data_4U1X
#
_model_server_result.job_id            zd6ALr7XCx0ToIvlkRLrHA 
_model_server_result.datetime_utc      '2024-11-24 03:46:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4u1x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":902}' 
#
_entry.id    4U1X 
#
_exptl.entry_id    4U1X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4U1X 
_cell.length_a            96.52 
_cell.length_b            160.73 
_cell.length_c            338.88 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4U1X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 K N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 54 A CYS 61 1_555 A SG CYS 306 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 711 A CYS 718 1_555 A SG CYS 766 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 B SG CYS 54 B CYS 61 1_555 B SG CYS 306 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 B SG CYS 711 B CYS 718 1_555 B SG CYS 766 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 C SG CYS 54 C CYS 61 1_555 C SG CYS 306 C CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 C SG CYS 711 C CYS 718 1_555 C SG CYS 766 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 D SG CYS 54 D CYS 61 1_555 D SG CYS 306 D CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf8 D SG CYS 711 D CYS 718 1_555 D SG CYS 766 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 A ND2 ASN 346 A ASN 353 1_555 F C1 NAG . A NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale2 B ND2 ASN 346 B ASN 353 1_555 H C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? 
covale ? covale3 C ND2 ASN 346 C ASN 353 1_555 K C1 NAG . C NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? 
covale ? covale4 D ND2 ASN 346 D ASN 353 1_555 M C1 NAG . D NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 359 n n 
C1 O1 NAG sing 360 n n 
C1 O5 NAG sing 361 n n 
C1 H1 NAG sing 362 n n 
C2 C3 NAG sing 363 n n 
C2 N2 NAG sing 364 n n 
C2 H2 NAG sing 365 n n 
C3 C4 NAG sing 366 n n 
C3 O3 NAG sing 367 n n 
C3 H3 NAG sing 368 n n 
C4 C5 NAG sing 369 n n 
C4 O4 NAG sing 370 n n 
C4 H4 NAG sing 371 n n 
C5 C6 NAG sing 372 n n 
C5 O5 NAG sing 373 n n 
C5 H5 NAG sing 374 n n 
C6 O6 NAG sing 375 n n 
C6 H61 NAG sing 376 n n 
C6 H62 NAG sing 377 n n 
C7 C8 NAG sing 378 n n 
C7 N2 NAG sing 379 n n 
C7 O7 NAG doub 380 n n 
C8 H81 NAG sing 381 n n 
C8 H82 NAG sing 382 n n 
C8 H83 NAG sing 383 n n 
N2 HN2 NAG sing 384 n n 
O1 HO1 NAG sing 385 n n 
O3 HO3 NAG sing 386 n n 
O4 HO4 NAG sing 387 n n 
O6 HO6 NAG sing 388 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4U1X 
_atom_sites.fract_transf_matrix[1][1]    0.010361 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006222 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002951 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 KAI A 1 901 999 KAI KAI . 
F 3 NAG A 1 902 1001 NAG NAG . 
G 2 KAI B 1 901 999 KAI KAI . 
H 3 NAG B 1 902 1001 NAG NAG . 
I 4 FWF B 1 903 1 FWF FWF . 
J 2 KAI C 1 901 999 KAI KAI . 
K 3 NAG C 1 902 1001 NAG NAG . 
L 2 KAI D 1 901 999 KAI KAI . 
M 3 NAG D 1 902 1001 NAG NAG . 
N 5 MES D 1 903 1213 MES MES . 
O 4 FWF D 1 904 1 FWF FWF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . K 3 19.076 -33.226 -52.682 1 74.9 ? C1 NAG 902 C 1 
HETATM 2 C C2 NAG . . . K 3 19.086 -32.281 -53.92 1 62.56 ? C2 NAG 902 C 1 
HETATM 3 C C3 NAG . . . K 3 17.698 -32.181 -54.58 1 60.74 ? C3 NAG 902 C 1 
HETATM 4 C C4 NAG . . . K 3 17.041 -33.57 -54.686 1 86.33 ? C4 NAG 902 C 1 
HETATM 5 C C5 NAG . . . K 3 17.024 -34.204 -53.31 1 82.23 ? C5 NAG 902 C 1 
HETATM 6 C C6 NAG . . . K 3 16.31 -35.529 -53.262 1 91.33 ? C6 NAG 902 C 1 
HETATM 7 C C7 NAG . . . K 3 20.025 -30.096 -54.612 1 79.65 ? C7 NAG 902 C 1 
HETATM 8 C C8 NAG . . . K 3 20.574 -28.782 -54.138 1 108.23 ? C8 NAG 902 C 1 
HETATM 9 N N2 NAG . . . K 3 19.669 -30.962 -53.652 1 63.34 ? N2 NAG 902 C 1 
HETATM 10 O O3 NAG . . . K 3 18.067 -31.728 -55.874 1 66.27 ? O3 NAG 902 C 1 
HETATM 11 O O4 NAG . . . K 3 15.783 -33.661 -55.347 1 105.59 ? O4 NAG 902 C 1 
HETATM 12 O O5 NAG . . . K 3 18.388 -34.463 -53.021 1 61.45 ? O5 NAG 902 C 1 
HETATM 13 O O6 NAG . . . K 3 15.218 -35.458 -54.16 1 86.32 ? O6 NAG 902 C 1 
HETATM 14 O O7 NAG . . . K 3 19.811 -30.317 -55.804 1 81.37 ? O7 NAG 902 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    45 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#