data_4U15 # _model_server_result.job_id PtJ54OAyqUWNY7apez-RKg _model_server_result.datetime_utc '2024-11-28 13:59:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1202}' # _entry.id 4U15 # _exptl.entry_id 4U15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.54 _cell.angle_gamma 90 _cell.entry_id 4U15 _cell.length_a 152.311 _cell.length_b 184.563 _cell.length_c 52.613 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 85 A CYS 140 1_555 A SG CYS 165 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 357 A CYS 516 1_555 A SG CYS 360 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 85 B CYS 140 1_555 B SG CYS 165 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 357 B CYS 516 1_555 B SG CYS 360 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 289 n n C10 C9 OLC doub 290 n n C10 C11 OLC sing 291 n n C9 C8 OLC sing 292 n n C17 C16 OLC sing 293 z n C11 C12 OLC sing 294 n n C8 C7 OLC sing 295 n n C24 C22 OLC sing 296 n n C24 O25 OLC sing 297 n n C16 C15 OLC sing 298 n n C12 C13 OLC sing 299 n n C7 C6 OLC sing 300 n n C15 C14 OLC sing 301 n n C13 C14 OLC sing 302 n n C6 C5 OLC sing 303 n n C5 C4 OLC sing 304 n n C4 C3 OLC sing 305 n n C3 C2 OLC sing 306 n n C2 C1 OLC sing 307 n n C21 C22 OLC sing 308 n n C21 O20 OLC sing 309 n n C1 O19 OLC doub 310 n n C1 O20 OLC sing 311 n n C22 O23 OLC sing 312 n n C18 H18 OLC sing 313 n n C18 H18A OLC sing 314 n n C18 H18B OLC sing 315 n n C10 H10 OLC sing 316 n n C9 H9 OLC sing 317 n n C17 H17 OLC sing 318 n n C17 H17A OLC sing 319 n n C11 H11 OLC sing 320 n n C11 H11A OLC sing 321 n n C8 H8 OLC sing 322 n n C8 H8A OLC sing 323 n n C24 H24 OLC sing 324 n n C24 H24A OLC sing 325 n n C16 H16 OLC sing 326 n n C16 H16A OLC sing 327 n n C12 H12 OLC sing 328 n n C12 H12A OLC sing 329 n n C7 H7 OLC sing 330 n n C7 H7A OLC sing 331 n n C15 H15 OLC sing 332 n n C15 H15A OLC sing 333 n n C13 H13 OLC sing 334 n n C13 H13A OLC sing 335 n n C6 H6 OLC sing 336 n n C6 H6A OLC sing 337 n n C14 H14 OLC sing 338 n n C14 H14A OLC sing 339 n n C5 H5 OLC sing 340 n n C5 H5A OLC sing 341 n n C4 H4 OLC sing 342 n n C4 H4A OLC sing 343 n n C3 H3 OLC sing 344 n n C3 H3A OLC sing 345 n n C2 H2 OLC sing 346 n n C2 H2A OLC sing 347 n n C21 H21 OLC sing 348 n n C21 H21A OLC sing 349 n n C22 H22 OLC sing 350 n n O25 HO25 OLC sing 351 n n O23 HO23 OLC sing 352 n n # _atom_sites.entry_id 4U15 _atom_sites.fract_transf_matrix[1][1] 0.006566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000985 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0HK A 1 2001 2001 0HK AAA . D 3 P6G A 1 2002 6 P6G PEG . E 3 P6G A 1 2003 7 P6G PEG . F 3 P6G A 1 2004 8 P6G PEG . G 4 TAR A 1 2005 1 TAR TAR . H 4 TAR A 1 2006 3 TAR TAR . I 2 0HK B 1 1201 2000 0HK AAA . J 5 OLC B 1 1202 3 OLC DRG . K 5 OLC B 1 1203 4 OLC DRG . L 3 P6G B 1 1204 9 P6G PEG . M 4 TAR B 1 1205 4 TAR TAR . N 4 TAR B 1 1206 5 TAR TAR . O 6 HOH A 1 2101 415 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . J 5 31.845 88.618 67.427 1 113.77 ? C18 OLC 1202 B 1 HETATM 2 C C10 OLC . . . J 5 27.815 90.345 68.745 1 111.04 ? C10 OLC 1202 B 1 HETATM 3 C C9 OLC . . . J 5 27.096 91.699 68.79 1 101.76 ? C9 OLC 1202 B 1 HETATM 4 C C17 OLC . . . J 5 31.882 87.956 66.046 1 98.69 ? C17 OLC 1202 B 1 HETATM 5 C C11 OLC . . . J 5 27.964 89.722 67.351 1 111.17 ? C11 OLC 1202 B 1 HETATM 6 C C8 OLC . . . J 5 26.618 92.233 67.437 1 102.48 ? C8 OLC 1202 B 1 HETATM 7 C C24 OLC . . . J 5 28.702 104.257 70.079 1 120.77 ? C24 OLC 1202 B 1 HETATM 8 C C16 OLC . . . J 5 31.227 86.572 66.107 1 97 ? C16 OLC 1202 B 1 HETATM 9 C C12 OLC . . . J 5 27.384 88.303 67.365 1 101.82 ? C12 OLC 1202 B 1 HETATM 10 C C7 OLC . . . J 5 25.758 93.484 67.634 1 102.98 ? C7 OLC 1202 B 1 HETATM 11 C C15 OLC . . . J 5 29.761 86.686 66.545 1 109.59 ? C15 OLC 1202 B 1 HETATM 12 C C13 OLC . . . J 5 27.51 87.657 65.979 1 92.89 ? C13 OLC 1202 B 1 HETATM 13 C C6 OLC . . . J 5 26.588 94.554 68.348 1 94.25 ? C6 OLC 1202 B 1 HETATM 14 C C14 OLC . . . J 5 28.978 87.55 65.547 1 104.26 ? C14 OLC 1202 B 1 HETATM 15 C C5 OLC . . . J 5 25.767 95.831 68.54 1 102.89 ? C5 OLC 1202 B 1 HETATM 16 C C4 OLC . . . J 5 26.635 96.871 69.254 1 107.13 ? C4 OLC 1202 B 1 HETATM 17 C C3 OLC . . . J 5 27.88 97.148 68.399 1 106.48 ? C3 OLC 1202 B 1 HETATM 18 C C2 OLC . . . J 5 28.822 98.186 69.035 1 99.06 ? C2 OLC 1202 B 1 HETATM 19 C C21 OLC . . . J 5 28.375 101.797 69.747 1 112.95 ? C21 OLC 1202 B 1 HETATM 20 C C1 OLC . . . J 5 28.184 99.575 69.209 1 117.77 ? C1 OLC 1202 B 1 HETATM 21 C C22 OLC . . . J 5 29.408 102.901 69.987 1 114.76 ? C22 OLC 1202 B 1 HETATM 22 O O19 OLC . . . J 5 27.009 99.802 68.926 1 124.4 ? O19 OLC 1202 B 1 HETATM 23 O O25 OLC . . . J 5 29.665 105.293 70.295 1 125.87 ? O25 OLC 1202 B 1 HETATM 24 O O23 OLC . . . J 5 30.1 102.638 71.211 1 124.1 ? O23 OLC 1202 B 1 HETATM 25 O O20 OLC . . . J 5 29.045 100.534 69.649 1 126.98 ? O20 OLC 1202 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #