data_4U15 # _model_server_result.job_id HuKYZ_Uuwnhnrx4zSXD48Q _model_server_result.datetime_utc '2024-12-01 05:43:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1205}' # _entry.id 4U15 # _exptl.entry_id 4U15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.54 _cell.angle_gamma 90 _cell.entry_id 4U15 _cell.length_a 152.311 _cell.length_b 184.563 _cell.length_c 52.613 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 85 A CYS 140 1_555 A SG CYS 165 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 357 A CYS 516 1_555 A SG CYS 360 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 85 B CYS 140 1_555 B SG CYS 165 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 357 B CYS 516 1_555 B SG CYS 360 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 450 n n O11 C1 TAR sing 451 n n O11 HO1 TAR sing 452 n n C1 C2 TAR sing 453 n n C2 O2 TAR sing 454 n n C2 C3 TAR sing 455 n n C2 H2 TAR sing 456 n n O2 HO2 TAR sing 457 n n C3 O3 TAR sing 458 n n C3 C4 TAR sing 459 n n C3 H3 TAR sing 460 n n O3 HO3 TAR sing 461 n n C4 O4 TAR doub 462 n n C4 O41 TAR sing 463 n n O41 HO4 TAR sing 464 n n # _atom_sites.entry_id 4U15 _atom_sites.fract_transf_matrix[1][1] 0.006566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000985 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005418 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0HK A 1 2001 2001 0HK AAA . D 3 P6G A 1 2002 6 P6G PEG . E 3 P6G A 1 2003 7 P6G PEG . F 3 P6G A 1 2004 8 P6G PEG . G 4 TAR A 1 2005 1 TAR TAR . H 4 TAR A 1 2006 3 TAR TAR . I 2 0HK B 1 1201 2000 0HK AAA . J 5 OLC B 1 1202 3 OLC DRG . K 5 OLC B 1 1203 4 OLC DRG . L 3 P6G B 1 1204 9 P6G PEG . M 4 TAR B 1 1205 4 TAR TAR . N 4 TAR B 1 1206 5 TAR TAR . O 6 HOH A 1 2101 415 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . M 4 20.35 149.401 66.657 1 84.57 ? O1 TAR 1205 B 1 HETATM 2 O O11 TAR . . . M 4 21.551 149.603 68.52 1 85.31 ? O11 TAR 1205 B 1 HETATM 3 C C1 TAR . . . M 4 20.681 149.986 67.71 1 88.42 ? C1 TAR 1205 B 1 HETATM 4 C C2 TAR . . . M 4 19.933 151.274 68.056 1 92.76 ? C2 TAR 1205 B 1 HETATM 5 O O2 TAR . . . M 4 20.675 152.407 67.591 1 90.62 ? O2 TAR 1205 B 1 HETATM 6 C C3 TAR . . . M 4 18.549 151.243 67.403 1 98.21 ? C3 TAR 1205 B 1 HETATM 7 O O3 TAR . . . M 4 18.682 151.134 65.982 1 121.16 ? O3 TAR 1205 B 1 HETATM 8 C C4 TAR . . . M 4 17.789 152.52 67.76 1 111.92 ? C4 TAR 1205 B 1 HETATM 9 O O4 TAR . . . M 4 17.918 153.494 66.985 1 127.88 ? O4 TAR 1205 B 1 HETATM 10 O O41 TAR . . . M 4 17.1 152.494 68.803 1 122.55 ? O41 TAR 1205 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #