data_4U39 # _model_server_result.job_id 7UKukjw6koRlHwTnuPycxA _model_server_result.datetime_utc '2024-12-21 16:12:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4u39 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GA","auth_seq_id":401}' # _entry.id 4U39 # _exptl.entry_id 4U39 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4U39 _cell.length_a 167.36 _cell.length_b 167.36 _cell.length_c 528.64 _cell.Z_PDB 108 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4U39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 ? dimeric 2 author_defined_assembly 5 ? dimeric 2 author_defined_assembly 6 ? dimeric 2 author_defined_assembly 7 ? dimeric 2 author_defined_assembly 8 ? dimeric 2 author_defined_assembly 9 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,J,S,T 1 1 B,K,U,V 2 1 C,L,W,X 3 1 D,M,Y,Z 4 1 E,N,AA 5 1 F,O,BA 6 1 G,P,CA,DA 7 1 H,Q,EA,FA 8 1 I,R,GA,HA 9 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 245 n n P O2 PO4 sing 246 n n P O3 PO4 sing 247 n n P O4 PO4 sing 248 n n # _atom_sites.entry_id 4U39 _atom_sites.fract_transf_matrix[1][1] 0.005975 _atom_sites.fract_transf_matrix[1][2] 0.00345 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0069 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 3 PO4 A 1 401 7 PO4 PO4 . T 3 PO4 A 1 402 13 PO4 PO4 . U 3 PO4 B 1 401 8 PO4 PO4 . V 3 PO4 B 1 402 20 PO4 PO4 . W 3 PO4 C 1 401 9 PO4 PO4 . X 3 PO4 C 1 402 18 PO4 PO4 . Y 3 PO4 D 1 401 16 PO4 PO4 . Z 3 PO4 D 1 402 17 PO4 PO4 . AA 3 PO4 E 1 401 11 PO4 PO4 . BA 3 PO4 F 1 401 14 PO4 PO4 . CA 3 PO4 G 1 401 2 PO4 PO4 . DA 3 PO4 G 1 402 15 PO4 PO4 . EA 3 PO4 H 1 401 4 PO4 PO4 . FA 3 PO4 H 1 402 19 PO4 PO4 . GA 3 PO4 I 1 401 5 PO4 PO4 . HA 3 PO4 I 1 402 6 PO4 PO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . GA 3 19.85 -32.539 -10.569 1 85.52 ? P PO4 401 I 1 HETATM 2 O O1 PO4 . . . GA 3 20.473 -31.792 -11.721 1 90.27 ? O1 PO4 401 I 1 HETATM 3 O O2 PO4 . . . GA 3 18.804 -33.512 -11.1 1 83.06 ? O2 PO4 401 I 1 HETATM 4 O O3 PO4 . . . GA 3 20.985 -33.249 -9.892 1 84.18 ? O3 PO4 401 I 1 HETATM 5 O O4 PO4 . . . GA 3 19.243 -31.585 -9.556 1 85.01 ? O4 PO4 401 I 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #