W 401 A 1 HETATM 11 C C11 38W . . . B 2 -21.291 34.096 -0.77 1 32.9 ? C11 38W 401 A 1 HETATM 12 C C12 38W . . . B 2 -21.408 34.521 -2.109 1 33.76 ? C12 38W 401 A 1 HETATM 13 C C13 38W . . . B 2 -21.83 35.811 -2.399 1 34.46 ? C13 38W 401 A 1 HETATM 14 C C14 38W . . . B 2 -22.128 36.706 -1.331 1 36.49 ? C14 38W 401 A 1 HETATM 15 N N15 38W . . . B 2 -22.558 38.018 -1.369 1 39.17 ? N15 38W 401 A 1 HETATM 16 C C16 38W . . . B 2 -22.727 38.46 -0.091 1 40.14 ? C16 38W 401 A 1 HETATM 17 C C17 38W . . . B 2 -22.376 37.444 0.81 1 36.98 ? C17 38W 401 A 1 HETATM 18 C C18 38W . . . B 2 -22.489 37.524 2.205 1 36.23 ? C18 38W 401 A 1 HETATM 19 N N19 38W . . . B 2 -22.988 38.645 2.817 1 37.84 ? N19 38W 401 A 1 HETATM 20 C C20 38W . . . B 2 -23.156 38.701 4.177 1 36.35 ? C20 38W 401 A 1 HETATM 21 C C21 38W . . . B 2 -22.862 37.572 4.952 1 35.09 ? C21 38W 401 A 1 HETATM 22 C C22 38W . . . B 2 -22.387 36.425 4.293 1 36.78 ? C22 38W 401 A 1 HETATM 23 N N23 38W . . . B 2 -22.226 36.429 2.947 1 36.03 ? N23 38W 401 A 1 HETATM 24 C C24 38W . . . B 2 -21.991 35.151 5.014 1 36.85 ? C24 38W 401 A 1 HETATM 25 C C25 38W . . . B 2 -22.415 33.693 4.962 1 37.95 ? C25 38W 401 A 1 HETATM 26 C C26 38W . . . B 2 -21.113 34.122 4.323 1 37.09 ? C26 38W 401 A 1 HETATM 27 C C27 38W . . . B 2 -22.011 36.312 -0.006 1 36.17 ? C27 38W 401 A 1 HETATM 28 C C28 38W . . . B 2 -21.57 34.98 0.282 1 34.88 ? C28 38W 401 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #