data_4U0S # _model_server_result.job_id m4XUWihlV-5vKq6nc3tZmg _model_server_result.datetime_utc '2024-11-21 18:05:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u0s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 4U0S # _exptl.entry_id 4U0S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.56 _cell.angle_gamma 90 _cell.entry_id 4U0S _cell.length_a 71.04 _cell.length_b 76.01 _cell.length_c 92.03 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U0S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 266 A ASP 367 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc2 C O3B ADP . A ADP 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc3 C O1A ADP . A ADP 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 D MG MG . A MG 502 1_555 I O HOH . A HOH 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 B OD1 ASP 266 B ASP 367 1_555 G MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc6 B OD2 ASP 266 B ASP 367 1_555 G MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc7 F O2B ADP . B ADP 501 1_555 G MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc8 F O1A ADP . B ADP 501 1_555 G MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc9 G MG MG . B MG 502 1_555 J O HOH . B HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc10 G MG MG . B MG 502 1_555 J O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 281 n n O1 HO1 PG4 sing 282 n n C1 C2 PG4 sing 283 n n C1 H11 PG4 sing 284 n n C1 H12 PG4 sing 285 n n C2 O2 PG4 sing 286 n n C2 H21 PG4 sing 287 n n C2 H22 PG4 sing 288 n n O2 C3 PG4 sing 289 n n C3 C4 PG4 sing 290 n n C3 H31 PG4 sing 291 n n C3 H32 PG4 sing 292 n n C4 O3 PG4 sing 293 n n C4 H41 PG4 sing 294 n n C4 H42 PG4 sing 295 n n O3 C5 PG4 sing 296 n n C5 C6 PG4 sing 297 n n C5 H51 PG4 sing 298 n n C5 H52 PG4 sing 299 n n C6 O4 PG4 sing 300 n n C6 H61 PG4 sing 301 n n C6 H62 PG4 sing 302 n n O4 C7 PG4 sing 303 n n C7 C8 PG4 sing 304 n n C7 H71 PG4 sing 305 n n C7 H72 PG4 sing 306 n n C8 O5 PG4 sing 307 n n C8 H81 PG4 sing 308 n n C8 H82 PG4 sing 309 n n O5 HO5 PG4 sing 310 n n # _atom_sites.entry_id 4U0S _atom_sites.fract_transf_matrix[1][1] 0.014077 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004455 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ADP A 1 501 1 ADP ADP . D 3 MG A 1 502 1 MG MG . E 4 PG4 A 1 503 2 PG4 PEG . F 2 ADP B 1 501 2 ADP ADP . G 3 MG B 1 502 2 MG MG . H 4 PG4 B 1 503 1 PG4 PEG . I 5 HOH A 1 601 130 HOH HOH . I 5 HOH A 2 602 124 HOH HOH . I 5 HOH A 3 603 40 HOH HOH . I 5 HOH A 4 604 115 HOH HOH . I 5 HOH A 5 605 42 HOH HOH . I 5 HOH A 6 606 41 HOH HOH . I 5 HOH A 7 607 31 HOH HOH . I 5 HOH A 8 608 10 HOH HOH . I 5 HOH A 9 609 15 HOH HOH . I 5 HOH A 10 610 4 HOH HOH . I 5 HOH A 11 611 5 HOH HOH . I 5 HOH A 12 612 6 HOH HOH . I 5 HOH A 13 613 1 HOH HOH . I 5 HOH A 14 614 2 HOH HOH . I 5 HOH A 15 615 4 HOH HOH . I 5 HOH A 16 616 5 HOH HOH . I 5 HOH A 17 617 6 HOH HOH . I 5 HOH A 18 618 7 HOH HOH . I 5 HOH A 19 619 8 HOH HOH . I 5 HOH A 20 620 9 HOH HOH . I 5 HOH A 21 621 11 HOH HOH . I 5 HOH A 22 622 16 HOH HOH . I 5 HOH A 23 623 17 HOH HOH . I 5 HOH A 24 624 18 HOH HOH . I 5 HOH A 25 625 19 HOH HOH . I 5 HOH A 26 626 20 HOH HOH . I 5 HOH A 27 627 21 HOH HOH . I 5 HOH A 28 628 22 HOH HOH . I 5 HOH A 29 629 23 HOH HOH . I 5 HOH A 30 630 24 HOH HOH . I 5 HOH A 31 631 25 HOH HOH . I 5 HOH A 32 632 26 HOH HOH . I 5 HOH A 33 633 27 HOH HOH . I 5 HOH A 34 634 28 HOH HOH . I 5 HOH A 35 635 30 HOH HOH . I 5 HOH A 36 636 33 HOH HOH . I 5 HOH A 37 637 34 HOH HOH . I 5 HOH A 38 638 35 HOH HOH . I 5 HOH A 39 639 36 HOH HOH . I 5 HOH A 40 640 37 HOH HOH . I 5 HOH A 41 641 38 HOH HOH . I 5 HOH A 42 642 39 HOH HOH . I 5 HOH A 43 643 43 HOH HOH . I 5 HOH A 44 644 44 HOH HOH . I 5 HOH A 45 645 45 HOH HOH . I 5 HOH A 46 646 46 HOH HOH . I 5 HOH A 47 647 47 HOH HOH . I 5 HOH A 48 648 48 HOH HOH . I 5 HOH A 49 649 49 HOH HOH . I 5 HOH A 50 650 51 HOH HOH . I 5 HOH A 51 651 52 HOH HOH . I 5 HOH A 52 652 55 HOH HOH . I 5 HOH A 53 653 57 HOH HOH . I 5 HOH A 54 654 58 HOH HOH . I 5 HOH A 55 655 60 HOH HOH . I 5 HOH A 56 656 61 HOH HOH . I 5 HOH A 57 657 62 HOH HOH . I 5 HOH A 58 658 63 HOH HOH . I 5 HOH A 59 659 65 HOH HOH . I 5 HOH A 60 660 66 HOH HOH . I 5 HOH A 61 661 68 HOH HOH . I 5 HOH A 62 662 69 HOH HOH . I 5 HOH A 63 663 71 HOH HOH . I 5 HOH A 64 664 74 HOH HOH . I 5 HOH A 65 665 75 HOH HOH . I 5 HOH A 66 666 77 HOH HOH . I 5 HOH A 67 667 78 HOH HOH . I 5 HOH A 68 668 79 HOH HOH . I 5 HOH A 69 669 82 HOH HOH . I 5 HOH A 70 670 84 HOH HOH . I 5 HOH A 71 671 87 HOH HOH . I 5 HOH A 72 672 89 HOH HOH . I 5 HOH A 73 673 91 HOH HOH . I 5 HOH A 74 674 92 HOH HOH . I 5 HOH A 75 675 94 HOH HOH . I 5 HOH A 76 676 97 HOH HOH . I 5 HOH A 77 677 98 HOH HOH . I 5 HOH A 78 678 99 HOH HOH . I 5 HOH A 79 679 100 HOH HOH . I 5 HOH A 80 680 101 HOH HOH . I 5 HOH A 81 681 102 HOH HOH . I 5 HOH A 82 682 103 HOH HOH . I 5 HOH A 83 683 104 HOH HOH . I 5 HOH A 84 684 105 HOH HOH . I 5 HOH A 85 685 106 HOH HOH . I 5 HOH A 86 686 107 HOH HOH . I 5 HOH A 87 687 108 HOH HOH . I 5 HOH A 88 688 109 HOH HOH . I 5 HOH A 89 689 112 HOH HOH . I 5 HOH A 90 690 113 HOH HOH . I 5 HOH A 91 691 114 HOH HOH . I 5 HOH A 92 692 119 HOH HOH . I 5 HOH A 93 693 121 HOH HOH . I 5 HOH A 94 694 122 HOH HOH . I 5 HOH A 95 695 125 HOH HOH . I 5 HOH A 96 696 126 HOH HOH . I 5 HOH A 97 697 129 HOH HOH . I 5 HOH A 98 698 131 HOH HOH . I 5 HOH A 99 699 132 HOH HOH . I 5 HOH A 100 700 134 HOH HOH . I 5 HOH A 101 701 135 HOH HOH . I 5 HOH A 102 702 136 HOH HOH . I 5 HOH A 103 703 138 HOH HOH . I 5 HOH A 104 704 144 HOH HOH . I 5 HOH A 105 705 146 HOH HOH . I 5 HOH A 106 706 149 HOH HOH . I 5 HOH A 107 707 151 HOH HOH . I 5 HOH A 108 708 153 HOH HOH . I 5 HOH A 109 709 154 HOH HOH . I 5 HOH A 110 710 156 HOH HOH . I 