data_4U2Q # _model_server_result.job_id d3XZJlJ2Aj3LsmgRetLSDA _model_server_result.datetime_utc '2024-11-04 22:40:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u2q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":901}' # _entry.id 4U2Q # _exptl.entry_id 4U2Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 213.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4U2Q _cell.length_a 104.94 _cell.length_b 148.65 _cell.length_c 337.06 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U2Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 54 A CYS 61 1_555 A SG CYS 306 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 711 A CYS 718 1_555 A SG CYS 766 A CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 54 B CYS 61 1_555 B SG CYS 306 B CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 711 B CYS 718 1_555 B SG CYS 766 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 C SG CYS 54 C CYS 61 1_555 C SG CYS 306 C CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 C SG CYS 711 C CYS 718 1_555 C SG CYS 766 C CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 D SG CYS 54 D CYS 61 1_555 D SG CYS 306 D CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 D SG CYS 711 D CYS 718 1_555 D SG CYS 766 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale1 A ND2 ASN 346 A ASN 353 1_555 F C1 NAG . A NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale2 B ND2 ASN 346 B ASN 353 1_555 H C1 NAG . B NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale3 C ND2 ASN 346 C ASN 353 1_555 J C1 NAG . C NAG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? # _chem_comp.formula 'C10 H15 N O4' _chem_comp.formula_weight 213.23 _chem_comp.id KAI _chem_comp.mon_nstd_flag . _chem_comp.name 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms KAINATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CD KAI sing 171 n n N CA KAI sing 172 n n N HN1 KAI sing 173 n n CD CG KAI sing 174 n n CD HD1 KAI sing 175 n n CD HD2 KAI sing 176 n n CD1 CG2 KAI doub 177 n n CD1 HD11 KAI sing 178 n n CD1 HD12 KAI sing 179 n n CD2 CG2 KAI sing 180 n n CD2 HD21 KAI sing 181 n n CD2 HD22 KAI sing 182 n n CD2 HD23 KAI sing 183 n n CA CB KAI sing 184 n n CA C KAI sing 185 n n CA HA KAI sing 186 n n CB CB1 KAI sing 187 n n CB CG KAI sing 188 n n CB HB KAI sing 189 n n CB1 CG1 KAI sing 190 n n CB1 HB11 KAI sing 191 n n CB1 HB12 KAI sing 192 n n CG CG2 KAI sing 193 n n CG HG KAI sing 194 n n CG1 OD1 KAI sing 195 n n CG1 OD2 KAI doub 196 n n C O KAI doub 197 n n C OXT KAI sing 198 n n OD1 HOD1 KAI sing 199 n n OXT HXT KAI sing 200 n n # _atom_sites.entry_id 4U2Q _atom_sites.fract_transf_matrix[1][1] 0.009529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 KAI A 1 901 999 KAI KAI . F 3 NAG A 1 902 1001 NAG NAG . G 2 KAI B 1 901 999 KAI KAI . H 3 NAG B 1 902 1001 NAG NAG . I 2 KAI C 1 901 999 KAI KAI . J 3 NAG C 1 902 1001 NAG NAG . K 2 KAI D 1 901 999 KAI KAI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N KAI . . . E 2 27.459 -9.02 277.356 1 171.42 ? N KAI 901 A 1 HETATM 2 C CD KAI . . . E 2 26.439 -9.094 278.384 1 171.29 ? CD KAI 901 A 1 HETATM 3 C CD1 KAI . . . E 2 25.982 -10.001 280.944 1 246.42 ? CD1 KAI 901 A 1 HETATM 4 C CD2 KAI . . . E 2 25.39 -12.294 280.356 1 293.86 ? CD2 KAI 901 A 1 HETATM 5 C CA KAI . . . E 2 28.017 -10.306 276.998 1 255.85 ? CA KAI 901 A 1 HETATM 6 C CB KAI . . . E 2 27.53 -11.238 278.093 1 270.94 ? CB KAI 901 A 1 HETATM 7 C CB1 KAI . . . E 2 28.579 -11.326 279.193 1 292.51 ? CB1 KAI 901 A 1 HETATM 8 C CG KAI . . . E 2 26.237 -10.592 278.576 1 213.68 ? CG KAI 901 A 1 HETATM 9 C CG1 KAI . . . E 2 29.711 -12.243 278.788 1 277.18 ? CG1 KAI 901 A 1 HETATM 10 C CG2 KAI . . . E 2 25.882 -10.921 280.001 1 272.43 ? CG2 KAI 901 A 1 HETATM 11 C C KAI . . . E 2 27.494 -10.764 275.672 1 275.84 ? C KAI 901 A 1 HETATM 12 O O KAI . . . E 2 27.268 -9.906 274.793 1 312.52 ? O KAI 901 A 1 HETATM 13 O OD1 KAI . . . E 2 30.754 -12.233 279.477 1 196.05 ? OD1 KAI 901 A 1 HETATM 14 O OD2 KAI . . . E 2 29.566 -12.982 277.791 1 320.93 ? OD2 KAI 901 A 1 HETATM 15 O OXT KAI . . . E 2 27.308 -11.986 275.492 1 209.31 ? OXT KAI 901 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #