data_4TY8 # _model_server_result.job_id uezJ3ErIAERsYHlXrkHNYg _model_server_result.datetime_utc '2024-11-13 17:02:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ty8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 4TY8 # _exptl.entry_id 4TY8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.169 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-methyl-2H-chromen-2-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4TY8 _cell.length_a 101.937 _cell.length_b 102.07 _cell.length_c 251.925 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4TY8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,F 2 1 C 3 1 D 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C10 H8 O2' _chem_comp.formula_weight 160.169 _chem_comp.id 3AV _chem_comp.mon_nstd_flag . _chem_comp.name 6-methyl-2H-chromen-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C03 3AV doub 1 n y C C08 3AV sing 2 n y C01 C08 3AV sing 3 n n C03 C02 3AV sing 4 n y C08 C06 3AV doub 5 n y C02 O01 3AV sing 6 n n C02 C09 3AV doub 7 n y C06 C09 3AV sing 8 n y O01 C04 3AV sing 9 n n C09 C05 3AV sing 10 n n C04 O 3AV doub 11 n n C04 C07 3AV sing 12 n n C05 C07 3AV doub 13 n n C01 H1 3AV sing 14 n n C01 H2 3AV sing 15 n n C01 H3 3AV sing 16 n n C03 H4 3AV sing 17 n n C05 H5 3AV sing 18 n n C06 H6 3AV sing 19 n n C07 H7 3AV sing 20 n n C H8 3AV sing 21 n n # _atom_sites.entry_id 4TY8 _atom_sites.fract_transf_matrix[1][1] 0.00981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009797 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003969 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 3AV A 1 601 1 3AV LIG . F 3 3AV B 1 601 2 3AV LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 3AV . . . F 3 6.021 -79.014 23.029 1 70.84 ? C01 3AV 601 B 1 HETATM 2 C C02 3AV . . . F 3 2.383 -80.031 21.068 1 75.57 ? C02 3AV 601 B 1 HETATM 3 C C03 3AV . . . F 3 2.962 -80.892 21.996 1 74.9 ? C03 3AV 601 B 1 HETATM 4 C C04 3AV . . . F 3 0.58 -79.662 19.566 1 69.49 ? C04 3AV 601 B 1 HETATM 5 C C05 3AV . . . F 3 2.396 -77.95 19.831 1 77.6 ? C05 3AV 601 B 1 HETATM 6 C C06 3AV . . . F 3 4.181 -78.482 21.42 1 74.61 ? C06 3AV 601 B 1 HETATM 7 C C07 3AV . . . F 3 1.217 -78.361 19.241 1 73.75 ? C07 3AV 601 B 1 HETATM 8 O O01 3AV . . . F 3 1.197 -80.464 20.481 1 70.35 ? O01 3AV 601 B 1 HETATM 9 C C08 3AV . . . F 3 4.751 -79.354 22.342 1 70.94 ? C08 3AV 601 B 1 HETATM 10 C C09 3AV . . . F 3 2.992 -78.807 20.765 1 77.71 ? C09 3AV 601 B 1 HETATM 11 C C 3AV . . . F 3 4.144 -80.559 22.632 1 73.49 ? C 3AV 601 B 1 HETATM 12 O O 3AV . . . F 3 -0.583 -80.083 18.998 1 70.81 ? O 3AV 601 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 114 _model_server_stats.query_time_ms 502 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #