data_4TYB
#
_model_server_result.job_id            Ntg6ZxT0E1jizgB1y7jliQ 
_model_server_result.datetime_utc      '2024-11-16 22:33:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4tyb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":601}' 
#
_entry.id    4TYB 
#
_exptl.entry_id    4TYB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              202.252 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-morpholin-4-yl(phenyl)ethanenitrile 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4TYB 
_cell.length_a            102.45 
_cell.length_b            102.354 
_cell.length_c            251.884 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4TYB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C12 H14 N2 O' 
_chem_comp.formula_weight    202.252 
_chem_comp.id                3B1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-morpholin-4-yl(phenyl)ethanenitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C02 C06 3B1 doub 1 n y 
C02 C10 3B1 sing 2 n y 
C06 C11 3B1 sing 3 n y 
C10 C01 3B1 doub 4 n y 
C11 C04 3B1 doub 5 n y 
C01 C04 3B1 sing 6 n y 
C04 C09 3B1 sing 7 n n 
C09 C08 3B1 sing 8 n n 
C09 N 3B1 sing 9 n n 
C08 N01 3B1 trip 10 n n 
N C 3B1 sing 11 n n 
N C05 3B1 sing 12 n n 
C07 C 3B1 sing 13 n n 
C07 O 3B1 sing 14 n n 
C05 C03 3B1 sing 15 n n 
C03 O 3B1 sing 16 n n 
C10 H1 3B1 sing 17 n n 
C01 H2 3B1 sing 18 n n 
C02 H3 3B1 sing 19 n n 
C03 H4 3B1 sing 20 n n 
C03 H5 3B1 sing 21 n n 
C05 H6 3B1 sing 22 n n 
C05 H7 3B1 sing 23 n n 
C06 H9 3B1 sing 24 n n 
C07 H10 3B1 sing 25 n n 
C07 H11 3B1 sing 26 n n 
C09 H12 3B1 sing 27 n n 
C11 H13 3B1 sing 28 n n 
C H14 3B1 sing 29 n n 
C H15 3B1 sing 30 n n 
#
_atom_sites.entry_id                     4TYB 
_atom_sites.fract_transf_matrix[1][1]    0.009761 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00977 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 3B1 A 1 601 1 3B1 LIG . 
F 2 3B1 B 1 601 2 3B1 LIG . 
G 2 3B1 C 1 601 3 3B1 LIG . 
H 2 3B1 D 1 601 4 3B1 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 3B1 . . . H 2 50.667 -29.337 46.178 1 47.58 ? C10 3B1 601 D 1 
HETATM 2 C C01 3B1 . . . H 2 51.268 -29.793 45.012 1 47.38 ? C01 3B1 601 D 1 
HETATM 3 N N01 3B1 . . . H 2 49.947 -31.607 40.675 1 48.82 ? N01 3B1 601 D 1 
HETATM 4 C C02 3B1 . . . H 2 49.334 -28.85 46.13 1 52.06 ? C02 3B1 601 D 1 
HETATM 5 C C03 3B1 . . . H 2 52.994 -27.75 43.4 1 47.99 ? C03 3B1 601 D 1 
HETATM 6 C C04 3B1 . . . H 2 50.571 -29.777 43.787 1 50.67 ? C04 3B1 601 D 1 
HETATM 7 C C05 3B1 . . . H 2 52.004 -27.948 42.298 1 50.57 ? C05 3B1 601 D 1 
HETATM 8 N N 3B1 . . . H 2 52.044 -29.304 41.763 1 50.72 ? N 3B1 601 D 1 
HETATM 9 C C06 3B1 . . . H 2 48.628 -28.821 44.906 1 53.87 ? C06 3B1 601 D 1 
HETATM 10 C C07 3B1 . . . H 2 54.385 -29.183 42.31 1 46.44 ? C07 3B1 601 D 1 
HETATM 11 C C08 3B1 . . . H 2 50.494 -30.972 41.492 1 49.29 ? C08 3B1 601 D 1 
HETATM 12 C C09 3B1 . . . H 2 51.314 -30.306 42.528 1 50.7 ? C09 3B1 601 D 1 
HETATM 13 O O 3B1 . . . H 2 53.771 -28.863 43.524 1 44.81 ? O 3B1 601 D 1 
HETATM 14 C C11 3B1 . . . H 2 49.231 -29.281 43.731 1 51.66 ? C11 3B1 601 D 1 
HETATM 15 C C 3B1 . . . H 2 53.361 -29.537 41.227 1 48.46 ? C 3B1 601 D 1 
#
_model_server_stats.io_time_ms              140 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    50 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           15 
#