data_4U0I # _model_server_result.job_id 4oA6g_NtL6jfAjrFskN7Fw _model_server_result.datetime_utc '2024-11-22 02:01:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 4U0I # _exptl.entry_id 4U0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 532.559 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4U0I _cell.length_a 70.032 _cell.length_b 70.032 _cell.length_c 129.212 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U0I _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H27 F3 N6 O' _chem_comp.formula_weight 532.559 _chem_comp.id 0LI _chem_comp.mon_nstd_flag . _chem_comp.name '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ponatinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C84 0LI doub 1 n y N1 C1 0LI sing 2 n y N3 C20 0LI sing 3 n n N3 C21 0LI sing 4 n n N3 C24 0LI sing 5 n n C4 C5 0LI sing 6 n n C4 C3 0LI trip 7 n n C5 C6 0LI doub 8 n y C5 C10 0LI sing 9 n y C6 C7 0LI sing 10 n y C6 C11 0LI sing 11 n n C7 C8 0LI doub 12 n y C7 H7 0LI sing 13 n n C8 C9 0LI sing 14 n y C8 H8 0LI sing 15 n n C10 C9 0LI doub 16 n y C10 H10 0LI sing 17 n n C13 N2 0LI sing 18 n n C13 C14 0LI doub 19 n y C13 C18 0LI sing 20 n y C15 C14 0LI sing 21 n y C15 C16 0LI doub 22 n y C15 H15 0LI sing 23 n n C17 C16 0LI sing 24 n y C17 C18 0LI doub 25 n y C17 C19 0LI sing 26 n n C20 C16 0LI sing 27 n n C20 H20 0LI sing 28 n n C20 H20A 0LI sing 29 n n C21 C22 0LI sing 30 n n C21 H21 0LI sing 31 n n C21 H21A 0LI sing 32 n n C22 N4 0LI sing 33 n n C22 H22 0LI sing 34 n n C22 H22A 0LI sing 35 n n C24 C23 0LI sing 36 n n C24 H24 0LI sing 37 n n C24 H24A 0LI sing 38 n n C81 C82 0LI doub 39 n y C81 C84 0LI sing 40 n y C81 H81 0LI sing 41 n n C82 C83 0LI sing 42 n y C82 H82 0LI sing 43 n n C83 N81 0LI doub 44 n y C83 H83 0LI sing 45 n n N81 N82 0LI sing 46 n y N82 C84 0LI sing 47 n y N82 C2 0LI sing 48 n y C1 C2 0LI doub 49 n y C1 H1 0LI sing 50 n n C2 C3 0LI sing 51 n n C9 C12 0LI sing 52 n n C11 H11 0LI sing 53 n n C11 H11A 0LI sing 54 n n C11 H11B 0LI sing 55 n n C12 O1 0LI doub 56 n n C12 N2 0LI sing 57 n n N2 HN2 0LI sing 58 n n C14 H14 0LI sing 59 n n C18 H18 0LI sing 60 n n C19 F1 0LI sing 61 n n C19 F2 0LI sing 62 n n C19 F3 0LI sing 63 n n C23 N4 0LI sing 64 n n C23 H23 0LI sing 65 n n C23 H23A 0LI sing 66 n n C25 N4 0LI sing 67 n n C25 H25 0LI sing 68 n n C25 H25A 0LI sing 69 n n C25 H25B 0LI sing 70 n n # _atom_sites.entry_id 4U0I _atom_sites.fract_transf_matrix[1][1] 0.014279 _atom_sites.fract_transf_matrix[1][2] 0.008244 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016488 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007739 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0LI A 1 1001 1 0LI AP2 . C 3 PO4 A 1 1002 4 PO4 PO4 . D 3 PO4 A 1 1003 5 PO4 PO4 . E 4 HOH A 1 1101 48 HOH WAT . E 4 HOH A 2 1102 131 HOH WAT . E 4 HOH A 3 1103 58 HOH WAT . E 4 HOH A 4 1104 124 HOH WAT . E 4 HOH A 5 1105 59 HOH WAT . E 4 HOH A 6 1106 76 HOH WAT . E 4 HOH A 7 1107 46 HOH WAT . E 4 HOH A 8 1108 114 HOH WAT . E 4 HOH A 9 1109 98 HOH WAT . E 4 HOH A 10 1110 66 HOH WAT . E 4 HOH A 11 1111 102 HOH WAT . E 4 HOH A 12 1112 1 HOH WAT . E 4 HOH A 13 1113 62 HOH WAT . E 4 HOH A 14 1114 77 HOH WAT . E 4 HOH A 15 1115 89 HOH WAT . E 4 HOH A 16 1116 119 HOH WAT . E 4 HOH A 17 1117 79 HOH WAT . E 4 HOH A 18 1118 28 HOH WAT . E 4 HOH A 19 1119 16 HOH WAT . E 4 HOH A 20 1120 8 HOH WAT . E 4 HOH A 21 1121 60 HOH WAT . E 4 HOH A 22 1122 70 HOH WAT . E 4 HOH A 23 1123 120 HOH WAT . E 4 HOH A 24 1124 38 HOH WAT . E 4 HOH A 25 1125 94 HOH WAT . E 4 HOH A 26 1126 41 HOH WAT . E 4 HOH A 27 1127 81 HOH WAT . E 4 HOH A 28 1128 11 HOH WAT . E 4 HOH A 29 1129 116 HOH WAT . E 4 HOH A 30 1130 126 HOH WAT . E 4 HOH A 31 1131 105 HOH WAT . E 4 HOH A 32 1132 108 HOH WAT . E 4 HOH A 33 1133 50 HOH WAT . E 4 HOH A 34 1134 36 HOH WAT . E 4 HOH A 35 1135 127 HOH WAT . E 4 HOH A 36 1136 9 HOH WAT . E 4 HOH A 37 1137 137 HOH WAT . E 4 HOH A 38 1138 6 HOH WAT . E 4 HOH A 39 1139 134 HOH WAT . E 4 HOH A 40 1140 93 HOH WAT . E 4 HOH A 41 1141 91 HOH WAT . E 4 HOH A 42 1142 13 HOH WAT . E 4 HOH A 43 1143 27 HOH WAT . E 4 HOH A 44 1144 37 HOH WAT . E 4 HOH A 45 1145 80 HOH WAT . E 4 HOH A 46 1146 97 HOH WAT . E 4 HOH A 47 1147 2 HOH WAT . E 4 HOH A 48 1148 3 HOH WAT . E 4 HOH A 49 1149 4 HOH WAT . E 4 HOH A 50 1150 5 HOH WAT . E 4 HOH A 51 1151 7 HOH WAT . E 4 HOH A 52 1152 10 HOH WAT . E 4 HOH A 53 1153 12 HOH WAT . E 4 HOH A 54 1154 14 HOH WAT . E 4 HOH A 55 1155 15 HOH WAT . E 4 HOH A 56 1156 17 HOH WAT . E 4 HOH A 57 1157 18 HOH WAT . E 4 HOH A 58 1158 19 HOH WAT . E 4 HOH A 59 1159 20 HOH WAT . E 4 HOH A 60 1160 21 HOH WAT . E 4 HOH A 61 1161 22 HOH WAT . E 4 HOH A 62 1162 23 HOH WAT . E 4 HOH A 63 1163 24 HOH WAT . E 4 HOH A 64 1164 25 HOH WAT . E 4 HOH A 65 1165 26 HOH WAT . E 4 HOH A 66 1166 29 HOH WAT . E 4 HOH A 67 1167 30 HOH WAT . E 4 HOH A 68 1168 31 HOH WAT . E 4 HOH A 69 1169 32 HOH WAT . E 4 HOH A 70 1170 33 HOH WAT . E 4 HOH A 71 1171 34 HOH WAT . E 4 HOH A 72 1172 35 HOH WAT . E 4 HOH A 73 1173 39 HOH WAT . E 4 HOH A 74 1174 40 HOH WAT . E 4 HOH A 75 