5 HOH A 111 711 157 HOH HOH . I 5 HOH A 112 712 160 HOH HOH . I 5 HOH A 113 713 162 HOH HOH . J 5 HOH B 1 601 95 HOH HOH . J 5 HOH B 2 602 88 HOH HOH . J 5 HOH B 3 603 120 HOH HOH . J 5 HOH B 4 604 158 HOH HOH . J 5 HOH B 5 605 1 HOH HOH . J 5 HOH B 6 606 2 HOH HOH . J 5 HOH B 7 607 3 HOH HOH . J 5 HOH B 8 608 3 HOH HOH . J 5 HOH B 9 609 12 HOH HOH . J 5 HOH B 10 610 13 HOH HOH . J 5 HOH B 11 611 14 HOH HOH . J 5 HOH B 12 612 29 HOH HOH . J 5 HOH B 13 613 32 HOH HOH . J 5 HOH B 14 614 50 HOH HOH . J 5 HOH B 15 615 53 HOH HOH . J 5 HOH B 16 616 54 HOH HOH . J 5 HOH B 17 617 56 HOH HOH . J 5 HOH B 18 618 59 HOH HOH . J 5 HOH B 19 619 64 HOH HOH . J 5 HOH B 20 620 67 HOH HOH . J 5 HOH B 21 621 70 HOH HOH . J 5 HOH B 22 622 72 HOH HOH . J 5 HOH B 23 623 73 HOH HOH . J 5 HOH B 24 624 76 HOH HOH . J 5 HOH B 25 625 80 HOH HOH . J 5 HOH B 26 626 81 HOH HOH . J 5 HOH B 27 627 83 HOH HOH . J 5 HOH B 28 628 85 HOH HOH . J 5 HOH B 29 629 86 HOH HOH . J 5 HOH B 30 630 90 HOH HOH . J 5 HOH B 31 631 93 HOH HOH . J 5 HOH B 32 632 96 HOH HOH . J 5 HOH B 33 633 110 HOH HOH . J 5 HOH B 34 634 111 HOH HOH . J 5 HOH B 35 635 116 HOH HOH . J 5 HOH B 36 636 117 HOH HOH . J 5 HOH B 37 637 118 HOH HOH . J 5 HOH B 38 638 123 HOH HOH . J 5 HOH B 39 639 127 HOH HOH . J 5 HOH B 40 640 128 HOH HOH . J 5 HOH B 41 641 133 HOH HOH . J 5 HOH B 42 642 137 HOH HOH . J 5 HOH B 43 643 139 HOH HOH . J 5 HOH B 44 644 140 HOH HOH . J 5 HOH B 45 645 141 HOH HOH . J 5 HOH B 46 646 142 HOH HOH . J 5 HOH B 47 647 143 HOH HOH . J 5 HOH B 48 648 145 HOH HOH . J 5 HOH B 49 649 147 HOH HOH . J 5 HOH B 50 650 148 HOH HOH . J 5 HOH B 51 651 150 HOH HOH . J 5 HOH B 52 652 152 HOH HOH . J 5 HOH B 53 653 155 HOH HOH . J 5 HOH B 54 654 159 HOH HOH . J 5 HOH B 55 655 161 HOH HOH . J 5 HOH B 56 656 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . H 4 -27.723 -103.565 130.796 1 77.99 ? O1 PG4 503 B 1 HETATM 2 C C1 PG4 . . . H 4 -28.583 -103.925 131.89 1 79.7 ? C1 PG4 503 B 1 HETATM 3 C C2 PG4 . . . H 4 -30.046 -104.056 131.454 1 80.68 ? C2 PG4 503 B 1 HETATM 4 O O2 PG4 . . . H 4 -30.777 -104.856 132.395 1 81.19 ? O2 PG4 503 B 1 HETATM 5 C C3 PG4 . . . H 4 -31.55 -105.902 131.793 1 78.82 ? C3 PG4 503 B 1 HETATM 6 C C4 PG4 . . . H 4 -31.71 -107.076 132.753 1 77.67 ? C4 PG4 503 B 1 HETATM 7 O O3 PG4 . . . H 4 -31.185 -108.274 132.172 1 79.19 ? O3 PG4 503 B 1 HETATM 8 C C5 PG4 . . . H 4 -31.192 -109.418 133.044 1 79.4 ? C5 PG4 503 B 1 HETATM 9 C C6 PG4 . . . H 4 -29.793 -110.053 133.131 1 79.48 ? C6 PG4 503 B 1 HETATM 10 O O4 PG4 . . . H 4 -29.148 -109.867 134.405 1 79.04 ? O4 PG4 503 B 1 HETATM 11 C C7 PG4 . . . H 4 -28.35 -108.677 134.517 1 80.42 ? C7 PG4 503 B 1 HETATM 12 C C8 PG4 . . . H 4 -28.986 -107.699 135.521 1 81.36 ? C8 PG4 503 B 1 HETATM 13 O O5 PG4 . . . H 4 -28.903 -106.331 135.076 1 79.66 ? O5 PG4 503 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #