data_4U0O # _model_server_result.job_id cGhn6Ncv9grkgpeLf9DjFQ _model_server_result.datetime_utc '2024-12-26 11:00:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u0o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4U0O # _exptl.entry_id 4U0O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U0O _cell.length_a 70.88 _cell.length_b 162.8 _cell.length_c 58.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U0O _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 37 B CYS 37 1_555 C FE2 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc2 A SG CYS 42 B CYS 42 1_555 C FE3 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc3 A SG CYS 48 B CYS 48 1_555 C FE1 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc4 A SG CYS 63 B CYS 63 1_555 B FE4 SF4 . B SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc5 A SG CYS 67 B CYS 67 1_555 B FE3 SF4 . B SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc6 A SG CYS 70 B CYS 70 1_555 B FE2 SF4 . B SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc7 A OG SER 283 B SER 283 1_555 C FE4 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? metalc ? metalc8 B FE1 SF4 . B SF4 301 1_555 D S4 DTT . B DTT 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 344 n n FE1 S3 SF4 sing 345 n n FE1 S4 SF4 sing 346 n n FE2 S1 SF4 sing 347 n n FE2 S3 SF4 sing 348 n n FE2 S4 SF4 sing 349 n n FE3 S1 SF4 sing 350 n n FE3 S2 SF4 sing 351 n n FE3 S4 SF4 sing 352 n n FE4 S1 SF4 sing 353 n n FE4 S2 SF4 sing 354 n n FE4 S3 SF4 sing 355 n n # _atom_sites.entry_id 4U0O _atom_sites.fract_transf_matrix[1][1] 0.014108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017065 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 B 1 301 290 SF4 SF4 . C 2 SF4 B 1 302 291 SF4 SF4 . D 3 DTT B 1 303 1 DTT DTT . E 4 MTA B 1 304 1 MTA MTA . F 5 HOH B 1 401 142 HOH HOH . F 5 HOH B 2 402 175 HOH HOH . F 5 HOH B 3 403 64 HOH HOH . F 5 HOH B 4 404 133 HOH HOH . F 5 HOH B 5 405 48 HOH HOH . F 5 HOH B 6 406 26 HOH HOH . F 5 HOH B 7 407 75 HOH HOH . F 5 HOH B 8 408 99 HOH HOH . F 5 HOH B 9 409 33 HOH HOH . F 5 HOH B 10 410 115 HOH HOH . F 5 HOH B 11 411 63 HOH HOH . F 5 HOH B 12 412 47 HOH HOH . F 5 HOH B 13 413 82 HOH HOH . F 5 HOH B 14 414 112 HOH HOH . F 5 HOH B 15 415 27 HOH HOH . F 5 HOH B 16 416 139 HOH HOH . F 5 HOH B 17 417 60 HOH HOH . F 5 HOH B 18 418 126 HOH HOH . F 5 HOH B 19 419 18 HOH HOH . F 5 HOH B 20 420 95 HOH HOH . F 5 HOH B 21 421 159 HOH HOH . F 5 HOH B 22 422 119 HOH HOH . F 5 HOH B 23 423 32 HOH HOH . F 5 HOH B 24 424 49 HOH HOH . F 5 HOH B 25 425 78 HOH HOH . F 5 HOH B 26 426 13 HOH HOH . F 5 HOH B 27 427 41 HOH HOH . F 5 HOH B 28 428 140 HOH HOH . F 5 HOH B 29 429 168 HOH HOH . F 5 HOH B 30 430 17 HOH HOH . F 5 HOH B 31 431 128 HOH HOH . F 5 HOH B 32 432 53 HOH HOH . F 5 HOH B 33 433 177 HOH HOH . F 5 HOH B 34 434 16 HOH HOH . F 5 HOH B 35 435 138 HOH HOH . F 5 HOH B 36 436 8 HOH HOH . F 5 HOH B 37 437 114 HOH HOH . F 5 HOH B 38 438 136 HOH HOH . F 5 HOH B 39 439 58 HOH HOH . F 5 HOH B 40 440 7 HOH HOH . F 5 HOH B 41 441 34 HOH HOH . F 5 HOH B 42 442 1 HOH HOH . F 5 HOH B 43 443 56 HOH HOH . F 5 HOH B 44 444 73 HOH HOH . F 5 HOH B 45 445 9 HOH HOH . F 5 HOH B 46 446 101 HOH HOH . F 5 HOH B 47 447 127 HOH HOH . F 5 HOH B 48 448 4 HOH HOH . F 5 HOH B 49 449 62 HOH HOH . F 5 HOH B 50 450 20 HOH HOH . F 5 HOH B 51 451 151 HOH HOH . F 5 HOH B 52 452 96 HOH HOH . F 5 HOH B 53 453 100 HOH HOH . F 5 HOH B 54 454 29 HOH HOH . F 5 HOH B 55 455 88 HOH HOH . F 5 HOH B 56 456 11 HOH HOH . F 5 HOH B 57 457 3 HOH HOH . F 5 HOH B 58 458 43 HOH HOH . F 5 HOH B 59 459 37 HOH HOH . F 5 HOH B 60 460 12 HOH HOH . F 5 HOH B 61 461 70 HOH HOH . F 5 HOH B 62 462 69 HOH HOH . F 5 HOH B 63 463 52 HOH HOH . F 5 HOH B 64 464 19 HOH HOH . F 5 HOH B 65 465 134 HOH HOH . F 5 HOH B 66 466 84 HOH HOH . F 5 HOH B 67 467 171 HOH HOH . F 5 HOH B 68 468 54 HOH HOH . F 5 HOH B 69 469 45 HOH HOH . F 5 HOH B 70 470 92 HOH HOH . F 5 HOH B 71 471 150 HOH HOH . F 5 HOH B 72 472 76 HOH HOH . F 5 HOH B 73 473 122 HOH HOH . F 5 HOH B 74 474 42 HOH HOH . F 5 HOH B 75 475 2 HOH HOH . F 5 HOH B 76 476 146 HOH HOH . F 5 HOH B 77 477 55 HOH HOH . F 5 HOH B 78 478 111 HOH HOH . F 5 HOH B 79 479 35 HOH HOH . F 5 HOH B 80 480 110 HOH HOH . F 5 HOH B 81 481 80 HOH HOH . F 5 HOH B 82 482 87 HOH HOH . F 5 HOH B 83 483 77 HOH HOH . F 5 HOH B 84 484 90 HOH HOH . F 5 HOH B 85 485 14 HOH HOH . F 5 HOH B 86 486 25 HOH HOH . F 5 HOH B 87 487 178 HOH HOH . F 5 HOH B 88 488 61 HOH HOH . F 5 HOH B 89 489 30 HOH HOH . F 5 HOH B 90 490 22 HOH HOH . F 5 HOH B 91 491 163 HOH HOH . F 5 HOH B 92 492 39 HOH HOH . F 5 HOH B 93 493 109 HOH HOH . F 5 HOH B 94 494 40 HOH HOH . F 5 HOH B 95 495 132 HOH HOH . F 5 HOH B 96 496 166 HOH HOH . F 5 HOH B 97 497 50 HOH HOH . F 5 HOH B 98 498 153 HOH HOH . F 5 HOH B 99 499 44 HOH HOH . F 5 HOH B 100 500 83 HOH HOH . F 5 HOH B 101 501 104 HOH HOH . F 5 HOH B 102 502 118 HOH HOH . F 5 HOH B 103 503 98 HOH HOH . F 5 HOH B 104 504 103 HOH HOH . F 5 HOH B 105 505 24 HOH HOH . F 5 HOH B 106 506 38 HOH HOH . F 5 HOH B 107 507 36 HOH HOH . F 5 HOH B 108 508 21 HOH HOH . F 5 HOH B 109 509 180 HOH HOH . F 5 HOH B 110 510 6 HOH HOH . F 5 HOH B 111 511 158 HOH HOH . F 5 HOH B 112 512 46 HOH HOH . F 5 HOH B 113 513 113 HOH HOH . F 5 HOH B 114 514 67 HOH HOH . F 5 HOH B 115 515 10 HOH HOH . F 5 HOH B 116 516 23 HOH HOH . F 5 HOH B 117 517 68 HOH HOH . F 5 HOH B 118 518 51 HOH HOH . F 5 HOH B 119 519 141 HOH HOH . F 5 HOH B 120 520 28 HOH HOH . F 5 HOH B 121 521 15 HOH HOH . F 5 HOH B 122 522 65 HOH HOH . F 5 HOH B 123 523 71 HOH HOH . F 5 HOH B 124 524 165 HOH HOH . F 5 HOH B 125 525 5 HOH HOH . F 5 HOH B 126 526 152 HOH HOH . F 5 HOH B 127 527 170 HOH HOH . F 5 HOH B 128 528 131 HOH HOH . F 5 HOH B 129 529 59 HOH HOH . F 5 HOH B 130 530 167 HOH HOH . F 5 HOH B 131 531 147 HOH HOH . F 5 HOH B 132 532 154 HOH HOH . F 5 HOH B 133 533 93 HOH HOH . F 5 HOH B 134 534 120 HOH HOH . F 5 HOH B 135 535 125 HOH HOH . F 5 HOH B 136 536 148 HOH HOH . F 5 HOH B 137 537 81 HOH HOH . F 5 HOH B 138 538 86 HOH HOH . F 5 HOH B 139 539 107 HOH HOH . F 5 HOH B 140 540 121 HOH HOH . F 5 HOH B 141 541 31 HOH HOH . F 5 HOH B 142 542 129 HOH HOH . F 5 HOH B 143 543 89 HOH HOH . F 5 HOH B 144 544 172 HOH HOH . F 5 HOH B 145 545 135 HOH HOH . F 5 HOH B 146 546 156 HOH HOH . F 5 HOH B 147 547 79 HOH HOH . F 5 HOH B 148 548 162 HOH HOH . F 5 HOH B 149 549 117 HOH HOH . F 5 HOH B 150 550 102 HOH HOH . F 5 HOH B 151 551 161 HOH HOH . F 5 HOH B 152 552 164 HOH HOH . F 5 HOH B 153 553 94 HOH HOH . F 5 HOH B 154 554 91 HOH HOH . F 5 HOH B 155 555 124 HOH HOH . F 5 HOH B 156 556 181 HOH HOH . F 5 HOH B 157 557 57 HOH HOH . F 5 HOH B 158 558 143 HOH HOH . F 5 HOH B 159 559 160 HOH HOH . F 5 HOH B 160 560 97 HOH HOH . F 5 HOH B 161 561 144 HOH HOH . F 5 HOH B 162 562 174 HOH HOH . F 5 HOH B 163 563 145 HOH HOH . F 5 HOH B 164 564 85 HOH HOH . F 5 HOH B 165 565 155 HOH HOH . F 5 HOH B 166 566 108 HOH HOH . F 5 HOH B 167 567 157 HOH HOH . F 5 HOH B 168 568 137 HOH HOH . F 5 HOH B 169 569 116 HOH HOH . F 5 HOH B 170 570 74 HOH HOH . F 5 HOH B 171 571 149 HOH HOH . F 5 HOH B 172 572 66 HOH HOH . F 5 HOH B 173 573 106 HOH HOH . F 5 HOH B 174 574 179 HOH HOH . F 5 HOH B 175 575 130 HOH HOH . F 5 HOH B 176 576 105 HOH HOH . F 5 HOH B 177 577 173 HOH HOH . F 5 HOH B 178 578 169 HOH HOH . F 5 HOH B 179 579 176 HOH HOH . F 5 HOH B 180 580 72 HOH HOH . F 5 HOH B 181 581 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 7.858 58.149 29.141 1 34.88 ? FE1 SF4 301 B 1 HETATM 2 FE FE2 SF4 . . . B 2 5.63 58.775 27.476 1 30.28 ? FE2 SF4 301 B 1 HETATM 3 FE FE3 SF4 . . . B 2 6.08 60.201 29.744 1 31.43 ? FE3 SF4 301 B 1 HETATM 4 FE FE4 SF4 . . . B 2 4.949 57.647 29.78 1 32.77 ? FE4 SF4 301 B 1 HETATM 5 S S1 SF4 . . . B 2 4.198 59.503 28.98 1 32.65 ? S1 SF4 301 B 1 HETATM 6 S S2 SF4 . . . B 2 6.575 58.447 30.907 1 33.53 ? S2 SF4 301 B 1 HETATM 7 S S3 SF4 . . . B 2 6.29 56.848 28.21 1 30.88 ? S3 SF4 301 B 1 HETATM 8 S S4 SF4 . . . B 2 7.399 59.965 27.997 1 30.32 ? S4 SF4 301 B 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #