data_4U15 # _model_server_result.job_id RJhPRH2NWnDoOq2ERFFUvQ _model_server_result.datetime_utc '2024-12-01 05:46:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1204}' # _entry.id 4U15 # _exptl.entry_id 4U15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.54 _cell.angle_gamma 90 _cell.entry_id 4U15 _cell.length_a 152.311 _cell.length_b 184.563 _cell.length_c 52.613 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 85 A CYS 140 1_555 A SG CYS 165 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 357 A CYS 516 1_555 A SG CYS 360 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 85 B CYS 140 1_555 B SG CYS 165 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 357 B CYS 516 1_555 B SG CYS 360 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 353 n n O1 H1 P6G sing 354 n n C2 C3 P6G sing 355 n n C2 H21 P6G sing 356 n n C2 H22 P6G sing 357 n n C3 O4 P6G sing 358 n n C3 H31 P6G sing 359 n n C3 H32 P6G sing 360 n n O4 C5 P6G sing 361 n n C5 C6 P6G sing 362 n n C5 H51 P6G sing 363 n n C5 H52 P6G sing 364 n n C6 O7 P6G sing 365 n n C6 H61 P6G sing 366 n n C6 H62 P6G sing 367 n n O7 C8 P6G sing 368 n n C8 C9 P6G sing 369 n n C8 H81 P6G sing 370 n n C8 H82 P6G sing 371 n n C9 O10 P6G sing 372 n n C9 H91 P6G sing 373 n n C9 H92 P6G sing 374 n n O10 C11 P6G sing 375 n n C11 C12 P6G sing 376 n n C11 H111 P6G sing 377 n n C11 H112 P6G sing 378 n n C12 O13 P6G sing 379 n n C12 H121 P6G sing 380 n n C12 H122 P6G sing 381 n n O13 C14 P6G sing 382 n n C14 C15 P6G sing 383 n n C14 H141 P6G sing 384 n n C14 H142 P6G sing 385 n n C15 O16 P6G sing 386 n n C15 H151 P6G sing 387 n n C15 H152 P6G sing 388 n n O16 C17 P6G sing 389 n n C17 C18 P6G sing 390 n n C17 H171 P6G sing 391 n n C17 H172 P6G sing 392 n n C18 O19 P6G sing 393 n n C18 H181 P6G sing 394 n n C18 H182 P6G sing 395 n n O19 H19 P6G sing 396 n n # _atom_sites.entry_id 4U15 _atom_sites.fract_transf_matrix[1][1] 0.006566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000985 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0HK A 1 2001 2001 0HK AAA . D 3 P6G A 1 2002 6 P6G PEG . E 3 P6G A 1 2003 7 P6G PEG . F 3 P6G A 1 2004 8 P6G PEG . G 4 TAR A 1 2005 1 TAR TAR . H 4 TAR A 1 2006 3 TAR TAR . I 2 0HK B 1 1201 2000 0HK AAA . J 5 OLC B 1 1202 3 OLC DRG . K 5 OLC B 1 1203 4 OLC DRG . L 3 P6G B 1 1204 9 P6G PEG . M 4 TAR B 1 1205 4 TAR TAR . N 4 TAR B 1 1206 5 TAR TAR . O 6 HOH A 1 2101 415 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . L 3 19.271 77.876 55.35 1 131.11 ? O1 P6G 1204 B 1 HETATM 2 C C2 P6G . . . L 3 18.488 77.252 54.328 1 122.15 ? C2 P6G 1204 B 1 HETATM 3 C C3 P6G . . . L 3 17.444 78.248 53.823 1 121.96 ? C3 P6G 1204 B 1 HETATM 4 O O4 P6G . . . L 3 18.107 79.398 53.289 1 116.52 ? O4 P6G 1204 B 1 HETATM 5 C C5 P6G . . . L 3 17.152 80.373 52.859 1 111.86 ? C5 P6G 1204 B 1 HETATM 6 C C6 P6G . . . L 3 16.22 79.762 51.809 1 94.83 ? C6 P6G 1204 B 1 HETATM 7 O O7 P6G . . . L 3 15.255 80.722 51.36 1 104.29 ? O7 P6G 1204 B 1 HETATM 8 C C8 P6G . . . L 3 13.917 80.34 51.716 1 102.26 ? C8 P6G 1204 B 1 HETATM 9 C C9 P6G . . . L 3 13.695 80.533 53.219 1 97.49 ? C9 P6G 1204 B 1 HETATM 10 O O10 P6G . . . L 3 12.363 80.158 53.585 1 94.91 ? O10 P6G 1204 B 1 HETATM 11 C C11 P6G . . . L 3 12.214 80.314 55.001 1 92.42 ? C11 P6G 1204 B 1 HETATM 12 C C12 P6G . . . L 3 13.256 79.448 55.712 1 101.6 ? C12 P6G 1204 B 1 HETATM 13 O O13 P6G . . . L 3 13.051 78.074 55.358 1 125.24 ? O13 P6G 1204 B 1 HETATM 14 C C14 P6G . . . L 3 14.179 77.19 55.521 1 116.07 ? C14 P6G 1204 B 1 HETATM 15 C C15 P6G . . . L 3 14.468 76.817 56.987 1 115.88 ? C15 P6G 1204 B 1 HETATM 16 O O16 P6G . . . L 3 14.803 77.956 57.787 1 122.6 ? O16 P6G 1204 B 1 HETATM 17 C C17 P6G . . . L 3 16.127 78.403 57.459 1 119.4 ? C17 P6G 1204 B 1 HETATM 18 C C18 P6G . . . L 3 17.151 77.346 57.879 1 124.33 ? C18 P6G 1204 B 1 HETATM 19 O O19 P6G . . . L 3 18.467 77.802 57.554 1 108.75 ? O19 P6G 1204 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #