data_4TY6
#
_model_server_result.job_id            K3Ffa3f289ws8SmPf_462w 
_model_server_result.datetime_utc      '2024-11-30 19:55:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ty6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":309}' 
#
_entry.id    4TY6 
#
_exptl.entry_id    4TY6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4TY6 
_cell.length_a            79.3 
_cell.length_b            79.3 
_cell.length_c            106.6 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TY6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 113 A CYS 122 1_555 B SG CYS 11 H CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf4 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf5 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.036 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 150 n n 
C1 C2 EDO sing 151 n n 
C1 H11 EDO sing 152 n n 
C1 H12 EDO sing 153 n n 
O1 HO1 EDO sing 154 n n 
C2 O2 EDO sing 155 n n 
C2 H21 EDO sing 156 n n 
C2 H22 EDO sing 157 n n 
O2 HO2 EDO sing 158 n n 
#
_atom_sites.entry_id                     4TY6 
_atom_sites.fract_transf_matrix[1][1]    0.01261 
_atom_sites.fract_transf_matrix[1][2]    0.007281 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014561 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009381 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 39D A 1 301 1 39D LG1 . 
D 4 SO4 A 1 302 2 SO4 SO4 . 
E 5 EDO A 1 303 3 EDO EDO . 
F 5 EDO A 1 304 4 EDO EDO . 
G 5 EDO A 1 305 7 EDO EDO . 
H 5 EDO A 1 306 8 EDO EDO . 
I 5 EDO A 1 307 11 EDO EDO . 
J 5 EDO A 1 308 13 EDO EDO . 
K 5 EDO A 1 309 15 EDO EDO . 
L 5 EDO A 1 310 17 EDO EDO . 
M 6 HOH A 1 401 213 HOH HOH . 
M 6 HOH A 2 402 20 HOH HOH . 
M 6 HOH A 3 403 219 HOH HOH . 
M 6 HOH A 4 404 88 HOH HOH . 
M 6 HOH A 5 405 52 HOH HOH . 
M 6 HOH A 6 406 221 HOH HOH . 
M 6 HOH A 7 407 10 HOH HOH . 
M 6 HOH A 8 408 116 HOH HOH . 
M 6 HOH A 9 409 223 HOH HOH . 
M 6 HOH A 10 410 74 HOH HOH . 
M 6 HOH A 11 411 89 HOH HOH . 
M 6 HOH A 12 412 23 HOH HOH . 
M 6 HOH A 13 413 21 HOH HOH . 
M 6 HOH A 14 414 220 HOH HOH . 
M 6 HOH A 15 415 96 HOH HOH . 
M 6 HOH A 16 416 31 HOH HOH . 
M 6 HOH A 17 417 108 HOH HOH . 
M 6 HOH A 18 418 38 HOH HOH . 
M 6 HOH A 19 419 51 HOH HOH . 
M 6 HOH A 20 420 231 HOH HOH . 
M 6 HOH A 21 421 40 HOH HOH . 
M 6 HOH A 22 422 19 HOH HOH . 
M 6 HOH A 23 423 160 HOH HOH . 
M 6 HOH A 24 424 65 HOH HOH . 
M 6 HOH A 25 425 79 HOH HOH . 
M 6 HOH A 26 426 139 HOH HOH . 
M 6 HOH A 27 427 180 HOH HOH . 
M 6 HOH A 28 428 119 HOH HOH . 
M 6 HOH A 29 429 85 HOH HOH . 
M 6 HOH A 30 430 66 HOH HOH . 
M 6 HOH A 31 431 127 HOH HOH . 
M 6 HOH A 32 432 44 HOH HOH . 
M 6 HOH A 33 433 240 HOH HOH . 
M 6 HOH A 34 434 214 HOH HOH . 
M 6 HOH A 35 435 152 HOH HOH . 
M 6 HOH A 36 436 153 HOH HOH . 
M 6 HOH A 37 437 114 HOH HOH . 
M 6 HOH A 38 438 75 HOH HOH . 
M 6 HOH A 39 439 123 HOH HOH . 
M 6 HOH A 40 440 164 HOH HOH . 
M 6 HOH A 41 441 32 HOH HOH . 
M 6 HOH A 42 442 161 HOH HOH . 
M 6 HOH A 43 443 39 HOH HOH . 
M 6 HOH A 44 444 142 HOH HOH . 
M 6 HOH A 45 445 200 HOH HOH . 
M 6 HOH A 46 446 175 HOH HOH . 
M 6 HOH A 47 447 144 HOH HOH . 
M 6 HOH A 48 448 165 HOH HOH . 
M 6 HOH A 49 449 71 HOH HOH . 
M 6 HOH A 50 450 70 HOH HOH . 
M 6 HOH A 51 451 35 HOH HOH . 
M 6 HOH A 52 452 37 HOH HOH . 
M 6 HOH A 53 453 92 HOH HOH . 
M 6 HOH A 54 454 99 HOH HOH . 
M 6 HOH A 55 455 83 HOH HOH . 
M 6 HOH A 56 456 42 HOH HOH . 
M 6 HOH A 57 457 115 HOH HOH . 
M 6 HOH A 58 458 137 HOH HOH . 
M 6 HOH A 59 459 194 HOH HOH . 
M 6 HOH A 60 460 117 HOH HOH . 
M 6 HOH A 61 461 122 HOH HOH . 
M 6 HOH A 62 462 80 HOH HOH . 
M 6 HOH A 63 463 24 HOH HOH . 
M 6 HOH A 64 464 59 HOH HOH . 
M 6 HOH A 65 465 239 HOH HOH . 
M 6 HOH A 66 466 140 HOH HOH . 
M 6 HOH A 67 467 169 HOH HOH . 
M 6 HOH A 68 468 188 HOH HOH . 
M 6 HOH A 69 469 217 HOH HOH . 
M 6 HOH A 70 470 1 HOH HOH . 
M 6 HOH A 71 471 129 HOH HOH . 
M 6 HOH A 72 472 196 HOH HOH . 
M 6 HOH A 73 473 176 HOH HOH . 
M 6 HOH A 74 474 182 HOH HOH . 
M 6 HOH A 75 475 192 HOH HOH . 
M 6 HOH A 76 476 146 HOH HOH . 
M 6 HOH A 77 477 222 HOH HOH . 
M 6 HOH A 78 478 234 HOH HOH . 
M 6 HOH A 79 479 181 HOH HOH . 
M 6 HOH A 80 480 2 HOH HOH . 
M 6 HOH A 81 481 3 HOH HOH . 
M 6 HOH A 82 482 4 HOH HOH . 
M 6 HOH A 83 483 5 HOH HOH . 
M 6 HOH A 84 484 6 HOH HOH . 
M 6 HOH A 85 485 7 HOH HOH . 
M 6 HOH A 86 486 8 HOH HOH . 
M 6 HOH A 87 487 9 HOH HOH . 
M 6 HOH A 88 488 11 HOH HOH . 
M 6 HOH A 89 489 12 HOH HOH . 
M 6 HOH A 90 490 13 HOH HOH . 
M 6 HOH A 91 491 14 HOH HOH . 
M 6 HOH A 92 492 15 HOH HOH . 
M 6 HOH A 93 493 16 HOH HOH . 
M 6 HOH A 94 494 17 HOH HOH . 
M 6 HOH A 95 495 18 HOH HOH . 
M 6 HOH A 96 496 22 HOH HOH . 
M 6 HOH A 97 497 25 HOH HOH . 
M 6 HOH A 98 498 26 HOH HOH . 
M 6 HOH A 99 499 27 HOH HOH . 
M 6 HOH A 100 500 28 HOH HOH . 
M 6 HOH A 101 501 29 HOH HOH . 
M 6 HOH A 102 502 30 HOH HOH . 
M 6 HOH A 103 503 33 HOH HOH . 
M 6 HOH A 104 504 34 HOH HOH . 
M 6 HOH A 105 505 36 HOH HOH . 
M 6 HOH A 106 506 41 HOH HOH . 
M 6 HOH A 107 507 43 HOH HOH . 
M 6 HOH A 108 508 45 HOH HOH . 
M 6 HOH A 109 509 46 HOH HOH . 
M 6 HOH A 110 510 47 HOH HOH . 
M 6 HOH A 111 511 48 HOH HOH . 
M 6 HOH A 112 512 49 HOH HOH . 
M 6 HOH A 113 513 50 HOH HOH . 
M 6 HOH A 114 514 53 HOH HOH . 
M 6 HOH A 115 515 54 HOH HOH . 
M 6 HOH A 116 516 55 HOH HOH . 
M 6 HOH A 117 517 56 HOH HOH . 
M 6 HOH A 118 518 57 HOH HOH . 
M 6 HOH A 119 519 58 HOH HOH . 
M 6 HOH A 120 520 60 HOH HOH . 
M 6 HOH A 121 521 61 HOH HOH . 
M 6 HOH A 122 522 63 HOH HOH . 
M 6 HOH A 123 523 64 HOH HOH . 
M 6 HOH A 124 524 67 HOH HOH . 
M 6 HOH A 125 525 68 HOH HOH . 
M 6 HOH A 126 526 69 HOH HOH . 
M 6 HOH A 127 527 72 HOH HOH . 
M 6 HOH A 128 528 73 HOH HOH . 
M 6 HOH A 129 529 76 HOH HOH . 
M 6 HOH A 130 530 77 HOH HOH . 
M 6 HOH A 131 531 78 HOH HOH . 
M 6 HOH A 132 532 81 HOH HOH . 
M 6 HOH A 133 533 82 HOH HOH . 
M 6 HOH A 134 534 84 HOH HOH . 
M 6 HOH A 135 535 86 HOH HOH . 
M 6 HOH A 136 536 87 HOH HOH . 
M 6 HOH A 137 537 90 HOH HOH . 
M 6 HOH A 138 538 91 HOH HOH . 
M 6 HOH A 139 539 93 HOH HOH . 
M 6 HOH A 140 540 94 HOH HOH . 
M 6 HOH A 141 541 95 HOH HOH . 
M 6 HOH A 142 542 97 HOH HOH . 
M 6 HOH A 143 543 98 HOH HOH . 
M 6 HOH A 144 544 100 HOH HOH . 
M 6 HOH A 145 545 101 HOH HOH . 
M 6 HOH A 146 546 102 HOH HOH . 
M 6 HOH A 147 547 103 HOH HOH . 
M 6 HOH A 148 548 104 HOH HOH . 
M 6 HOH A 149 549 105 HOH HOH . 
M 6 HOH A 150 550 106 HOH HOH . 
M 6 HOH A 151 551 107 HOH HOH . 
M 6 HOH A 152 552 109 HOH HOH . 
M 6 HOH A 153 553 110 HOH HOH . 
M 6 HOH A 154 554 111 HOH HOH . 
M 6 HOH A 155 555 112 HOH HOH . 
M 6 HOH A 156 556 113 HOH HOH . 
M 6 HOH A 157 557 118 HOH HOH . 
M 6 HOH A 158 558 120 HOH HOH . 
M 6 HOH A 159 559 121 HOH HOH . 
M 6 HOH A 160 560 124 HOH HOH . 
M 6 HOH A 161 561 125 HOH HOH . 
M 6 HOH A 162 562 126 HOH HOH . 
M 6 HOH A 163 563 128 HOH HOH . 
M 6 HOH A 164 564 130 HOH HOH . 
M 6 HOH A 165 565 131 HOH HOH . 
M 6 HOH A 166 566 132 HOH HOH . 
M 6 HOH A 167 567 133 HOH HOH . 
M 6 HOH A 168 568 134 HOH HOH . 
M 6 HOH A 169 569 135 HOH HOH . 
M 6 HOH A 170 570 136 HOH HOH . 
M 6 HOH A 171 571 138 HOH HOH . 
M 6 HOH A 172 572 141 HOH HOH . 
M 6 HOH A 173 573 143 HOH HOH . 
M 6 HOH A 174 574 145 HOH HOH . 
M 6 HOH A 175 575 147 HOH HOH . 
M 6 HOH A 176 576 148 HOH HOH . 
M 6 HOH A 177 577 149 HOH HOH . 
M 6 HOH A 178 578 150 HOH HOH . 
M 6 HOH A 179 579 151 HOH HOH . 
M 6 HOH A 180 580 154 HOH HOH . 
M 6 HOH A 181 581 155 HOH HOH . 
M 6 HOH A 182 582 156 HOH HOH . 
M 6 HOH A 183 583 157 HOH HOH . 
M 6 HOH A 184 584 158 HOH HOH . 
M 6 HOH A 185 585 159 HOH HOH . 
M 6 HOH A 186 586 162 HOH HOH . 
M 6 HOH A 187 587 163 HOH HOH . 
M 6 HOH A 188 588 166 HOH HOH . 
M 6 HOH A 189 589 167 HOH HOH . 
M 6 HOH A 190 590 168 HOH HOH . 
M 6 HOH A 191 591 170 HOH HOH . 
M 6 HOH A 192 592 171 HOH HOH . 
M 6 HOH A 193 593 172 HOH HOH . 
M 6 HOH A 194 594 173 HOH HOH . 
M 6 HOH A 195 595 174 HOH HOH . 
M 6 HOH A 196 596 177 HOH HOH . 
M 6 HOH A 197 597 178 HOH HOH . 
M 6 HOH A 198 598 179 HOH HOH . 
M 6 HOH A 199 599 183 HOH HOH . 
M 6 HOH A 200 600 184 HOH HOH . 
M 6 HOH A 201 601 185 HOH HOH . 
M 6 HOH A 202 602 186 HOH HOH . 
M 6 HOH A 203 603 187 HOH HOH . 
M 6 HOH A 204 604 189 HOH HOH . 
M 6 HOH A 205 605 190 HOH HOH . 
M 6 HOH A 206 606 191 HOH HOH . 
M 6 HOH A 207 607 193 HOH HOH . 
M 6 HOH A 208 608 195 HOH HOH . 
M 6 HOH A 209 609 197 HOH HOH . 
M 6 HOH A 210 610 198 HOH HOH . 
M 6 HOH A 211 611 199 HOH HOH . 
M 6 HOH A 212 612 201 HOH HOH . 
M 6 HOH A 213 613 202 HOH HOH . 
M 6 HOH A 214 614 203 HOH HOH . 
M 6 HOH A 215 615 204 HOH HOH . 
M 6 HOH A 216 616 205 HOH HOH . 
M 6 HOH A 217 617 206 HOH HOH . 
M 6 HOH A 218 618 207 HOH HOH . 
M 6 HOH A 219 619 208 HOH HOH . 
M 6 HOH A 220 620 209 HOH HOH . 
M 6 HOH A 221 621 210 HOH HOH . 
M 6 HOH A 222 622 211 HOH HOH . 
M 6 HOH A 223 623 212 HOH HOH . 
M 6 HOH A 224 624 215 HOH HOH . 
M 6 HOH A 225 625 216 HOH HOH . 
M 6 HOH A 226 626 218 HOH HOH . 
M 6 HOH A 227 627 224 HOH HOH . 
M 6 HOH A 228 628 225 HOH HOH . 
M 6 HOH A 229 629 226 HOH HOH . 
M 6 HOH A 230 630 227 HOH HOH . 
M 6 HOH A 231 631 228 HOH HOH . 
M 6 HOH A 232 632 229 HOH HOH . 
M 6 HOH A 233 633 230 HOH HOH . 
M 6 HOH A 234 634 232 HOH HOH . 
M 6 HOH A 235 635 233 HOH HOH . 
M 6 HOH A 236 636 235 HOH HOH . 
M 6 HOH A 237 637 236 HOH HOH . 
M 6 HOH A 238 638 237 HOH HOH . 
M 6 HOH A 239 639 238 HOH HOH . 
M 6 HOH A 240 640 241 HOH HOH . 
M 6 HOH A 241 641 242 HOH HOH . 
N 6 HOH H 1 401 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 5 27.957 -4.152 25.004 1 46.21 ? C1 EDO 309 A 1 
HETATM 2 O O1 EDO . . . K 5 28.019 -3.337 23.847 1 49.54 ? O1 EDO 309 A 1 
HETATM 3 C C2 EDO . . . K 5 29.364 -4.297 25.581 1 42.74 ? C2 EDO 309 A 1 
HETATM 4 O O2 EDO . . . K 5 30.267 -4.48 24.504 1 40.28 ? O2 EDO 309 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           218 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#