1175 42 HOH WAT . E 4 HOH A 76 1176 43 HOH WAT . E 4 HOH A 77 1177 44 HOH WAT . E 4 HOH A 78 1178 45 HOH WAT . E 4 HOH A 79 1179 47 HOH WAT . E 4 HOH A 80 1180 49 HOH WAT . E 4 HOH A 81 1181 51 HOH WAT . E 4 HOH A 82 1182 52 HOH WAT . E 4 HOH A 83 1183 53 HOH WAT . E 4 HOH A 84 1184 54 HOH WAT . E 4 HOH A 85 1185 55 HOH WAT . E 4 HOH A 86 1186 56 HOH WAT . E 4 HOH A 87 1187 57 HOH WAT . E 4 HOH A 88 1188 61 HOH WAT . E 4 HOH A 89 1189 63 HOH WAT . E 4 HOH A 90 1190 64 HOH WAT . E 4 HOH A 91 1191 65 HOH WAT . E 4 HOH A 92 1192 67 HOH WAT . E 4 HOH A 93 1193 68 HOH WAT . E 4 HOH A 94 1194 69 HOH WAT . E 4 HOH A 95 1195 71 HOH WAT . E 4 HOH A 96 1196 72 HOH WAT . E 4 HOH A 97 1197 73 HOH WAT . E 4 HOH A 98 1198 74 HOH WAT . E 4 HOH A 99 1199 75 HOH WAT . E 4 HOH A 100 1200 78 HOH WAT . E 4 HOH A 101 1201 82 HOH WAT . E 4 HOH A 102 1202 83 HOH WAT . E 4 HOH A 103 1203 84 HOH WAT . E 4 HOH A 104 1204 85 HOH WAT . E 4 HOH A 105 1205 86 HOH WAT . E 4 HOH A 106 1206 87 HOH WAT . E 4 HOH A 107 1207 90 HOH WAT . E 4 HOH A 108 1208 92 HOH WAT . E 4 HOH A 109 1209 95 HOH WAT . E 4 HOH A 110 1210 96 HOH WAT . E 4 HOH A 111 1211 99 HOH WAT . E 4 HOH A 112 1212 100 HOH WAT . E 4 HOH A 113 1213 101 HOH WAT . E 4 HOH A 114 1214 103 HOH WAT . E 4 HOH A 115 1215 104 HOH WAT . E 4 HOH A 116 1216 106 HOH WAT . E 4 HOH A 117 1217 107 HOH WAT . E 4 HOH A 118 1218 109 HOH WAT . E 4 HOH A 119 1219 110 HOH WAT . E 4 HOH A 120 1220 111 HOH WAT . E 4 HOH A 121 1221 112 HOH WAT . E 4 HOH A 122 1222 113 HOH WAT . E 4 HOH A 123 1223 115 HOH WAT . E 4 HOH A 124 1224 117 HOH WAT . E 4 HOH A 125 1225 118 HOH WAT . E 4 HOH A 126 1226 122 HOH WAT . E 4 HOH A 127 1227 123 HOH WAT . E 4 HOH A 128 1228 125 HOH WAT . E 4 HOH A 129 1229 128 HOH WAT . E 4 HOH A 130 1230 129 HOH WAT . E 4 HOH A 131 1231 130 HOH WAT . E 4 HOH A 132 1232 132 HOH WAT . E 4 HOH A 133 1233 133 HOH WAT . E 4 HOH A 134 1234 135 HOH WAT . E 4 HOH A 135 1235 136 HOH WAT . E 4 HOH A 136 1236 138 HOH WAT . E 4 HOH A 137 1237 139 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0LI . . . B 2 34.545 14.995 38.535 1 21.53 ? N1 0LI 1001 A 1 HETATM 2 N N3 0LI . . . B 2 35.382 6.687 52.587 1 30.48 ? N3 0LI 1001 A 1 HETATM 3 C C4 0LI . . . B 2 35.262 10.905 40.823 1 21.5 ? C4 0LI 1001 A 1 HETATM 4 C C5 0LI . . . B 2 34.938 9.678 41.551 1 19.06 ? C5 0LI 1001 A 1 HETATM 5 C C6 0LI . . . B 2 34.496 8.417 40.913 1 19.91 ? C6 0LI 1001 A 1 HETATM 6 C C7 0LI . . . B 2 34.188 7.255 41.757 1 17.62 ? C7 0LI 1001 A 1 HETATM 7 C C8 0LI . . . B 2 34.319 7.356 43.21 1 19.32 ? C8 0LI 1001 A 1 HETATM 8 C C10 0LI . . . B 2 35.058 9.746 42.955 1 19.95 ? C10 0LI 1001 A 1 HETATM 9 C C13 0LI . . . B 2 34.685 7.709 47.491 1 24.15 ? C13 0LI 1001 A 1 HETATM 10 C C15 0LI . . . B 2 34.957 6.491 49.658 1 24.42 ? C15 0LI 1001 A 1 HETATM 11 C C17 0LI . . . B 2 33.992 8.831 49.656 1 24.28 ? C17 0LI 1001 A 1 HETATM 12 C C20 0LI . . . B 2 34.312 7.48 51.963 1 28.53 ? C20 0LI 1001 A 1 HETATM 13 C C21 0LI . . . B 2 36.74 7.336 52.528 1 31.29 ? C21 0LI 1001 A 1 HETATM 14 C C22 0LI . . . B 2 37.84 6.342 53.032 1 35.47 ? C22 0LI 1001 A 1 HETATM 15 C C24 0LI . . . B 2 35.035 6.199 53.975 1 32.15 ? C24 0LI 1001 A 1 HETATM 16 C C81 0LI . . . B 2 36.824 15.962 37.963 1 23.17 ? C81 0LI 1001 A 1 HETATM 17 C C82 0LI . . . B 2 38.189 15.67 38.102 1 23.56 ? C82 0LI 1001 A 1 HETATM 18 C C83 0LI . . . B 2 38.601 14.442 38.77 1 23.24 ? C83 0LI 1001 A 1 HETATM 19 N N81 0LI . . . B 2 37.765 13.524 39.294 1 22.62 ? N81 0LI 1001 A 1 HETATM 20 N N82 0LI . . . B 2 36.435 13.86 39.134 1 22.53 ? N82 0LI 1001 A 1 HETATM 21 C C84 0LI . . . B 2 35.865 15.031 38.497 1 22.97 ? C84 0LI 1001 A 1 HETATM 22 C C1 0LI . . . B 2 34.223 13.823 39.193 1 23.44 ? C1 0LI 1001 A 1 HETATM 23 C C2 0LI . . . B 2 35.352 13.143 39.549 1 21.6 ? C2 0LI 1001 A 1 HETATM 24 C C3 0LI . . . B 2 35.366 11.94 40.225 1 21.04 ? C3 0LI 1001 A 1 HETATM 25 C C9 0LI . . . B 2 34.76 8.62 43.81 1 20.47 ? C9 0LI 1001 A 1 HETATM 26 C C11 0LI . . . B 2 34.339 8.291 39.386 1 18.27 ? C11 0LI 1001 A 1 HETATM 27 C C12 0LI . . . B 2 34.914 8.835 45.277 1 21.8 ? C12 0LI 1001 A 1 HETATM 28 O O1 0LI . . . B 2 35.078 9.978 45.694 1 20.56 ? O1 0LI 1001 A 1 HETATM 29 N N2 0LI . . . B 2 34.833 7.734 46.067 1 21.64 ? N2 0LI 1001 A 1 HETATM 30 C C14 0LI . . . B 2 35.095 6.535 48.215 1 25.53 ? C14 0LI 1001 A 1 HETATM 31 C C16 0LI . . . B 2 34.414 7.617 50.407 1 26.01 ? C16 0LI 1001 A 1 HETATM 32 C C18 0LI . . . B 2 34.141 8.833 48.236 1 22.8 ? C18 0LI 1001 A 1 HETATM 33 C C19 0LI . . . B 2 33.408 10.107 50.306 1 24.31 ? C19 0LI 1001 A 1 HETATM 34 F F1 0LI . . . B 2 34.354 10.703 51.025 1 23.22 ? F1 0LI 1001 A 1 HETATM 35 F F2 0LI . . . B 2 32.97 10.991 49.412 1 23.17 ? F2 0LI 1001 A 1 HETATM 36 F F3 0LI . . . B 2 32.353 9.79 51.061 1 25.2 ? F3 0LI 1001 A 1 HETATM 37 C C23 0LI . . . B 2 36.19 5.312 54.612 1 33.99 ? C23 0LI 1001 A 1 HETATM 38 C C25 0LI . . . B 2 38.669 5.144 55.012 1 37.63 ? C25 0LI 1001 A 1 HETATM 39 N N4 0LI . . . B 2 37.57 5.944 54.446 1 37.17 ? N4 0LI 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #