data_4U16
#
_model_server_result.job_id            DF6jNjzcbrtGrjtPY921vw 
_model_server_result.datetime_utc      '2024-11-28 15:55:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u16 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1202}' 
#
_entry.id    4U16 
#
_exptl.entry_id    4U16 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              318.387 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-methyl scopolamine' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.78 
_cell.angle_gamma         90 
_cell.entry_id            4U16 
_cell.length_a            153.391 
_cell.length_b            187.18 
_cell.length_c            53.548 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U16 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D 1 1 
B,E,F,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 85 A CYS 140 1_555 A SG CYS 165 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 357 A CYS 516 1_555 A SG CYS 360 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 85 B CYS 140 1_555 B SG CYS 165 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 B SG CYS 357 B CYS 516 1_555 B SG CYS 360 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C18 H24 N O4 1' 
_chem_comp.formula_weight    318.387 
_chem_comp.id                3C0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-methyl scopolamine' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (1R,2R,4S,5S,7s)-7-{[(2S)-3-hydroxy-2-phenylpropanoyl]oxy}-9,9-dimethyl-3-oxa-9-azoniatricyclo[3.3.1.0~2,4~]nonane 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C07 C06 3C0 doub 1 n y 
C07 C08 3C0 sing 2 n y 
C06 C05 3C0 sing 3 n y 
O18 C16 3C0 sing 4 n n 
O18 C17 3C0 sing 5 n n 
C08 C09 3C0 doub 6 n y 
C05 C04 3C0 doub 7 n y 
C16 C17 3C0 sing 8 n n 
C16 C15 3C0 sing 9 n n 
C17 C22 3C0 sing 10 n n 
C20 N19 3C0 sing 11 n n 
C09 C04 3C0 sing 12 n y 
C04 C03 3C0 sing 13 n n 
C15 N19 3C0 sing 14 n n 
C15 C14 3C0 sing 15 n n 
N19 C22 3C0 sing 16 n n 
N19 C21 3C0 sing 17 n n 
C22 C23 3C0 sing 18 n n 
C03 C10 3C0 sing 19 n n 
C03 C02 3C0 sing 20 n n 
O12 C13 3C0 sing 21 n n 
O12 C02 3C0 sing 22 n n 
C14 C13 3C0 sing 23 n n 
C23 C13 3C0 sing 24 n n 
C10 O11 3C0 sing 25 n n 
C02 O01 3C0 doub 26 n n 
C10 H1 3C0 sing 27 n n 
C10 H2 3C0 sing 28 n n 
C13 H3 3C0 sing 29 n n 
C15 H4 3C0 sing 30 n n 
C17 H5 3C0 sing 31 n n 
C20 H6 3C0 sing 32 n n 
C20 H7 3C0 sing 33 n n 
C20 H8 3C0 sing 34 n n 
C21 H9 3C0 sing 35 n n 
C21 H10 3C0 sing 36 n n 
C21 H11 3C0 sing 37 n n 
C22 H12 3C0 sing 38 n n 
C14 H13 3C0 sing 39 n n 
C14 H14 3C0 sing 40 n n 
C16 H15 3C0 sing 41 n n 
C23 H16 3C0 sing 42 n n 
C23 H17 3C0 sing 43 n n 
C03 H18 3C0 sing 44 n n 
O11 H19 3C0 sing 45 n n 
C05 H20 3C0 sing 46 n n 
C06 H21 3C0 sing 47 n n 
C07 H22 3C0 sing 48 n n 
C08 H23 3C0 sing 49 n n 
C09 H24 3C0 sing 50 n n 
#
_atom_sites.entry_id                     4U16 
_atom_sites.fract_transf_matrix[1][1]    0.006519 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001124 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01895 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TAR A 1 1201 3 TAR TAR . 
D 3 3C0 A 1 1202 1 3C0 LIG . 
E 2 TAR B 1 1201 4 TAR TAR . 
F 2 TAR B 1 1202 5 TAR TAR . 
G 3 3C0 B 1 1203 2 3C0 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 3C0 . . . D 3 -26.723 0.723 6.564 1 119.12 ? C10 3C0 1202 A 1 
HETATM 2 C C13 3C0 . . . D 3 -21.899 0.446 6.683 1 136.59 ? C13 3C0 1202 A 1 
HETATM 3 C C15 3C0 . . . D 3 -20.319 1.37 4.853 1 124.97 ? C15 3C0 1202 A 1 
HETATM 4 C C17 3C0 . . . D 3 -21.281 -0.66 3.985 1 123.43 ? C17 3C0 1202 A 1 
HETATM 5 C C20 3C0 . . . D 3 -18.364 0.115 3.986 1 141.87 ? C20 3C0 1202 A 1 
HETATM 6 C C21 3C0 . . . D 3 -18.513 0.483 6.263 1 163.84 ? C21 3C0 1202 A 1 
HETATM 7 C C22 3C0 . . . D 3 -20.288 -0.85 5.187 1 149.12 ? C22 3C0 1202 A 1 
HETATM 8 N N19 3C0 . . . D 3 -19.353 0.278 5.068 1 147.56 ? N19 3C0 1202 A 1 
HETATM 9 C C14 3C0 . . . D 3 -21.118 1.671 6.148 1 176.7 ? C14 3C0 1202 A 1 
HETATM 10 C C16 3C0 . . . D 3 -21.28 0.838 3.75 1 123.31 ? C16 3C0 1202 A 1 
HETATM 11 O O18 3C0 . . . D 3 -20.835 -0.092 2.711 1 123.53 ? O18 3C0 1202 A 1 
HETATM 12 C C23 3C0 . . . D 3 -21.025 -0.8 6.547 1 125.92 ? C23 3C0 1202 A 1 
HETATM 13 O O12 3C0 . . . D 3 -23.139 0.24 5.998 1 131.8 ? O12 3C0 1202 A 1 
HETATM 14 C C02 3C0 . . . D 3 -24.235 0.577 6.711 1 142.12 ? C02 3C0 1202 A 1 
HETATM 15 O O01 3C0 . . . D 3 -24.327 0.489 7.935 1 129.78 ? O01 3C0 1202 A 1 
HETATM 16 C C03 3C0 . . . D 3 -25.416 1.062 5.858 1 150.74 ? C03 3C0 1202 A 1 
HETATM 17 O O11 3C0 . . . D 3 -26.586 0.986 7.963 1 118.58 ? O11 3C0 1202 A 1 
HETATM 18 C C04 3C0 . . . D 3 -25.409 0.454 4.617 1 159.57 ? C04 3C0 1202 A 1 
HETATM 19 C C05 3C0 . . . D 3 -24.66 1 3.602 1 158.93 ? C05 3C0 1202 A 1 
HETATM 20 C C06 3C0 . . . D 3 -24.628 0.388 2.367 1 118.96 ? C06 3C0 1202 A 1 
HETATM 21 C C07 3C0 . . . D 3 -25.366 -0.75 2.12 1 118.2 ? C07 3C0 1202 A 1 
HETATM 22 C C08 3C0 . . . D 3 -26.128 -1.297 3.136 1 124.58 ? C08 3C0 1202 A 1 
HETATM 23 C C09 3C0 . . . D 3 -26.136 -0.7 4.387 1 152.19 ? C09 3C0 1202 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    43 
_model_server_stats.query_time_ms           554 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           23 
#